Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15435 and CA264_15440 are separated by 51 nucleotides CA264_15440 and CA264_15445 are separated by 50 nucleotides CA264_15445 and CA264_15450 are separated by 75 nucleotides
CA264_15435: CA264_15435 - hypothetical protein, at 3,617,959 to 3,618,948
_15435
CA264_15440: CA264_15440 - alpha/beta hydrolase, at 3,619,000 to 3,619,836
_15440
CA264_15445: CA264_15445 - hypothetical protein, at 3,619,887 to 3,621,572
_15445
CA264_15450: CA264_15450 - hypothetical protein, at 3,621,648 to 3,622,490
_15450
Position (kb)
3619
3620
3621
3622 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3618.897 kb on - strand at 3618.910 kb on + strand at 3618.911 kb on - strand at 3618.911 kb on - strand at 3618.911 kb on - strand at 3618.916 kb on + strand at 3618.930 kb on + strand at 3618.930 kb on + strand at 3618.930 kb on + strand at 3618.931 kb on - strand at 3618.972 kb on + strand at 3618.972 kb on + strand at 3618.977 kb on + strand at 3618.982 kb on + strand at 3619.071 kb on + strand at 3619.072 kb on - strand at 3619.140 kb on - strand, within CA264_15440 at 3619.196 kb on + strand, within CA264_15440 at 3619.217 kb on - strand, within CA264_15440 at 3619.217 kb on - strand, within CA264_15440 at 3619.269 kb on + strand, within CA264_15440 at 3619.318 kb on - strand, within CA264_15440 at 3619.346 kb on - strand, within CA264_15440 at 3619.346 kb on - strand, within CA264_15440 at 3619.350 kb on - strand, within CA264_15440 at 3619.352 kb on - strand, within CA264_15440 at 3619.371 kb on + strand, within CA264_15440 at 3619.405 kb on + strand, within CA264_15440 at 3619.480 kb on - strand, within CA264_15440 at 3619.485 kb on + strand, within CA264_15440 at 3619.486 kb on - strand, within CA264_15440 at 3619.530 kb on + strand, within CA264_15440 at 3619.530 kb on + strand, within CA264_15440 at 3619.530 kb on + strand, within CA264_15440 at 3619.530 kb on + strand, within CA264_15440 at 3619.530 kb on + strand, within CA264_15440 at 3619.531 kb on - strand, within CA264_15440 at 3619.532 kb on + strand, within CA264_15440 at 3619.533 kb on - strand, within CA264_15440 at 3619.533 kb on - strand, within CA264_15440 at 3619.547 kb on - strand, within CA264_15440 at 3619.553 kb on - strand, within CA264_15440 at 3619.571 kb on + strand, within CA264_15440 at 3619.604 kb on + strand, within CA264_15440 at 3619.604 kb on + strand, within CA264_15440 at 3619.605 kb on - strand, within CA264_15440 at 3619.605 kb on - strand, within CA264_15440 at 3619.611 kb on + strand, within CA264_15440 at 3619.611 kb on + strand, within CA264_15440 at 3619.639 kb on + strand, within CA264_15440 at 3619.640 kb on - strand, within CA264_15440 at 3619.641 kb on + strand, within CA264_15440 at 3619.641 kb on + strand, within CA264_15440 at 3619.642 kb on - strand, within CA264_15440 at 3619.661 kb on + strand, within CA264_15440 at 3619.689 kb on + strand, within CA264_15440 at 3619.691 kb on + strand, within CA264_15440 at 3619.691 kb on + strand, within CA264_15440 at 3619.824 kb on - strand at 3619.838 kb on + strand at 3619.838 kb on + strand at 3619.838 kb on + strand at 3619.838 kb on + strand at 3619.839 kb on - strand at 3619.839 kb on - strand at 3619.839 kb on - strand at 3619.839 kb on - strand at 3619.850 kb on + strand at 3619.900 kb on - strand at 3619.958 kb on + strand at 3619.959 kb on - strand at 3619.970 kb on - strand at 3619.981 kb on + strand at 3619.982 kb on - strand at 3619.982 kb on - strand at 3619.982 kb on - strand at 3620.047 kb on - strand at 3620.101 kb on + strand, within CA264_15445 at 3620.101 kb on + strand, within CA264_15445 at 3620.101 kb on + strand, within CA264_15445 at 3620.102 kb on - strand, within CA264_15445 at 3620.119 kb on + strand, within CA264_15445 at 3620.154 kb on - strand, within CA264_15445 at 3620.178 kb on + strand, within CA264_15445 at 3620.178 kb on + strand, within CA264_15445 at 3620.218 kb on - strand, within CA264_15445 at 3620.269 kb on - strand, within CA264_15445 at 3620.278 kb on - strand, within CA264_15445 at 3620.302 kb on + strand, within CA264_15445 at 3620.328 kb on + strand, within CA264_15445 at 3620.458 kb on - strand, within CA264_15445 at 3620.458 kb on - strand, within CA264_15445 at 3620.459 kb on + strand, within CA264_15445 at 3620.460 kb on - strand, within CA264_15445 at 3620.483 kb on + strand, within CA264_15445 at 3620.509 kb on + strand, within CA264_15445 at 3620.513 kb on - strand, within CA264_15445 at 3620.522 kb on + strand, within CA264_15445 at 3620.539 kb on + strand, within CA264_15445 at 3620.540 kb on - strand, within CA264_15445 at 3620.612 kb on - strand, within CA264_15445 at 3620.651 kb on + strand, within CA264_15445 at 3620.689 kb on + strand, within CA264_15445 at 3620.741 kb on + strand, within CA264_15445 at 3620.804 kb on + strand at 3620.804 kb on + strand, within CA264_15445 at 3620.804 kb on + strand, within CA264_15445 at 3620.815 kb on + strand, within CA264_15445 at 3620.816 kb on - strand, within CA264_15445 at 3620.861 kb on + strand, within CA264_15445 at 3620.938 kb on + strand, within CA264_15445 at 3620.957 kb on - strand, within CA264_15445 at 3621.072 kb on - strand, within CA264_15445 at 3621.077 kb on + strand, within CA264_15445 at 3621.078 kb on - strand, within CA264_15445 at 3621.078 kb on - strand, within CA264_15445 at 3621.079 kb on + strand, within CA264_15445 at 3621.146 kb on + strand, within CA264_15445 at 3621.147 kb on - strand, within CA264_15445 at 3621.287 kb on + strand, within CA264_15445 at 3621.313 kb on + strand, within CA264_15445 at 3621.316 kb on + strand, within CA264_15445 at 3621.316 kb on + strand, within CA264_15445 at 3621.327 kb on - strand, within CA264_15445 at 3621.327 kb on - strand, within CA264_15445 at 3621.347 kb on + strand, within CA264_15445 at 3621.367 kb on + strand, within CA264_15445 at 3621.370 kb on + strand, within CA264_15445 at 3621.402 kb on + strand, within CA264_15445 at 3621.403 kb on - strand, within CA264_15445 at 3621.403 kb on - strand, within CA264_15445 at 3621.403 kb on - strand, within CA264_15445 at 3621.404 kb on + strand at 3621.404 kb on + strand at 3621.405 kb on - strand at 3621.405 kb on - strand at 3621.405 kb on - strand at 3621.423 kb on + strand at 3621.423 kb on + strand at 3621.484 kb on + strand at 3621.519 kb on + strand at 3621.519 kb on + strand at 3621.519 kb on + strand at 3621.520 kb on - strand at 3621.547 kb on - strand at 3621.547 kb on - strand at 3621.547 kb on - strand at 3621.547 kb on - strand at 3621.578 kb on + strand at 3621.579 kb on - strand at 3621.579 kb on - strand at 3621.579 kb on - strand at 3621.604 kb on + strand at 3621.605 kb on - strand at 3621.644 kb on + strand at 3621.650 kb on - strand at 3621.650 kb on - strand at 3621.699 kb on - strand at 3621.704 kb on + strand at 3621.704 kb on + strand at 3621.726 kb on - strand at 3621.787 kb on + strand, within CA264_15450 at 3621.788 kb on - strand, within CA264_15450 at 3621.788 kb on - strand, within CA264_15450 at 3621.788 kb on - strand, within CA264_15450 at 3622.061 kb on + strand, within CA264_15450 at 3622.071 kb on - strand, within CA264_15450 at 3622.178 kb on + strand, within CA264_15450 at 3622.178 kb on + strand, within CA264_15450 at 3622.194 kb on + strand, within CA264_15450 at 3622.235 kb on + strand, within CA264_15450 at 3622.395 kb on + strand, within CA264_15450 at 3622.395 kb on + strand, within CA264_15450 at 3622.395 kb on + strand, within CA264_15450 at 3622.395 kb on + strand, within CA264_15450 at 3622.396 kb on - strand, within CA264_15450 at 3622.396 kb on - strand, within CA264_15450 at 3622.396 kb on - strand, within CA264_15450 at 3622.425 kb on + strand at 3622.425 kb on + strand at 3622.427 kb on + strand at 3622.427 kb on + strand at 3622.427 kb on + strand at 3622.428 kb on - strand at 3622.428 kb on - strand at 3622.432 kb on + strand at 3622.432 kb on + strand at 3622.433 kb on - strand at 3622.435 kb on + strand at 3622.444 kb on + strand at 3622.444 kb on + strand at 3622.445 kb on - strand at 3622.507 kb on + strand at 3622.507 kb on + strand at 3622.508 kb on - strand at 3622.519 kb on - strand at 3622.568 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 3,618,897 - -0.9 3,618,910 + -2.3 3,618,911 - +0.3 3,618,911 - -2.2 3,618,911 - -1.7 3,618,916 + -0.9 3,618,930 + +1.2 3,618,930 + -1.4 3,618,930 + -0.7 3,618,931 - +0.6 3,618,972 + -1.3 3,618,972 + -1.6 3,618,977 + -0.6 3,618,982 + -0.5 3,619,071 + -0.6 3,619,072 - +1.2 3,619,140 - CA264_15440 0.17 -0.4 3,619,196 + CA264_15440 0.23 +0.3 3,619,217 - CA264_15440 0.26 -0.1 3,619,217 - CA264_15440 0.26 -0.3 3,619,269 + CA264_15440 0.32 -1.3 3,619,318 - CA264_15440 0.38 -1.3 3,619,346 - CA264_15440 0.41 +0.7 3,619,346 - CA264_15440 0.41 -0.3 3,619,350 - CA264_15440 0.42 -0.5 3,619,352 - CA264_15440 0.42 -0.6 3,619,371 + CA264_15440 0.44 +0.0 3,619,405 + CA264_15440 0.48 -0.5 3,619,480 - CA264_15440 0.57 -1.2 3,619,485 + CA264_15440 0.58 -0.9 3,619,486 - CA264_15440 0.58 -0.6 3,619,530 + CA264_15440 0.63 +0.1 3,619,530 + CA264_15440 0.63 -0.1 3,619,530 + CA264_15440 0.63 -0.6 3,619,530 + CA264_15440 0.63 +0.3 3,619,530 + CA264_15440 0.63 +0.7 3,619,531 - CA264_15440 0.63 -1.4 3,619,532 + CA264_15440 0.64 -1.0 3,619,533 - CA264_15440 0.64 -0.1 3,619,533 - CA264_15440 0.64 +1.8 3,619,547 - CA264_15440 0.65 +0.6 3,619,553 - CA264_15440 0.66 -1.3 3,619,571 + CA264_15440 0.68 -1.0 3,619,604 + CA264_15440 0.72 +0.4 3,619,604 + CA264_15440 0.72 +1.0 3,619,605 - CA264_15440 0.72 -0.1 3,619,605 - CA264_15440 0.72 -0.3 3,619,611 + CA264_15440 0.73 +0.4 3,619,611 + CA264_15440 0.73 -0.7 3,619,639 + CA264_15440 0.76 -0.8 3,619,640 - CA264_15440 0.76 -1.2 3,619,641 + CA264_15440 0.77 +0.2 3,619,641 + CA264_15440 0.77 -0.8 3,619,642 - CA264_15440 0.77 +0.2 3,619,661 + CA264_15440 0.79 -3.7 3,619,689 + CA264_15440 0.82 -0.4 3,619,691 + CA264_15440 0.83 -1.4 3,619,691 + CA264_15440 0.83 +0.8 3,619,824 - +2.1 3,619,838 + +0.5 3,619,838 + +1.8 3,619,838 + +1.2 3,619,838 + +0.6 3,619,839 - -1.2 3,619,839 - -0.4 3,619,839 - +2.6 3,619,839 - +0.2 3,619,850 + -0.7 3,619,900 - -0.7 3,619,958 + -1.3 3,619,959 - +0.4 3,619,970 - -0.7 3,619,981 + -0.8 3,619,982 - +1.2 3,619,982 - -0.2 3,619,982 - +0.0 3,620,047 - -2.1 3,620,101 + CA264_15445 0.13 -0.6 3,620,101 + CA264_15445 0.13 -1.0 3,620,101 + CA264_15445 0.13 -0.7 3,620,102 - CA264_15445 0.13 -0.7 3,620,119 + CA264_15445 0.14 -0.9 3,620,154 - CA264_15445 0.16 +1.7 3,620,178 + CA264_15445 0.17 -1.0 3,620,178 + CA264_15445 0.17 -1.0 3,620,218 - CA264_15445 0.20 -1.0 3,620,269 - CA264_15445 0.23 -0.1 3,620,278 - CA264_15445 0.23 -0.6 3,620,302 + CA264_15445 0.25 +0.9 3,620,328 + CA264_15445 0.26 -1.0 3,620,458 - CA264_15445 0.34 -1.6 3,620,458 - CA264_15445 0.34 +1.2 3,620,459 + CA264_15445 0.34 +2.4 3,620,460 - CA264_15445 0.34 -1.8 3,620,483 + CA264_15445 0.35 -0.2 3,620,509 + CA264_15445 0.37 +0.2 3,620,513 - CA264_15445 0.37 -0.9 3,620,522 + CA264_15445 0.38 -0.5 3,620,539 + CA264_15445 0.39 -0.8 3,620,540 - CA264_15445 0.39 -0.8 3,620,612 - CA264_15445 0.43 -1.2 3,620,651 + CA264_15445 0.45 -0.3 3,620,689 + CA264_15445 0.48 -1.0 3,620,741 + CA264_15445 0.51 +0.5 3,620,804 + +0.6 3,620,804 + CA264_15445 0.54 +1.1 3,620,804 + CA264_15445 0.54 -2.3 3,620,815 + CA264_15445 0.55 -0.5 3,620,816 - CA264_15445 0.55 +0.4 3,620,861 + CA264_15445 0.58 -0.4 3,620,938 + CA264_15445 0.62 -0.6 3,620,957 - CA264_15445 0.63 -1.9 3,621,072 - CA264_15445 0.70 -0.9 3,621,077 + CA264_15445 0.71 -0.4 3,621,078 - CA264_15445 0.71 +1.2 3,621,078 - CA264_15445 0.71 +0.1 3,621,079 + CA264_15445 0.71 +0.9 3,621,146 + CA264_15445 0.75 -0.4 3,621,147 - CA264_15445 0.75 -0.9 3,621,287 + CA264_15445 0.83 -0.5 3,621,313 + CA264_15445 0.85 +1.0 3,621,316 + CA264_15445 0.85 +0.9 3,621,316 + CA264_15445 0.85 -0.7 3,621,327 - CA264_15445 0.85 -1.6 3,621,327 - CA264_15445 0.85 -0.4 3,621,347 + CA264_15445 0.87 -0.9 3,621,367 + CA264_15445 0.88 -1.1 3,621,370 + CA264_15445 0.88 -1.2 3,621,402 + CA264_15445 0.90 -0.1 3,621,403 - CA264_15445 0.90 +1.2 3,621,403 - CA264_15445 0.90 -1.3 3,621,403 - CA264_15445 0.90 -0.3 3,621,404 + -0.8 3,621,404 + +0.2 3,621,405 - -1.2 3,621,405 - -1.3 3,621,405 - -0.1 3,621,423 + -0.2 3,621,423 + -1.7 3,621,484 + +0.2 3,621,519 + +0.3 3,621,519 + -0.4 3,621,519 + -0.1 3,621,520 - +0.3 3,621,547 - -0.9 3,621,547 - -0.9 3,621,547 - -0.3 3,621,547 - +0.3 3,621,578 + -2.4 3,621,579 - -0.4 3,621,579 - -0.8 3,621,579 - -1.2 3,621,604 + -0.7 3,621,605 - -0.3 3,621,644 + -1.2 3,621,650 - -0.5 3,621,650 - -0.1 3,621,699 - -0.7 3,621,704 + -0.2 3,621,704 + +1.4 3,621,726 - -1.0 3,621,787 + CA264_15450 0.16 +1.9 3,621,788 - CA264_15450 0.17 -1.2 3,621,788 - CA264_15450 0.17 +0.9 3,621,788 - CA264_15450 0.17 -1.1 3,622,061 + CA264_15450 0.49 -1.1 3,622,071 - CA264_15450 0.50 -0.8 3,622,178 + CA264_15450 0.63 +1.2 3,622,178 + CA264_15450 0.63 -1.2 3,622,194 + CA264_15450 0.65 +0.2 3,622,235 + CA264_15450 0.70 +0.2 3,622,395 + CA264_15450 0.89 -0.3 3,622,395 + CA264_15450 0.89 +0.4 3,622,395 + CA264_15450 0.89 -1.3 3,622,395 + CA264_15450 0.89 -0.3 3,622,396 - CA264_15450 0.89 -0.4 3,622,396 - CA264_15450 0.89 -1.4 3,622,396 - CA264_15450 0.89 -0.6 3,622,425 + +0.1 3,622,425 + -0.7 3,622,427 + -1.3 3,622,427 + -2.2 3,622,427 + -0.2 3,622,428 - -1.4 3,622,428 - +2.0 3,622,432 + -1.5 3,622,432 + -1.2 3,622,433 - +1.6 3,622,435 + +0.4 3,622,444 + -0.7 3,622,444 + -1.4 3,622,445 - -0.0 3,622,507 + -0.5 3,622,507 + +1.2 3,622,508 - +0.1 3,622,519 - -0.1 3,622,568 - +0.7
Or see this region's nucleotide sequence