Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14985 and CA264_14990 are separated by 60 nucleotides CA264_14990 and CA264_14995 are separated by 325 nucleotides CA264_14995 and CA264_15000 are separated by 110 nucleotides CA264_15000 and CA264_15005 are separated by 143 nucleotides
CA264_14985: CA264_14985 - hypothetical protein, at 3,517,248 to 3,518,114
_14985
CA264_14990: CA264_14990 - integration host factor subunit beta, at 3,518,175 to 3,518,480
_14990
CA264_14995: CA264_14995 - A/G-specific adenine glycosylase, at 3,518,806 to 3,519,897
_14995
CA264_15000: CA264_15000 - single-stranded DNA-binding protein, at 3,520,008 to 3,520,487
_15000
CA264_15005: CA264_15005 - magnesium/cobalt efflux protein, at 3,520,631 to 3,521,884
_15005
Position (kb)
3518
3519
3520 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3517.860 kb on - strand, within CA264_14985 at 3518.040 kb on + strand at 3518.097 kb on + strand at 3518.592 kb on + strand at 3518.595 kb on + strand at 3518.802 kb on - strand at 3518.893 kb on - strand at 3518.906 kb on - strand at 3518.907 kb on + strand at 3518.907 kb on + strand at 3518.907 kb on + strand at 3518.907 kb on + strand at 3518.907 kb on + strand at 3518.907 kb on + strand at 3518.907 kb on + strand at 3518.908 kb on - strand at 3518.908 kb on - strand at 3518.908 kb on - strand at 3518.908 kb on - strand at 3518.965 kb on + strand, within CA264_14995 at 3519.058 kb on + strand, within CA264_14995 at 3519.133 kb on + strand, within CA264_14995 at 3519.153 kb on - strand, within CA264_14995 at 3519.170 kb on - strand, within CA264_14995 at 3519.380 kb on + strand, within CA264_14995 at 3519.381 kb on - strand, within CA264_14995 at 3519.515 kb on - strand, within CA264_14995 at 3519.547 kb on - strand, within CA264_14995 at 3519.561 kb on - strand, within CA264_14995 at 3519.756 kb on + strand, within CA264_14995 at 3519.757 kb on - strand, within CA264_14995 at 3519.804 kb on - strand at 3519.811 kb on + strand at 3519.862 kb on + strand at 3519.893 kb on + strand at 3519.893 kb on + strand at 3519.894 kb on - strand at 3519.947 kb on + strand at 3519.988 kb on + strand at 3519.989 kb on - strand at 3519.992 kb on - strand at 3519.992 kb on - strand at 3520.369 kb on - strand, within CA264_15000 at 3520.401 kb on + strand, within CA264_15000 at 3520.485 kb on + strand at 3520.486 kb on - strand at 3520.490 kb on + strand at 3520.490 kb on + strand at 3520.490 kb on + strand at 3520.491 kb on - strand at 3520.491 kb on - strand at 3520.491 kb on - strand at 3520.491 kb on - strand at 3520.522 kb on + strand at 3520.523 kb on - strand at 3520.548 kb on - strand at 3520.789 kb on + strand, within CA264_15005 at 3520.807 kb on - strand, within CA264_15005 at 3520.816 kb on + strand, within CA264_15005 at 3520.817 kb on - strand, within CA264_15005 at 3520.830 kb on - strand, within CA264_15005
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 3,517,860 - CA264_14985 0.71 -1.3 3,518,040 + -0.9 3,518,097 + -1.8 3,518,592 + -0.1 3,518,595 + -0.6 3,518,802 - -1.9 3,518,893 - -0.6 3,518,906 - -0.3 3,518,907 + +0.7 3,518,907 + -0.4 3,518,907 + -0.6 3,518,907 + -0.0 3,518,907 + -1.9 3,518,907 + -0.9 3,518,907 + +0.2 3,518,908 - -0.4 3,518,908 - +0.3 3,518,908 - -0.7 3,518,908 - -0.1 3,518,965 + CA264_14995 0.15 -2.4 3,519,058 + CA264_14995 0.23 -0.4 3,519,133 + CA264_14995 0.30 +0.8 3,519,153 - CA264_14995 0.32 -2.1 3,519,170 - CA264_14995 0.33 -1.2 3,519,380 + CA264_14995 0.53 -2.6 3,519,381 - CA264_14995 0.53 -0.1 3,519,515 - CA264_14995 0.65 -0.2 3,519,547 - CA264_14995 0.68 -0.4 3,519,561 - CA264_14995 0.69 +0.6 3,519,756 + CA264_14995 0.87 -2.5 3,519,757 - CA264_14995 0.87 +0.1 3,519,804 - +0.8 3,519,811 + -0.9 3,519,862 + -1.0 3,519,893 + +0.9 3,519,893 + -0.8 3,519,894 - -0.1 3,519,947 + +1.4 3,519,988 + -0.3 3,519,989 - -0.8 3,519,992 - -0.4 3,519,992 - +0.1 3,520,369 - CA264_15000 0.75 -1.5 3,520,401 + CA264_15000 0.82 -0.5 3,520,485 + -0.4 3,520,486 - -1.2 3,520,490 + -0.2 3,520,490 + -1.9 3,520,490 + +2.6 3,520,491 - -1.1 3,520,491 - -1.3 3,520,491 - -0.1 3,520,491 - -0.7 3,520,522 + +0.1 3,520,523 - -1.1 3,520,548 - -2.1 3,520,789 + CA264_15005 0.13 +0.0 3,520,807 - CA264_15005 0.14 -1.4 3,520,816 + CA264_15005 0.15 -0.8 3,520,817 - CA264_15005 0.15 -2.0 3,520,830 - CA264_15005 0.16 -0.2
Or see this region's nucleotide sequence