Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14040

Experiment: m.b. Cisplatin 0.035 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14040 and CA264_14045 are separated by 147 nucleotides CA264_14040: CA264_14040 - peptidase S41, at 3,287,985 to 3,289,433 _14040 CA264_14045: CA264_14045 - hypothetical protein, at 3,289,581 to 3,290,990 _14045 Position (kb) 3287 3288 3289 3290Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 3287.084 kb on - strandat 3287.101 kb on + strandat 3287.101 kb on + strandat 3287.105 kb on + strandat 3287.105 kb on + strandat 3287.106 kb on - strandat 3287.106 kb on - strandat 3287.108 kb on - strandat 3287.108 kb on - strandat 3287.163 kb on + strandat 3287.207 kb on + strandat 3287.208 kb on - strandat 3287.218 kb on + strandat 3287.273 kb on - strandat 3287.354 kb on + strandat 3287.355 kb on - strandat 3287.355 kb on - strandat 3287.355 kb on - strandat 3287.364 kb on - strandat 3287.364 kb on - strandat 3287.817 kb on + strandat 3287.845 kb on + strandat 3287.987 kb on - strandat 3288.026 kb on + strandat 3288.052 kb on + strandat 3288.121 kb on + strandat 3288.122 kb on - strandat 3288.126 kb on + strandat 3288.161 kb on - strand, within CA264_14040at 3288.161 kb on - strand, within CA264_14040at 3288.172 kb on - strand, within CA264_14040at 3288.174 kb on - strand, within CA264_14040at 3288.174 kb on - strand, within CA264_14040at 3288.177 kb on + strand, within CA264_14040at 3288.177 kb on + strand, within CA264_14040at 3288.178 kb on - strand, within CA264_14040at 3288.178 kb on - strand, within CA264_14040at 3288.272 kb on + strand, within CA264_14040at 3288.333 kb on + strand, within CA264_14040at 3288.334 kb on - strand, within CA264_14040at 3288.385 kb on + strand, within CA264_14040at 3288.407 kb on + strand, within CA264_14040at 3288.427 kb on + strand, within CA264_14040at 3288.427 kb on + strand, within CA264_14040at 3288.428 kb on - strand, within CA264_14040at 3288.428 kb on - strand, within CA264_14040at 3288.432 kb on - strand, within CA264_14040at 3288.465 kb on - strand, within CA264_14040at 3288.469 kb on - strand, within CA264_14040at 3288.469 kb on - strand, within CA264_14040at 3288.512 kb on + strand, within CA264_14040at 3288.515 kb on + strand, within CA264_14040at 3288.515 kb on + strand, within CA264_14040at 3288.516 kb on - strand, within CA264_14040at 3288.603 kb on + strand, within CA264_14040at 3288.674 kb on + strand, within CA264_14040at 3288.674 kb on + strand, within CA264_14040at 3288.680 kb on - strand, within CA264_14040at 3288.727 kb on - strand, within CA264_14040at 3288.956 kb on + strand, within CA264_14040at 3288.967 kb on + strand, within CA264_14040at 3289.000 kb on + strand, within CA264_14040at 3289.000 kb on + strand, within CA264_14040at 3289.018 kb on - strand, within CA264_14040at 3289.018 kb on - strand, within CA264_14040at 3289.054 kb on + strand, within CA264_14040at 3289.078 kb on - strand, within CA264_14040at 3289.078 kb on - strand, within CA264_14040at 3289.097 kb on + strand, within CA264_14040at 3289.161 kb on - strand, within CA264_14040at 3289.192 kb on + strand, within CA264_14040at 3289.192 kb on + strand, within CA264_14040at 3289.193 kb on - strand, within CA264_14040at 3289.195 kb on - strand, within CA264_14040at 3289.199 kb on + strand, within CA264_14040at 3289.234 kb on - strand, within CA264_14040at 3289.256 kb on + strand, within CA264_14040at 3289.349 kb on + strandat 3289.349 kb on + strandat 3289.401 kb on + strandat 3289.402 kb on - strandat 3289.402 kb on - strandat 3289.493 kb on - strandat 3289.493 kb on - strandat 3289.507 kb on - strandat 3289.521 kb on + strandat 3289.522 kb on - strandat 3289.553 kb on - strandat 3289.582 kb on + strandat 3289.583 kb on - strandat 3289.584 kb on + strandat 3289.627 kb on + strandat 3289.628 kb on - strandat 3289.664 kb on - strandat 3289.775 kb on + strand, within CA264_14045at 3289.776 kb on - strand, within CA264_14045at 3289.786 kb on + strand, within CA264_14045at 3289.813 kb on + strand, within CA264_14045at 3289.814 kb on - strand, within CA264_14045at 3289.831 kb on + strand, within CA264_14045at 3289.832 kb on - strand, within CA264_14045at 3289.844 kb on - strand, within CA264_14045at 3289.860 kb on + strand, within CA264_14045at 3289.860 kb on + strand, within CA264_14045at 3289.915 kb on + strand, within CA264_14045at 3290.001 kb on - strand, within CA264_14045at 3290.002 kb on + strand, within CA264_14045at 3290.002 kb on + strand, within CA264_14045at 3290.006 kb on + strand, within CA264_14045at 3290.007 kb on - strand, within CA264_14045at 3290.057 kb on + strand, within CA264_14045at 3290.092 kb on - strand, within CA264_14045at 3290.108 kb on + strand, within CA264_14045at 3290.109 kb on - strand, within CA264_14045at 3290.117 kb on - strand, within CA264_14045at 3290.135 kb on + strand, within CA264_14045at 3290.189 kb on - strand, within CA264_14045at 3290.207 kb on + strand, within CA264_14045at 3290.210 kb on - strand, within CA264_14045at 3290.212 kb on + strand, within CA264_14045at 3290.286 kb on + strand, within CA264_14045at 3290.286 kb on + strand, within CA264_14045at 3290.287 kb on - strand, within CA264_14045at 3290.287 kb on - strand, within CA264_14045at 3290.287 kb on - strand, within CA264_14045at 3290.287 kb on - strand, within CA264_14045at 3290.395 kb on + strand, within CA264_14045at 3290.398 kb on + strand, within CA264_14045at 3290.399 kb on - strand, within CA264_14045at 3290.408 kb on - strand, within CA264_14045

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml
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3,287,084 - +1.1
3,287,101 + -1.6
3,287,101 + -1.1
3,287,105 + +0.1
3,287,105 + -2.2
3,287,106 - -1.7
3,287,106 - -0.4
3,287,108 - +4.6
3,287,108 - +0.3
3,287,163 + -1.0
3,287,207 + -0.4
3,287,208 - +0.4
3,287,218 + -0.5
3,287,273 - -1.4
3,287,354 + -0.6
3,287,355 - -0.4
3,287,355 - -0.3
3,287,355 - -0.9
3,287,364 - -1.1
3,287,364 - -0.6
3,287,817 + +1.0
3,287,845 + +5.3
3,287,987 - +0.0
3,288,026 + -0.8
3,288,052 + +0.4
3,288,121 + -2.2
3,288,122 - -1.5
3,288,126 + +0.4
3,288,161 - CA264_14040 0.12 -1.4
3,288,161 - CA264_14040 0.12 -0.7
3,288,172 - CA264_14040 0.13 -0.1
3,288,174 - CA264_14040 0.13 -1.2
3,288,174 - CA264_14040 0.13 -0.7
3,288,177 + CA264_14040 0.13 +0.3
3,288,177 + CA264_14040 0.13 -1.3
3,288,178 - CA264_14040 0.13 +0.3
3,288,178 - CA264_14040 0.13 +2.6
3,288,272 + CA264_14040 0.20 -0.4
3,288,333 + CA264_14040 0.24 -0.4
3,288,334 - CA264_14040 0.24 -0.8
3,288,385 + CA264_14040 0.28 +1.3
3,288,407 + CA264_14040 0.29 +0.1
3,288,427 + CA264_14040 0.31 +1.1
3,288,427 + CA264_14040 0.31 +0.4
3,288,428 - CA264_14040 0.31 +0.5
3,288,428 - CA264_14040 0.31 -1.1
3,288,432 - CA264_14040 0.31 -0.8
3,288,465 - CA264_14040 0.33 -0.6
3,288,469 - CA264_14040 0.33 -0.6
3,288,469 - CA264_14040 0.33 +0.9
3,288,512 + CA264_14040 0.36 -1.7
3,288,515 + CA264_14040 0.37 +2.6
3,288,515 + CA264_14040 0.37 +1.6
3,288,516 - CA264_14040 0.37 +1.4
3,288,603 + CA264_14040 0.43 -1.0
3,288,674 + CA264_14040 0.48 -0.1
3,288,674 + CA264_14040 0.48 -1.2
3,288,680 - CA264_14040 0.48 +1.9
3,288,727 - CA264_14040 0.51 +0.5
3,288,956 + CA264_14040 0.67 +1.0
3,288,967 + CA264_14040 0.68 -0.6
3,289,000 + CA264_14040 0.70 -0.0
3,289,000 + CA264_14040 0.70 -1.1
3,289,018 - CA264_14040 0.71 +2.3
3,289,018 - CA264_14040 0.71 -1.0
3,289,054 + CA264_14040 0.74 +0.0
3,289,078 - CA264_14040 0.75 -0.8
3,289,078 - CA264_14040 0.75 -0.4
3,289,097 + CA264_14040 0.77 -1.3
3,289,161 - CA264_14040 0.81 -0.3
3,289,192 + CA264_14040 0.83 -1.0
3,289,192 + CA264_14040 0.83 +1.7
3,289,193 - CA264_14040 0.83 -0.1
3,289,195 - CA264_14040 0.84 -0.7
3,289,199 + CA264_14040 0.84 -0.1
3,289,234 - CA264_14040 0.86 -0.6
3,289,256 + CA264_14040 0.88 +2.1
3,289,349 + -0.5
3,289,349 + -0.3
3,289,401 + -0.9
3,289,402 - -1.0
3,289,402 - +1.4
3,289,493 - +1.2
3,289,493 - -0.0
3,289,507 - -0.5
3,289,521 + -0.3
3,289,522 - -0.2
3,289,553 - -2.2
3,289,582 + +1.1
3,289,583 - -1.4
3,289,584 + -0.1
3,289,627 + -1.0
3,289,628 - +3.0
3,289,664 - -1.0
3,289,775 + CA264_14045 0.14 -2.4
3,289,776 - CA264_14045 0.14 -1.3
3,289,786 + CA264_14045 0.15 -0.1
3,289,813 + CA264_14045 0.16 +0.8
3,289,814 - CA264_14045 0.17 +0.1
3,289,831 + CA264_14045 0.18 -0.8
3,289,832 - CA264_14045 0.18 -0.6
3,289,844 - CA264_14045 0.19 -0.4
3,289,860 + CA264_14045 0.20 -1.5
3,289,860 + CA264_14045 0.20 -0.0
3,289,915 + CA264_14045 0.24 -1.6
3,290,001 - CA264_14045 0.30 +0.3
3,290,002 + CA264_14045 0.30 -0.5
3,290,002 + CA264_14045 0.30 -0.2
3,290,006 + CA264_14045 0.30 -1.7
3,290,007 - CA264_14045 0.30 +0.0
3,290,057 + CA264_14045 0.34 -1.7
3,290,092 - CA264_14045 0.36 +0.1
3,290,108 + CA264_14045 0.37 +0.5
3,290,109 - CA264_14045 0.37 +1.3
3,290,117 - CA264_14045 0.38 -0.1
3,290,135 + CA264_14045 0.39 +1.8
3,290,189 - CA264_14045 0.43 +4.5
3,290,207 + CA264_14045 0.44 +1.2
3,290,210 - CA264_14045 0.45 -0.6
3,290,212 + CA264_14045 0.45 -2.1
3,290,286 + CA264_14045 0.50 -1.0
3,290,286 + CA264_14045 0.50 +1.5
3,290,287 - CA264_14045 0.50 -1.1
3,290,287 - CA264_14045 0.50 +0.5
3,290,287 - CA264_14045 0.50 -0.4
3,290,287 - CA264_14045 0.50 -0.8
3,290,395 + CA264_14045 0.58 -0.4
3,290,398 + CA264_14045 0.58 -0.5
3,290,399 - CA264_14045 0.58 -0.6
3,290,408 - CA264_14045 0.59 -1.3

Or see this region's nucleotide sequence