Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12695 and CA264_12700 are separated by 89 nucleotides CA264_12700 and CA264_12705 are separated by 56 nucleotides CA264_12705 and CA264_12710 are separated by 33 nucleotides CA264_12710 and CA264_12715 are separated by 148 nucleotides
CA264_12695: CA264_12695 - phosphatase PAP2 family protein, at 2,960,701 to 2,961,420
_12695
CA264_12700: CA264_12700 - RNA 2',3'-cyclic phosphodiesterase, at 2,961,510 to 2,962,055
_12700
CA264_12705: CA264_12705 - decaheme cytochrome c MtrA, at 2,962,112 to 2,962,603
_12705
CA264_12710: CA264_12710 - SAM-dependent methyltransferase, at 2,962,637 to 2,963,314
_12710
CA264_12715: CA264_12715 - peptidase M61, at 2,963,463 to 2,965,295
_12715
Position (kb)
2962
2963 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2961.146 kb on + strand, within CA264_12695 at 2961.146 kb on + strand, within CA264_12695 at 2961.147 kb on - strand, within CA264_12695 at 2961.147 kb on - strand, within CA264_12695 at 2961.149 kb on + strand, within CA264_12695 at 2961.216 kb on + strand, within CA264_12695 at 2961.330 kb on + strand, within CA264_12695 at 2961.331 kb on - strand, within CA264_12695 at 2961.359 kb on - strand at 2961.402 kb on + strand at 2961.420 kb on + strand at 2961.420 kb on + strand at 2961.420 kb on + strand at 2961.420 kb on + strand at 2961.420 kb on + strand at 2961.420 kb on + strand at 2961.421 kb on - strand at 2961.421 kb on - strand at 2961.440 kb on + strand at 2961.440 kb on + strand at 2961.495 kb on - strand at 2961.495 kb on - strand at 2961.497 kb on + strand at 2961.498 kb on - strand at 2961.571 kb on + strand, within CA264_12700 at 2961.614 kb on + strand, within CA264_12700 at 2961.683 kb on - strand, within CA264_12700 at 2961.698 kb on - strand, within CA264_12700 at 2961.728 kb on + strand, within CA264_12700 at 2961.749 kb on - strand, within CA264_12700 at 2961.749 kb on - strand, within CA264_12700 at 2961.862 kb on + strand, within CA264_12700 at 2961.863 kb on - strand, within CA264_12700 at 2961.890 kb on + strand, within CA264_12700 at 2961.891 kb on - strand, within CA264_12700 at 2962.078 kb on + strand at 2962.081 kb on + strand at 2962.081 kb on + strand at 2962.107 kb on + strand at 2962.108 kb on - strand at 2962.138 kb on - strand at 2962.264 kb on - strand, within CA264_12705 at 2962.266 kb on - strand, within CA264_12705 at 2962.299 kb on + strand, within CA264_12705 at 2962.322 kb on + strand, within CA264_12705 at 2962.322 kb on + strand, within CA264_12705 at 2962.322 kb on + strand, within CA264_12705 at 2962.360 kb on - strand, within CA264_12705 at 2962.553 kb on + strand, within CA264_12705 at 2962.553 kb on + strand, within CA264_12705 at 2962.555 kb on + strand at 2962.582 kb on - strand at 2962.582 kb on - strand at 2962.633 kb on + strand at 2962.633 kb on + strand at 2962.663 kb on + strand at 2962.707 kb on - strand, within CA264_12710 at 2962.707 kb on - strand, within CA264_12710 at 2962.979 kb on - strand, within CA264_12710 at 2962.980 kb on + strand, within CA264_12710 at 2962.981 kb on - strand, within CA264_12710 at 2963.144 kb on + strand, within CA264_12710 at 2963.195 kb on + strand, within CA264_12710 at 2963.196 kb on - strand, within CA264_12710 at 2963.365 kb on - strand at 2963.431 kb on + strand at 2963.432 kb on - strand at 2963.432 kb on - strand at 2963.435 kb on + strand at 2963.436 kb on - strand at 2963.448 kb on - strand at 2963.545 kb on - strand at 2963.587 kb on + strand at 2963.593 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 2,961,146 + CA264_12695 0.62 +1.6 2,961,146 + CA264_12695 0.62 -0.2 2,961,147 - CA264_12695 0.62 +0.9 2,961,147 - CA264_12695 0.62 -0.2 2,961,149 + CA264_12695 0.62 +0.4 2,961,216 + CA264_12695 0.72 -1.3 2,961,330 + CA264_12695 0.87 +0.8 2,961,331 - CA264_12695 0.88 -0.2 2,961,359 - +0.3 2,961,402 + -0.1 2,961,420 + +0.9 2,961,420 + -1.0 2,961,420 + +1.4 2,961,420 + +1.0 2,961,420 + -0.3 2,961,420 + +0.7 2,961,421 - -0.9 2,961,421 - +0.9 2,961,440 + -2.0 2,961,440 + -2.1 2,961,495 - -0.4 2,961,495 - -0.4 2,961,497 + -0.1 2,961,498 - -0.8 2,961,571 + CA264_12700 0.11 -2.1 2,961,614 + CA264_12700 0.19 -0.2 2,961,683 - CA264_12700 0.32 +0.7 2,961,698 - CA264_12700 0.34 +0.6 2,961,728 + CA264_12700 0.40 -0.7 2,961,749 - CA264_12700 0.44 -0.4 2,961,749 - CA264_12700 0.44 -1.0 2,961,862 + CA264_12700 0.64 +0.2 2,961,863 - CA264_12700 0.65 -1.0 2,961,890 + CA264_12700 0.70 +0.2 2,961,891 - CA264_12700 0.70 +0.9 2,962,078 + -1.6 2,962,081 + +0.9 2,962,081 + +0.5 2,962,107 + -1.4 2,962,108 - +3.5 2,962,138 - -0.6 2,962,264 - CA264_12705 0.31 -1.0 2,962,266 - CA264_12705 0.31 -1.6 2,962,299 + CA264_12705 0.38 -0.2 2,962,322 + CA264_12705 0.43 -0.0 2,962,322 + CA264_12705 0.43 +1.7 2,962,322 + CA264_12705 0.43 +1.2 2,962,360 - CA264_12705 0.50 -2.2 2,962,553 + CA264_12705 0.90 -0.3 2,962,553 + CA264_12705 0.90 +0.7 2,962,555 + +0.4 2,962,582 - +1.0 2,962,582 - -1.8 2,962,633 + -0.3 2,962,633 + -0.1 2,962,663 + +0.7 2,962,707 - CA264_12710 0.10 -0.0 2,962,707 - CA264_12710 0.10 -0.8 2,962,979 - CA264_12710 0.50 +1.1 2,962,980 + CA264_12710 0.51 +0.0 2,962,981 - CA264_12710 0.51 +0.9 2,963,144 + CA264_12710 0.75 -1.3 2,963,195 + CA264_12710 0.82 -0.3 2,963,196 - CA264_12710 0.82 -1.7 2,963,365 - -0.9 2,963,431 + -0.2 2,963,432 - -0.4 2,963,432 - -0.6 2,963,435 + -0.2 2,963,436 - -0.5 2,963,448 - +0.7 2,963,545 - +1.2 2,963,587 + +1.1 2,963,593 + -1.7
Or see this region's nucleotide sequence