Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11735

Experiment: m.b. Cisplatin 0.035 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11730 and CA264_11735 are separated by 271 nucleotidesCA264_11735 and CA264_11740 are separated by 293 nucleotides CA264_11730: CA264_11730 - hypothetical protein, at 2,731,441 to 2,732,391 _11730 CA264_11735: CA264_11735 - hypothetical protein, at 2,732,663 to 2,733,385 _11735 CA264_11740: CA264_11740 - hypothetical protein, at 2,733,679 to 2,735,715 _11740 Position (kb) 2732 2733 2734Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 2731.694 kb on - strand, within CA264_11730at 2731.694 kb on - strand, within CA264_11730at 2731.695 kb on + strand, within CA264_11730at 2731.727 kb on - strand, within CA264_11730at 2731.778 kb on - strand, within CA264_11730at 2731.793 kb on - strand, within CA264_11730at 2731.873 kb on + strand, within CA264_11730at 2731.930 kb on - strand, within CA264_11730at 2731.935 kb on - strand, within CA264_11730at 2731.939 kb on + strand, within CA264_11730at 2731.940 kb on - strand, within CA264_11730at 2732.037 kb on + strand, within CA264_11730at 2732.132 kb on - strand, within CA264_11730at 2732.181 kb on + strand, within CA264_11730at 2732.187 kb on - strand, within CA264_11730at 2732.267 kb on + strand, within CA264_11730at 2732.329 kb on + strandat 2732.330 kb on - strandat 2732.330 kb on - strandat 2732.342 kb on - strandat 2732.503 kb on + strandat 2732.504 kb on - strandat 2732.528 kb on + strandat 2732.529 kb on - strandat 2732.529 kb on - strandat 2732.573 kb on + strandat 2732.574 kb on - strandat 2732.598 kb on + strandat 2732.628 kb on + strandat 2732.628 kb on + strandat 2732.628 kb on + strandat 2732.628 kb on + strandat 2732.628 kb on + strandat 2732.628 kb on + strandat 2732.628 kb on + strandat 2732.629 kb on - strandat 2732.629 kb on - strandat 2732.629 kb on - strandat 2732.664 kb on + strandat 2732.665 kb on - strandat 2732.719 kb on + strandat 2732.720 kb on - strandat 2732.771 kb on + strand, within CA264_11735at 2732.771 kb on + strand, within CA264_11735at 2732.772 kb on - strand, within CA264_11735at 2732.774 kb on + strand, within CA264_11735at 2732.775 kb on - strand, within CA264_11735at 2732.775 kb on - strand, within CA264_11735at 2732.800 kb on - strand, within CA264_11735at 2732.801 kb on + strand, within CA264_11735at 2732.802 kb on - strand, within CA264_11735at 2732.802 kb on - strand, within CA264_11735at 2732.849 kb on + strand, within CA264_11735at 2732.849 kb on + strand, within CA264_11735at 2732.850 kb on - strand, within CA264_11735at 2732.850 kb on - strand, within CA264_11735at 2732.854 kb on - strand, within CA264_11735at 2733.036 kb on + strand, within CA264_11735at 2733.037 kb on - strand, within CA264_11735at 2733.092 kb on - strand, within CA264_11735at 2733.136 kb on + strand, within CA264_11735at 2733.137 kb on - strand, within CA264_11735at 2733.137 kb on - strand, within CA264_11735at 2733.145 kb on + strand, within CA264_11735at 2733.145 kb on + strand, within CA264_11735at 2733.146 kb on - strand, within CA264_11735at 2733.154 kb on + strand, within CA264_11735at 2733.154 kb on + strand, within CA264_11735at 2733.154 kb on + strand, within CA264_11735at 2733.155 kb on - strand, within CA264_11735at 2733.277 kb on + strand, within CA264_11735at 2733.281 kb on - strand, within CA264_11735at 2733.281 kb on - strand, within CA264_11735at 2733.390 kb on + strandat 2733.390 kb on + strandat 2733.390 kb on + strandat 2733.390 kb on + strandat 2733.391 kb on - strandat 2733.393 kb on + strandat 2733.394 kb on - strandat 2733.394 kb on - strandat 2733.433 kb on + strandat 2733.434 kb on - strandat 2733.456 kb on - strandat 2733.498 kb on + strandat 2733.519 kb on + strandat 2733.520 kb on - strandat 2733.524 kb on + strandat 2733.562 kb on + strandat 2733.563 kb on - strandat 2733.567 kb on + strandat 2733.567 kb on + strandat 2733.568 kb on - strandat 2733.568 kb on - strandat 2733.600 kb on + strandat 2733.600 kb on + strandat 2733.625 kb on + strandat 2733.629 kb on + strandat 2733.638 kb on + strandat 2733.652 kb on + strandat 2733.659 kb on - strandat 2733.729 kb on + strandat 2733.730 kb on - strandat 2733.730 kb on - strandat 2733.733 kb on + strandat 2733.796 kb on - strandat 2733.828 kb on + strandat 2733.969 kb on + strand, within CA264_11740at 2733.969 kb on + strand, within CA264_11740at 2733.970 kb on - strand, within CA264_11740at 2733.992 kb on - strand, within CA264_11740at 2734.069 kb on - strand, within CA264_11740at 2734.070 kb on + strand, within CA264_11740at 2734.071 kb on - strand, within CA264_11740at 2734.083 kb on + strand, within CA264_11740at 2734.084 kb on - strand, within CA264_11740at 2734.098 kb on + strand, within CA264_11740at 2734.170 kb on + strand, within CA264_11740at 2734.171 kb on - strand, within CA264_11740at 2734.188 kb on + strand, within CA264_11740at 2734.191 kb on - strand, within CA264_11740at 2734.191 kb on - strand, within CA264_11740at 2734.211 kb on + strand, within CA264_11740at 2734.211 kb on + strand, within CA264_11740at 2734.212 kb on - strand, within CA264_11740at 2734.212 kb on - strand, within CA264_11740at 2734.212 kb on - strand, within CA264_11740at 2734.212 kb on - strand, within CA264_11740at 2734.212 kb on - strand, within CA264_11740at 2734.212 kb on - strand, within CA264_11740at 2734.217 kb on - strand, within CA264_11740at 2734.221 kb on + strand, within CA264_11740at 2734.222 kb on - strand, within CA264_11740at 2734.231 kb on - strand, within CA264_11740at 2734.255 kb on + strand, within CA264_11740at 2734.302 kb on - strand, within CA264_11740at 2734.353 kb on + strand, within CA264_11740at 2734.358 kb on - strand, within CA264_11740

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml
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2,731,694 - CA264_11730 0.27 -0.9
2,731,694 - CA264_11730 0.27 -1.0
2,731,695 + CA264_11730 0.27 -1.2
2,731,727 - CA264_11730 0.30 +1.4
2,731,778 - CA264_11730 0.35 +0.3
2,731,793 - CA264_11730 0.37 +0.1
2,731,873 + CA264_11730 0.45 +1.1
2,731,930 - CA264_11730 0.51 +1.3
2,731,935 - CA264_11730 0.52 -0.5
2,731,939 + CA264_11730 0.52 -0.1
2,731,940 - CA264_11730 0.52 +0.8
2,732,037 + CA264_11730 0.63 -0.5
2,732,132 - CA264_11730 0.73 +1.4
2,732,181 + CA264_11730 0.78 +0.0
2,732,187 - CA264_11730 0.78 -1.1
2,732,267 + CA264_11730 0.87 -0.5
2,732,329 + -0.2
2,732,330 - +1.7
2,732,330 - -1.3
2,732,342 - +0.4
2,732,503 + -0.7
2,732,504 - +0.3
2,732,528 + -0.5
2,732,529 - -1.2
2,732,529 - -0.1
2,732,573 + -0.5
2,732,574 - -0.4
2,732,598 + +3.4
2,732,628 + -0.3
2,732,628 + -1.0
2,732,628 + +1.4
2,732,628 + -1.8
2,732,628 + +1.0
2,732,628 + -1.0
2,732,628 + -1.6
2,732,629 - -0.9
2,732,629 - -1.1
2,732,629 - -0.6
2,732,664 + +1.1
2,732,665 - +0.6
2,732,719 + -0.1
2,732,720 - -1.6
2,732,771 + CA264_11735 0.15 -0.2
2,732,771 + CA264_11735 0.15 -0.5
2,732,772 - CA264_11735 0.15 +0.4
2,732,774 + CA264_11735 0.15 -0.3
2,732,775 - CA264_11735 0.15 +0.6
2,732,775 - CA264_11735 0.15 -2.1
2,732,800 - CA264_11735 0.19 -0.5
2,732,801 + CA264_11735 0.19 -1.4
2,732,802 - CA264_11735 0.19 -0.6
2,732,802 - CA264_11735 0.19 -2.1
2,732,849 + CA264_11735 0.26 +2.0
2,732,849 + CA264_11735 0.26 +5.0
2,732,850 - CA264_11735 0.26 -0.9
2,732,850 - CA264_11735 0.26 -1.1
2,732,854 - CA264_11735 0.26 +0.6
2,733,036 + CA264_11735 0.52 -1.6
2,733,037 - CA264_11735 0.52 -0.8
2,733,092 - CA264_11735 0.59 -1.7
2,733,136 + CA264_11735 0.65 -1.1
2,733,137 - CA264_11735 0.66 -1.6
2,733,137 - CA264_11735 0.66 +0.3
2,733,145 + CA264_11735 0.67 -0.6
2,733,145 + CA264_11735 0.67 -0.3
2,733,146 - CA264_11735 0.67 -1.6
2,733,154 + CA264_11735 0.68 -0.9
2,733,154 + CA264_11735 0.68 -0.6
2,733,154 + CA264_11735 0.68 +0.9
2,733,155 - CA264_11735 0.68 -0.8
2,733,277 + CA264_11735 0.85 -2.2
2,733,281 - CA264_11735 0.85 +1.9
2,733,281 - CA264_11735 0.85 +0.8
2,733,390 + -1.8
2,733,390 + +1.0
2,733,390 + +0.6
2,733,390 + -1.6
2,733,391 - -0.3
2,733,393 + -0.7
2,733,394 - -1.1
2,733,394 - -1.3
2,733,433 + -1.7
2,733,434 - -1.3
2,733,456 - -1.4
2,733,498 + -1.0
2,733,519 + -1.2
2,733,520 - +1.1
2,733,524 + +2.1
2,733,562 + -2.0
2,733,563 - -0.4
2,733,567 + -0.1
2,733,567 + -1.1
2,733,568 - -1.4
2,733,568 - -0.8
2,733,600 + -1.0
2,733,600 + -1.5
2,733,625 + -0.9
2,733,629 + +1.2
2,733,638 + +4.3
2,733,652 + +0.5
2,733,659 - -0.3
2,733,729 + -1.4
2,733,730 - -0.2
2,733,730 - +0.6
2,733,733 + +1.4
2,733,796 - -1.5
2,733,828 + +0.4
2,733,969 + CA264_11740 0.14 -0.6
2,733,969 + CA264_11740 0.14 +0.9
2,733,970 - CA264_11740 0.14 -0.7
2,733,992 - CA264_11740 0.15 +5.4
2,734,069 - CA264_11740 0.19 -2.5
2,734,070 + CA264_11740 0.19 +1.0
2,734,071 - CA264_11740 0.19 -0.1
2,734,083 + CA264_11740 0.20 -0.8
2,734,084 - CA264_11740 0.20 +2.7
2,734,098 + CA264_11740 0.21 +2.2
2,734,170 + CA264_11740 0.24 -0.7
2,734,171 - CA264_11740 0.24 +1.4
2,734,188 + CA264_11740 0.25 -1.8
2,734,191 - CA264_11740 0.25 +0.9
2,734,191 - CA264_11740 0.25 -1.1
2,734,211 + CA264_11740 0.26 -0.6
2,734,211 + CA264_11740 0.26 +1.6
2,734,212 - CA264_11740 0.26 -2.2
2,734,212 - CA264_11740 0.26 -0.4
2,734,212 - CA264_11740 0.26 +0.7
2,734,212 - CA264_11740 0.26 -1.2
2,734,212 - CA264_11740 0.26 -2.4
2,734,212 - CA264_11740 0.26 +0.4
2,734,217 - CA264_11740 0.26 +0.3
2,734,221 + CA264_11740 0.27 -0.8
2,734,222 - CA264_11740 0.27 -2.1
2,734,231 - CA264_11740 0.27 -0.4
2,734,255 + CA264_11740 0.28 -0.8
2,734,302 - CA264_11740 0.31 -0.4
2,734,353 + CA264_11740 0.33 +1.6
2,734,358 - CA264_11740 0.33 +1.1

Or see this region's nucleotide sequence