Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09155 and CA264_09160 are separated by 83 nucleotides CA264_09160 and CA264_09165 are separated by 142 nucleotides CA264_09165 and CA264_09170 are separated by 168 nucleotides
CA264_09155: CA264_09155 - anion permease, at 2,146,311 to 2,147,111
_09155
CA264_09160: CA264_09160 - MBL fold metallo-hydrolase, at 2,147,195 to 2,148,607
_09160
CA264_09165: CA264_09165 - AraC family transcriptional regulator, at 2,148,750 to 2,149,328
_09165
CA264_09170: CA264_09170 - hypothetical protein, at 2,149,497 to 2,149,922
_09170
Position (kb)
2147
2148
2149 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2146.203 kb on - strand at 2146.203 kb on - strand at 2146.253 kb on - strand at 2146.260 kb on - strand at 2146.274 kb on - strand at 2146.280 kb on - strand at 2146.284 kb on + strand at 2146.383 kb on - strand at 2146.384 kb on + strand at 2146.384 kb on + strand at 2146.385 kb on - strand at 2146.385 kb on - strand at 2146.385 kb on - strand at 2146.389 kb on - strand at 2146.393 kb on + strand, within CA264_09155 at 2146.444 kb on - strand, within CA264_09155 at 2146.575 kb on + strand, within CA264_09155 at 2146.579 kb on + strand, within CA264_09155 at 2146.580 kb on - strand, within CA264_09155 at 2146.608 kb on - strand, within CA264_09155 at 2146.788 kb on - strand, within CA264_09155 at 2146.798 kb on + strand, within CA264_09155 at 2146.894 kb on + strand, within CA264_09155 at 2146.921 kb on + strand, within CA264_09155 at 2146.938 kb on + strand, within CA264_09155 at 2146.938 kb on + strand, within CA264_09155 at 2146.939 kb on - strand, within CA264_09155 at 2146.939 kb on - strand, within CA264_09155 at 2146.943 kb on + strand, within CA264_09155 at 2147.080 kb on - strand at 2147.080 kb on - strand at 2147.202 kb on + strand at 2147.240 kb on + strand at 2147.240 kb on + strand at 2147.244 kb on - strand at 2147.266 kb on - strand at 2147.335 kb on + strand at 2147.335 kb on + strand at 2147.335 kb on + strand at 2147.335 kb on + strand at 2147.339 kb on + strand, within CA264_09160 at 2147.340 kb on - strand, within CA264_09160 at 2147.500 kb on + strand, within CA264_09160 at 2147.500 kb on + strand, within CA264_09160 at 2147.501 kb on - strand, within CA264_09160 at 2147.501 kb on - strand, within CA264_09160 at 2147.543 kb on + strand, within CA264_09160 at 2147.543 kb on + strand, within CA264_09160 at 2147.543 kb on + strand, within CA264_09160 at 2147.544 kb on - strand, within CA264_09160 at 2147.573 kb on + strand, within CA264_09160 at 2147.669 kb on + strand, within CA264_09160 at 2147.669 kb on + strand, within CA264_09160 at 2147.814 kb on - strand, within CA264_09160 at 2147.872 kb on - strand, within CA264_09160 at 2147.938 kb on + strand, within CA264_09160 at 2147.938 kb on + strand, within CA264_09160 at 2147.938 kb on + strand, within CA264_09160 at 2147.938 kb on + strand, within CA264_09160 at 2147.939 kb on - strand, within CA264_09160 at 2147.939 kb on - strand, within CA264_09160 at 2147.939 kb on - strand, within CA264_09160 at 2147.958 kb on + strand, within CA264_09160 at 2148.282 kb on + strand, within CA264_09160 at 2148.283 kb on - strand, within CA264_09160 at 2148.337 kb on - strand, within CA264_09160 at 2148.337 kb on - strand, within CA264_09160 at 2148.449 kb on + strand, within CA264_09160 at 2148.450 kb on - strand, within CA264_09160 at 2148.453 kb on + strand, within CA264_09160 at 2148.493 kb on + strand at 2148.493 kb on + strand at 2148.494 kb on - strand at 2148.494 kb on - strand at 2148.526 kb on - strand at 2148.543 kb on - strand at 2148.543 kb on - strand at 2148.562 kb on + strand at 2148.565 kb on + strand at 2148.606 kb on - strand at 2148.624 kb on + strand at 2148.625 kb on - strand at 2148.625 kb on - strand at 2148.633 kb on + strand at 2148.647 kb on + strand at 2148.670 kb on - strand at 2148.670 kb on - strand at 2148.670 kb on - strand at 2148.674 kb on + strand at 2148.674 kb on + strand at 2148.720 kb on + strand at 2148.722 kb on + strand at 2148.722 kb on + strand at 2148.722 kb on + strand at 2148.723 kb on - strand at 2148.749 kb on - strand at 2148.764 kb on + strand at 2148.856 kb on - strand, within CA264_09165 at 2148.865 kb on + strand, within CA264_09165 at 2148.907 kb on + strand, within CA264_09165 at 2148.953 kb on - strand, within CA264_09165 at 2148.998 kb on + strand, within CA264_09165 at 2148.999 kb on - strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.007 kb on - strand, within CA264_09165 at 2149.033 kb on + strand, within CA264_09165 at 2149.257 kb on + strand, within CA264_09165 at 2149.258 kb on - strand, within CA264_09165 at 2149.356 kb on + strand at 2149.356 kb on + strand at 2149.356 kb on + strand at 2149.381 kb on + strand at 2149.412 kb on - strand at 2149.462 kb on - strand at 2149.463 kb on + strand at 2149.463 kb on + strand at 2149.464 kb on - strand at 2149.464 kb on - strand at 2149.464 kb on - strand at 2149.473 kb on + strand at 2149.478 kb on - strand at 2149.492 kb on + strand at 2149.517 kb on + strand at 2149.517 kb on + strand at 2149.517 kb on + strand at 2149.518 kb on - strand at 2149.518 kb on - strand at 2149.550 kb on - strand, within CA264_09170
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 2,146,203 - +0.2 2,146,203 - -0.0 2,146,253 - +0.1 2,146,260 - +1.4 2,146,274 - +1.6 2,146,280 - -0.4 2,146,284 + -0.5 2,146,383 - +0.3 2,146,384 + -0.8 2,146,384 + +0.1 2,146,385 - -0.7 2,146,385 - -1.6 2,146,385 - -0.3 2,146,389 - -2.3 2,146,393 + CA264_09155 0.10 -0.5 2,146,444 - CA264_09155 0.17 -1.1 2,146,575 + CA264_09155 0.33 +1.3 2,146,579 + CA264_09155 0.33 +2.5 2,146,580 - CA264_09155 0.34 +0.2 2,146,608 - CA264_09155 0.37 -0.2 2,146,788 - CA264_09155 0.60 -1.9 2,146,798 + CA264_09155 0.61 +1.0 2,146,894 + CA264_09155 0.73 -0.9 2,146,921 + CA264_09155 0.76 +1.4 2,146,938 + CA264_09155 0.78 -2.2 2,146,938 + CA264_09155 0.78 +0.8 2,146,939 - CA264_09155 0.78 -0.6 2,146,939 - CA264_09155 0.78 -1.7 2,146,943 + CA264_09155 0.79 -0.1 2,147,080 - -0.4 2,147,080 - +0.1 2,147,202 + +0.4 2,147,240 + -1.7 2,147,240 + -1.4 2,147,244 - +0.0 2,147,266 - +0.1 2,147,335 + +0.5 2,147,335 + +1.2 2,147,335 + +1.4 2,147,335 + +0.2 2,147,339 + CA264_09160 0.10 -0.6 2,147,340 - CA264_09160 0.10 -1.6 2,147,500 + CA264_09160 0.22 -1.2 2,147,500 + CA264_09160 0.22 +2.9 2,147,501 - CA264_09160 0.22 -1.6 2,147,501 - CA264_09160 0.22 +0.2 2,147,543 + CA264_09160 0.25 +0.1 2,147,543 + CA264_09160 0.25 -0.4 2,147,543 + CA264_09160 0.25 -0.2 2,147,544 - CA264_09160 0.25 -0.8 2,147,573 + CA264_09160 0.27 +1.1 2,147,669 + CA264_09160 0.34 -2.0 2,147,669 + CA264_09160 0.34 -0.4 2,147,814 - CA264_09160 0.44 +0.0 2,147,872 - CA264_09160 0.48 -0.9 2,147,938 + CA264_09160 0.53 -0.3 2,147,938 + CA264_09160 0.53 +1.6 2,147,938 + CA264_09160 0.53 +0.1 2,147,938 + CA264_09160 0.53 -0.7 2,147,939 - CA264_09160 0.53 +2.5 2,147,939 - CA264_09160 0.53 -0.1 2,147,939 - CA264_09160 0.53 -0.4 2,147,958 + CA264_09160 0.54 -2.2 2,148,282 + CA264_09160 0.77 +0.8 2,148,283 - CA264_09160 0.77 +0.3 2,148,337 - CA264_09160 0.81 +2.4 2,148,337 - CA264_09160 0.81 +0.3 2,148,449 + CA264_09160 0.89 -1.0 2,148,450 - CA264_09160 0.89 -0.1 2,148,453 + CA264_09160 0.89 -0.5 2,148,493 + -1.1 2,148,493 + +1.4 2,148,494 - +1.1 2,148,494 - -0.5 2,148,526 - -0.1 2,148,543 - -1.6 2,148,543 - -1.0 2,148,562 + +0.7 2,148,565 + -0.2 2,148,606 - +3.4 2,148,624 + -1.6 2,148,625 - -1.0 2,148,625 - -1.0 2,148,633 + -2.8 2,148,647 + -2.2 2,148,670 - -0.1 2,148,670 - -0.3 2,148,670 - -0.9 2,148,674 + +1.2 2,148,674 + +0.4 2,148,720 + +0.5 2,148,722 + +0.6 2,148,722 + -0.1 2,148,722 + -0.7 2,148,723 - +0.1 2,148,749 - -0.2 2,148,764 + -0.7 2,148,856 - CA264_09165 0.18 -1.3 2,148,865 + CA264_09165 0.20 +0.2 2,148,907 + CA264_09165 0.27 -0.4 2,148,953 - CA264_09165 0.35 -2.2 2,148,998 + CA264_09165 0.43 +0.8 2,148,999 - CA264_09165 0.43 +0.8 2,149,000 + CA264_09165 0.43 +1.1 2,149,000 + CA264_09165 0.43 -1.0 2,149,000 + CA264_09165 0.43 +0.0 2,149,001 - CA264_09165 0.43 +1.1 2,149,001 - CA264_09165 0.43 -0.1 2,149,001 - CA264_09165 0.43 -1.1 2,149,004 + CA264_09165 0.44 +0.1 2,149,004 + CA264_09165 0.44 +1.4 2,149,004 + CA264_09165 0.44 +2.5 2,149,007 - CA264_09165 0.44 +1.1 2,149,033 + CA264_09165 0.49 -0.2 2,149,257 + CA264_09165 0.88 -0.1 2,149,258 - CA264_09165 0.88 -1.1 2,149,356 + +1.1 2,149,356 + -0.1 2,149,356 + +0.5 2,149,381 + -0.3 2,149,412 - -0.4 2,149,462 - +3.8 2,149,463 + +0.3 2,149,463 + +1.0 2,149,464 - +1.4 2,149,464 - +0.6 2,149,464 - +0.7 2,149,473 + +1.7 2,149,478 - -1.9 2,149,492 + -0.0 2,149,517 + -1.4 2,149,517 + -0.4 2,149,517 + -0.1 2,149,518 - +1.2 2,149,518 - -0.2 2,149,550 - CA264_09170 0.12 -0.3
Or see this region's nucleotide sequence