Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08950 and CA264_08955 are separated by 148 nucleotides CA264_08955 and CA264_08960 are separated by 1 nucleotides
CA264_08950: CA264_08950 - short-chain dehydrogenase/reductase, at 2,090,307 to 2,091,143
_08950
CA264_08955: CA264_08955 - DNA polymerase IV, at 2,091,292 to 2,092,362
_08955
CA264_08960: CA264_08960 - haloalkane dehalogenase, at 2,092,364 to 2,093,248
_08960
Position (kb)
2091
2092
2093 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2090.309 kb on - strand at 2090.395 kb on + strand, within CA264_08950 at 2090.396 kb on - strand, within CA264_08950 at 2090.542 kb on + strand, within CA264_08950 at 2090.561 kb on + strand, within CA264_08950 at 2090.562 kb on - strand, within CA264_08950 at 2090.572 kb on - strand, within CA264_08950 at 2090.616 kb on + strand, within CA264_08950 at 2090.617 kb on - strand, within CA264_08950 at 2090.628 kb on + strand, within CA264_08950 at 2090.628 kb on + strand, within CA264_08950 at 2090.718 kb on - strand, within CA264_08950 at 2090.749 kb on - strand, within CA264_08950 at 2090.763 kb on - strand, within CA264_08950 at 2090.971 kb on - strand, within CA264_08950 at 2090.982 kb on - strand, within CA264_08950 at 2091.122 kb on + strand at 2091.217 kb on + strand at 2091.218 kb on - strand at 2091.232 kb on + strand at 2091.233 kb on - strand at 2091.254 kb on - strand at 2091.271 kb on + strand at 2091.272 kb on - strand at 2091.424 kb on + strand, within CA264_08955 at 2091.425 kb on - strand, within CA264_08955 at 2091.436 kb on - strand, within CA264_08955 at 2091.521 kb on + strand, within CA264_08955 at 2091.523 kb on + strand, within CA264_08955 at 2091.523 kb on + strand, within CA264_08955 at 2091.524 kb on - strand, within CA264_08955 at 2091.565 kb on + strand, within CA264_08955 at 2091.675 kb on + strand, within CA264_08955 at 2091.718 kb on + strand, within CA264_08955 at 2091.718 kb on + strand, within CA264_08955 at 2091.718 kb on + strand, within CA264_08955 at 2091.718 kb on + strand, within CA264_08955 at 2091.718 kb on + strand, within CA264_08955 at 2091.718 kb on + strand, within CA264_08955 at 2091.719 kb on - strand, within CA264_08955 at 2091.719 kb on - strand, within CA264_08955 at 2091.721 kb on - strand, within CA264_08955 at 2091.723 kb on + strand, within CA264_08955 at 2091.723 kb on + strand, within CA264_08955 at 2091.724 kb on - strand, within CA264_08955 at 2091.772 kb on - strand, within CA264_08955 at 2091.849 kb on - strand, within CA264_08955 at 2091.878 kb on + strand, within CA264_08955 at 2091.879 kb on - strand, within CA264_08955 at 2091.896 kb on + strand, within CA264_08955 at 2091.897 kb on - strand, within CA264_08955 at 2091.949 kb on + strand, within CA264_08955 at 2091.953 kb on - strand, within CA264_08955 at 2091.989 kb on + strand, within CA264_08955 at 2092.077 kb on - strand, within CA264_08955 at 2092.222 kb on - strand, within CA264_08955 at 2092.226 kb on - strand, within CA264_08955 at 2092.226 kb on - strand, within CA264_08955 at 2092.227 kb on + strand, within CA264_08955 at 2092.227 kb on + strand, within CA264_08955 at 2092.313 kb on - strand at 2092.360 kb on + strand at 2092.507 kb on - strand, within CA264_08960 at 2092.510 kb on + strand, within CA264_08960 at 2092.576 kb on - strand, within CA264_08960 at 2092.580 kb on + strand, within CA264_08960 at 2092.580 kb on + strand, within CA264_08960 at 2092.580 kb on + strand, within CA264_08960 at 2092.580 kb on + strand, within CA264_08960 at 2092.581 kb on - strand, within CA264_08960 at 2092.668 kb on + strand, within CA264_08960 at 2092.734 kb on + strand, within CA264_08960 at 2092.735 kb on - strand, within CA264_08960 at 2092.735 kb on - strand, within CA264_08960 at 2092.759 kb on + strand, within CA264_08960 at 2092.759 kb on + strand, within CA264_08960 at 2092.760 kb on - strand, within CA264_08960 at 2092.847 kb on + strand, within CA264_08960 at 2092.847 kb on + strand, within CA264_08960 at 2092.848 kb on - strand, within CA264_08960 at 2092.848 kb on - strand, within CA264_08960 at 2092.849 kb on + strand, within CA264_08960 at 2092.850 kb on - strand, within CA264_08960 at 2092.850 kb on - strand, within CA264_08960 at 2092.853 kb on + strand, within CA264_08960 at 2092.854 kb on - strand, within CA264_08960 at 2092.922 kb on - strand, within CA264_08960 at 2092.932 kb on + strand, within CA264_08960 at 2092.993 kb on + strand, within CA264_08960 at 2092.995 kb on + strand, within CA264_08960 at 2092.995 kb on + strand, within CA264_08960 at 2092.995 kb on + strand, within CA264_08960 at 2092.996 kb on - strand, within CA264_08960 at 2092.996 kb on - strand, within CA264_08960 at 2092.996 kb on - strand, within CA264_08960 at 2093.000 kb on - strand, within CA264_08960 at 2093.000 kb on - strand, within CA264_08960 at 2093.126 kb on - strand, within CA264_08960 at 2093.126 kb on - strand, within CA264_08960 at 2093.188 kb on + strand at 2093.188 kb on + strand at 2093.189 kb on - strand at 2093.191 kb on - strand at 2093.229 kb on - strand at 2093.252 kb on + strand at 2093.278 kb on - strand at 2093.280 kb on + strand at 2093.324 kb on + strand at 2093.324 kb on + strand at 2093.324 kb on + strand at 2093.325 kb on - strand at 2093.325 kb on - strand at 2093.330 kb on + strand at 2093.331 kb on - strand at 2093.331 kb on - strand at 2093.333 kb on + strand at 2093.334 kb on - strand at 2093.334 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 2,090,309 - +0.1 2,090,395 + CA264_08950 0.11 -0.3 2,090,396 - CA264_08950 0.11 -2.3 2,090,542 + CA264_08950 0.28 +0.5 2,090,561 + CA264_08950 0.30 -1.3 2,090,562 - CA264_08950 0.30 -0.2 2,090,572 - CA264_08950 0.32 -1.1 2,090,616 + CA264_08950 0.37 -0.5 2,090,617 - CA264_08950 0.37 +3.9 2,090,628 + CA264_08950 0.38 +0.9 2,090,628 + CA264_08950 0.38 +1.3 2,090,718 - CA264_08950 0.49 -1.6 2,090,749 - CA264_08950 0.53 -2.8 2,090,763 - CA264_08950 0.54 -0.4 2,090,971 - CA264_08950 0.79 -0.1 2,090,982 - CA264_08950 0.81 +0.4 2,091,122 + -0.6 2,091,217 + +2.2 2,091,218 - +1.6 2,091,232 + +0.6 2,091,233 - -0.0 2,091,254 - -0.0 2,091,271 + -0.7 2,091,272 - -0.0 2,091,424 + CA264_08955 0.12 -2.2 2,091,425 - CA264_08955 0.12 -0.1 2,091,436 - CA264_08955 0.13 -0.0 2,091,521 + CA264_08955 0.21 -0.1 2,091,523 + CA264_08955 0.22 -1.7 2,091,523 + CA264_08955 0.22 -0.8 2,091,524 - CA264_08955 0.22 -0.4 2,091,565 + CA264_08955 0.25 -1.1 2,091,675 + CA264_08955 0.36 +0.5 2,091,718 + CA264_08955 0.40 -1.5 2,091,718 + CA264_08955 0.40 -0.5 2,091,718 + CA264_08955 0.40 -0.8 2,091,718 + CA264_08955 0.40 -0.1 2,091,718 + CA264_08955 0.40 -2.0 2,091,718 + CA264_08955 0.40 +0.6 2,091,719 - CA264_08955 0.40 -1.3 2,091,719 - CA264_08955 0.40 -0.1 2,091,721 - CA264_08955 0.40 -0.4 2,091,723 + CA264_08955 0.40 +1.3 2,091,723 + CA264_08955 0.40 +1.3 2,091,724 - CA264_08955 0.40 -0.2 2,091,772 - CA264_08955 0.45 +0.6 2,091,849 - CA264_08955 0.52 +0.1 2,091,878 + CA264_08955 0.55 +0.1 2,091,879 - CA264_08955 0.55 -1.4 2,091,896 + CA264_08955 0.56 -0.6 2,091,897 - CA264_08955 0.56 -0.5 2,091,949 + CA264_08955 0.61 +1.3 2,091,953 - CA264_08955 0.62 +0.8 2,091,989 + CA264_08955 0.65 -1.3 2,092,077 - CA264_08955 0.73 +0.7 2,092,222 - CA264_08955 0.87 +0.8 2,092,226 - CA264_08955 0.87 +0.0 2,092,226 - CA264_08955 0.87 +1.2 2,092,227 + CA264_08955 0.87 +0.5 2,092,227 + CA264_08955 0.87 -0.8 2,092,313 - +0.4 2,092,360 + -1.7 2,092,507 - CA264_08960 0.16 -0.4 2,092,510 + CA264_08960 0.16 +0.4 2,092,576 - CA264_08960 0.24 +1.4 2,092,580 + CA264_08960 0.24 +2.8 2,092,580 + CA264_08960 0.24 -1.2 2,092,580 + CA264_08960 0.24 -0.2 2,092,580 + CA264_08960 0.24 -0.9 2,092,581 - CA264_08960 0.25 +0.9 2,092,668 + CA264_08960 0.34 +0.5 2,092,734 + CA264_08960 0.42 +0.2 2,092,735 - CA264_08960 0.42 -0.1 2,092,735 - CA264_08960 0.42 -1.3 2,092,759 + CA264_08960 0.45 -0.2 2,092,759 + CA264_08960 0.45 +0.6 2,092,760 - CA264_08960 0.45 +2.4 2,092,847 + CA264_08960 0.55 -0.0 2,092,847 + CA264_08960 0.55 -2.1 2,092,848 - CA264_08960 0.55 -0.7 2,092,848 - CA264_08960 0.55 -0.9 2,092,849 + CA264_08960 0.55 +1.5 2,092,850 - CA264_08960 0.55 +0.0 2,092,850 - CA264_08960 0.55 -0.3 2,092,853 + CA264_08960 0.55 +1.4 2,092,854 - CA264_08960 0.55 -0.8 2,092,922 - CA264_08960 0.63 +1.1 2,092,932 + CA264_08960 0.64 -1.6 2,092,993 + CA264_08960 0.71 +0.0 2,092,995 + CA264_08960 0.71 -1.1 2,092,995 + CA264_08960 0.71 -0.9 2,092,995 + CA264_08960 0.71 +1.1 2,092,996 - CA264_08960 0.71 +0.5 2,092,996 - CA264_08960 0.71 -0.5 2,092,996 - CA264_08960 0.71 -1.1 2,093,000 - CA264_08960 0.72 -0.5 2,093,000 - CA264_08960 0.72 -0.8 2,093,126 - CA264_08960 0.86 -0.6 2,093,126 - CA264_08960 0.86 +0.0 2,093,188 + -0.5 2,093,188 + +3.8 2,093,189 - -0.5 2,093,191 - -1.4 2,093,229 - -1.1 2,093,252 + -0.2 2,093,278 - +0.9 2,093,280 + +0.1 2,093,324 + +0.9 2,093,324 + -0.1 2,093,324 + -1.0 2,093,325 - -1.0 2,093,325 - -0.7 2,093,330 + -1.0 2,093,331 - +1.0 2,093,331 - +1.0 2,093,333 + -0.5 2,093,334 - +1.4 2,093,334 - -2.8
Or see this region's nucleotide sequence