Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08060 and CA264_08065 are separated by 185 nucleotides CA264_08065 and CA264_08070 are separated by 107 nucleotides
CA264_08060: CA264_08060 - two-component sensor histidine kinase, at 1,860,920 to 1,862,245
_08060
CA264_08065: CA264_08065 - DNA polymerase III subunit beta, at 1,862,431 to 1,863,555
_08065
CA264_08070: CA264_08070 - gliding motility-associated ABC transporter substrate-binding protein GldG, at 1,863,663 to 1,865,354
_08070
Position (kb)
1862
1863
1864 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1861.578 kb on - strand, within CA264_08060 at 1861.669 kb on - strand, within CA264_08060 at 1861.700 kb on + strand, within CA264_08060 at 1861.780 kb on + strand, within CA264_08060 at 1861.780 kb on + strand, within CA264_08060 at 1861.841 kb on + strand, within CA264_08060 at 1862.040 kb on + strand, within CA264_08060 at 1862.041 kb on - strand, within CA264_08060 at 1862.046 kb on + strand, within CA264_08060 at 1862.046 kb on + strand, within CA264_08060 at 1862.050 kb on - strand, within CA264_08060 at 1862.077 kb on + strand, within CA264_08060 at 1862.229 kb on + strand at 1862.272 kb on - strand at 1862.274 kb on - strand at 1862.274 kb on - strand at 1862.336 kb on - strand at 1862.438 kb on + strand at 1862.438 kb on + strand at 1862.438 kb on + strand at 1862.439 kb on - strand at 1862.439 kb on - strand at 1863.563 kb on - strand at 1863.567 kb on - strand at 1863.574 kb on + strand at 1863.648 kb on + strand at 1863.649 kb on - strand at 1863.650 kb on + strand at 1863.658 kb on + strand at 1863.659 kb on - strand at 1863.659 kb on - strand at 1863.697 kb on + strand at 1863.854 kb on - strand, within CA264_08070 at 1864.366 kb on + strand, within CA264_08070
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 1,861,578 - CA264_08060 0.50 +1.7 1,861,669 - CA264_08060 0.56 -1.4 1,861,700 + CA264_08060 0.59 -1.0 1,861,780 + CA264_08060 0.65 -0.6 1,861,780 + CA264_08060 0.65 -0.8 1,861,841 + CA264_08060 0.69 +0.4 1,862,040 + CA264_08060 0.84 -1.3 1,862,041 - CA264_08060 0.85 -0.0 1,862,046 + CA264_08060 0.85 -2.2 1,862,046 + CA264_08060 0.85 +2.0 1,862,050 - CA264_08060 0.85 -0.6 1,862,077 + CA264_08060 0.87 -0.4 1,862,229 + -0.5 1,862,272 - +0.2 1,862,274 - -0.4 1,862,274 - -1.8 1,862,336 - -3.4 1,862,438 + -0.6 1,862,438 + -1.1 1,862,438 + -2.1 1,862,439 - -0.0 1,862,439 - -0.7 1,863,563 - +1.2 1,863,567 - -0.2 1,863,574 + +0.8 1,863,648 + -1.4 1,863,649 - -0.5 1,863,650 + +1.0 1,863,658 + -2.6 1,863,659 - -1.5 1,863,659 - +0.1 1,863,697 + -1.1 1,863,854 - CA264_08070 0.11 +3.0 1,864,366 + CA264_08070 0.42 -0.7
Or see this region's nucleotide sequence