Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07005

Experiment: m.b. Cisplatin 0.035 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06995 and CA264_07000 are separated by 6 nucleotidesCA264_07000 and CA264_07005 are separated by 14 nucleotidesCA264_07005 and CA264_07010 are separated by 19 nucleotides CA264_06995: CA264_06995 - fatty acid hydroxylase, at 1,613,979 to 1,614,599 _06995 CA264_07000: CA264_07000 - DUF4833 domain-containing protein, at 1,614,606 to 1,615,172 _07000 CA264_07005: CA264_07005 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase, at 1,615,187 to 1,615,906 _07005 CA264_07010: CA264_07010 - hypothetical protein, at 1,615,926 to 1,618,535 _07010 Position (kb) 1615 1616Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 1614.481 kb on - strand, within CA264_06995at 1614.494 kb on - strand, within CA264_06995at 1614.494 kb on - strand, within CA264_06995at 1614.494 kb on - strand, within CA264_06995at 1614.512 kb on + strand, within CA264_06995at 1614.513 kb on - strand, within CA264_06995at 1614.514 kb on + strand, within CA264_06995at 1614.514 kb on + strand, within CA264_06995at 1614.514 kb on + strand, within CA264_06995at 1614.519 kb on + strand, within CA264_06995at 1614.519 kb on + strand, within CA264_06995at 1614.520 kb on - strand, within CA264_06995at 1614.547 kb on + strandat 1614.547 kb on + strandat 1614.548 kb on - strandat 1614.551 kb on + strandat 1614.551 kb on + strandat 1614.551 kb on + strandat 1614.552 kb on - strandat 1614.614 kb on + strandat 1614.666 kb on + strand, within CA264_07000at 1614.667 kb on - strand, within CA264_07000at 1614.667 kb on - strand, within CA264_07000at 1614.670 kb on + strand, within CA264_07000at 1614.670 kb on + strand, within CA264_07000at 1614.671 kb on - strand, within CA264_07000at 1614.758 kb on - strand, within CA264_07000at 1614.766 kb on + strand, within CA264_07000at 1614.766 kb on + strand, within CA264_07000at 1614.767 kb on - strand, within CA264_07000at 1614.767 kb on - strand, within CA264_07000at 1614.833 kb on - strand, within CA264_07000at 1614.890 kb on - strand, within CA264_07000at 1614.922 kb on + strand, within CA264_07000at 1614.991 kb on + strand, within CA264_07000at 1614.991 kb on + strand, within CA264_07000at 1614.992 kb on - strand, within CA264_07000at 1615.068 kb on - strand, within CA264_07000at 1615.068 kb on - strand, within CA264_07000at 1615.132 kb on + strandat 1615.132 kb on + strandat 1615.152 kb on + strandat 1615.182 kb on + strandat 1615.189 kb on - strandat 1615.338 kb on + strand, within CA264_07005at 1615.340 kb on + strand, within CA264_07005at 1615.340 kb on + strand, within CA264_07005at 1615.341 kb on - strand, within CA264_07005at 1615.346 kb on - strand, within CA264_07005at 1615.348 kb on - strand, within CA264_07005at 1615.348 kb on - strand, within CA264_07005at 1615.368 kb on + strand, within CA264_07005at 1615.442 kb on - strand, within CA264_07005at 1615.480 kb on - strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.484 kb on + strand, within CA264_07005at 1615.485 kb on - strand, within CA264_07005at 1615.571 kb on - strand, within CA264_07005at 1615.611 kb on + strand, within CA264_07005at 1615.611 kb on + strand, within CA264_07005at 1615.612 kb on - strand, within CA264_07005at 1615.612 kb on - strand, within CA264_07005at 1615.716 kb on + strand, within CA264_07005at 1615.756 kb on + strand, within CA264_07005at 1615.762 kb on + strand, within CA264_07005at 1615.798 kb on + strand, within CA264_07005at 1615.799 kb on - strand, within CA264_07005at 1615.817 kb on - strand, within CA264_07005at 1615.863 kb on + strandat 1615.863 kb on + strandat 1615.863 kb on + strandat 1615.864 kb on - strandat 1615.864 kb on - strandat 1615.864 kb on - strandat 1615.864 kb on - strandat 1615.864 kb on - strandat 1615.864 kb on - strandat 1615.864 kb on - strandat 1615.864 kb on - strandat 1615.864 kb on - strandat 1615.865 kb on + strandat 1615.865 kb on + strandat 1615.865 kb on + strandat 1615.866 kb on - strandat 1615.867 kb on + strandat 1615.868 kb on - strandat 1615.868 kb on - strandat 1615.868 kb on - strandat 1615.907 kb on - strandat 1615.912 kb on - strandat 1615.912 kb on - strandat 1615.919 kb on - strandat 1615.953 kb on + strandat 1615.953 kb on + strandat 1615.954 kb on - strandat 1615.959 kb on + strandat 1615.959 kb on + strandat 1615.974 kb on - strandat 1616.010 kb on + strandat 1616.011 kb on - strandat 1616.057 kb on + strandat 1616.057 kb on + strandat 1616.057 kb on + strandat 1616.058 kb on - strandat 1616.059 kb on + strandat 1616.059 kb on + strandat 1616.060 kb on - strandat 1616.081 kb on - strandat 1616.081 kb on - strandat 1616.168 kb on - strandat 1616.221 kb on - strand, within CA264_07010at 1616.234 kb on + strand, within CA264_07010at 1616.249 kb on + strand, within CA264_07010at 1616.311 kb on + strand, within CA264_07010at 1616.311 kb on + strand, within CA264_07010at 1616.312 kb on - strand, within CA264_07010at 1616.332 kb on - strand, within CA264_07010at 1616.333 kb on - strand, within CA264_07010at 1616.333 kb on - strand, within CA264_07010at 1616.387 kb on + strand, within CA264_07010at 1616.387 kb on + strand, within CA264_07010at 1616.388 kb on - strand, within CA264_07010at 1616.389 kb on + strand, within CA264_07010at 1616.404 kb on - strand, within CA264_07010at 1616.435 kb on - strand, within CA264_07010at 1616.447 kb on - strand, within CA264_07010at 1616.476 kb on + strand, within CA264_07010at 1616.684 kb on - strand, within CA264_07010at 1616.684 kb on - strand, within CA264_07010at 1616.684 kb on - strand, within CA264_07010at 1616.735 kb on - strand, within CA264_07010at 1616.765 kb on - strand, within CA264_07010at 1616.768 kb on + strand, within CA264_07010at 1616.769 kb on - strand, within CA264_07010at 1616.776 kb on + strand, within CA264_07010at 1616.776 kb on + strand, within CA264_07010at 1616.788 kb on + strand, within CA264_07010at 1616.816 kb on + strand, within CA264_07010at 1616.901 kb on - strand, within CA264_07010

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml
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1,614,481 - CA264_06995 0.81 +0.2
1,614,494 - CA264_06995 0.83 +1.6
1,614,494 - CA264_06995 0.83 +1.4
1,614,494 - CA264_06995 0.83 +0.2
1,614,512 + CA264_06995 0.86 +0.2
1,614,513 - CA264_06995 0.86 +0.7
1,614,514 + CA264_06995 0.86 +3.4
1,614,514 + CA264_06995 0.86 +0.6
1,614,514 + CA264_06995 0.86 +0.2
1,614,519 + CA264_06995 0.87 +0.8
1,614,519 + CA264_06995 0.87 +0.2
1,614,520 - CA264_06995 0.87 -1.8
1,614,547 + -1.8
1,614,547 + +0.3
1,614,548 - -0.5
1,614,551 + -0.7
1,614,551 + -0.5
1,614,551 + -2.6
1,614,552 - -0.8
1,614,614 + -0.7
1,614,666 + CA264_07000 0.11 +0.6
1,614,667 - CA264_07000 0.11 +1.6
1,614,667 - CA264_07000 0.11 +3.7
1,614,670 + CA264_07000 0.11 +2.4
1,614,670 + CA264_07000 0.11 -0.6
1,614,671 - CA264_07000 0.11 -0.6
1,614,758 - CA264_07000 0.27 -0.2
1,614,766 + CA264_07000 0.28 -0.5
1,614,766 + CA264_07000 0.28 -0.8
1,614,767 - CA264_07000 0.28 -1.2
1,614,767 - CA264_07000 0.28 -0.5
1,614,833 - CA264_07000 0.40 +6.2
1,614,890 - CA264_07000 0.50 -1.2
1,614,922 + CA264_07000 0.56 -0.6
1,614,991 + CA264_07000 0.68 +0.8
1,614,991 + CA264_07000 0.68 +0.9
1,614,992 - CA264_07000 0.68 -1.9
1,615,068 - CA264_07000 0.81 +0.3
1,615,068 - CA264_07000 0.81 -0.5
1,615,132 + +0.0
1,615,132 + +1.4
1,615,152 + -1.2
1,615,182 + +0.5
1,615,189 - +0.1
1,615,338 + CA264_07005 0.21 +0.1
1,615,340 + CA264_07005 0.21 +2.3
1,615,340 + CA264_07005 0.21 -0.5
1,615,341 - CA264_07005 0.21 +1.3
1,615,346 - CA264_07005 0.22 -1.0
1,615,348 - CA264_07005 0.22 +6.5
1,615,348 - CA264_07005 0.22 +1.7
1,615,368 + CA264_07005 0.25 +2.0
1,615,442 - CA264_07005 0.35 +2.3
1,615,480 - CA264_07005 0.41 -0.8
1,615,484 + CA264_07005 0.41 -1.2
1,615,484 + CA264_07005 0.41 -0.4
1,615,484 + CA264_07005 0.41 +0.0
1,615,484 + CA264_07005 0.41 -2.5
1,615,484 + CA264_07005 0.41 +1.0
1,615,485 - CA264_07005 0.41 +0.8
1,615,571 - CA264_07005 0.53 -0.9
1,615,611 + CA264_07005 0.59 +1.7
1,615,611 + CA264_07005 0.59 +3.6
1,615,612 - CA264_07005 0.59 +2.1
1,615,612 - CA264_07005 0.59 -0.5
1,615,716 + CA264_07005 0.73 -1.5
1,615,756 + CA264_07005 0.79 -0.3
1,615,762 + CA264_07005 0.80 -0.8
1,615,798 + CA264_07005 0.85 -0.1
1,615,799 - CA264_07005 0.85 +1.2
1,615,817 - CA264_07005 0.88 -1.0
1,615,863 + -0.2
1,615,863 + +0.3
1,615,863 + +0.8
1,615,864 - -1.3
1,615,864 - -0.5
1,615,864 - -0.3
1,615,864 - -1.0
1,615,864 - +0.4
1,615,864 - -0.4
1,615,864 - +0.4
1,615,864 - -1.7
1,615,864 - -0.2
1,615,865 + +0.9
1,615,865 + -1.0
1,615,865 + -1.3
1,615,866 - +0.5
1,615,867 + +1.4
1,615,868 - -0.7
1,615,868 - -0.4
1,615,868 - -0.2
1,615,907 - -0.9
1,615,912 - +1.7
1,615,912 - -1.3
1,615,919 - +0.2
1,615,953 + +1.8
1,615,953 + -1.1
1,615,954 - +0.1
1,615,959 + -0.4
1,615,959 + +0.6
1,615,974 - +0.1
1,616,010 + -1.3
1,616,011 - -0.2
1,616,057 + +1.8
1,616,057 + +1.5
1,616,057 + -1.1
1,616,058 - -1.6
1,616,059 + +0.8
1,616,059 + +0.4
1,616,060 - +0.3
1,616,081 - -0.4
1,616,081 - -0.5
1,616,168 - +1.9
1,616,221 - CA264_07010 0.11 +0.1
1,616,234 + CA264_07010 0.12 -0.5
1,616,249 + CA264_07010 0.12 -0.5
1,616,311 + CA264_07010 0.15 -0.9
1,616,311 + CA264_07010 0.15 +0.7
1,616,312 - CA264_07010 0.15 -0.3
1,616,332 - CA264_07010 0.16 +1.1
1,616,333 - CA264_07010 0.16 -0.8
1,616,333 - CA264_07010 0.16 -2.4
1,616,387 + CA264_07010 0.18 -0.7
1,616,387 + CA264_07010 0.18 +3.4
1,616,388 - CA264_07010 0.18 +0.7
1,616,389 + CA264_07010 0.18 -1.7
1,616,404 - CA264_07010 0.18 -0.1
1,616,435 - CA264_07010 0.20 +2.4
1,616,447 - CA264_07010 0.20 +0.2
1,616,476 + CA264_07010 0.21 -0.8
1,616,684 - CA264_07010 0.29 +1.4
1,616,684 - CA264_07010 0.29 +0.7
1,616,684 - CA264_07010 0.29 +1.9
1,616,735 - CA264_07010 0.31 +0.9
1,616,765 - CA264_07010 0.32 +0.2
1,616,768 + CA264_07010 0.32 -0.3
1,616,769 - CA264_07010 0.32 -1.1
1,616,776 + CA264_07010 0.33 +1.5
1,616,776 + CA264_07010 0.33 -1.3
1,616,788 + CA264_07010 0.33 -0.1
1,616,816 + CA264_07010 0.34 -0.7
1,616,901 - CA264_07010 0.37 +0.1

Or see this region's nucleotide sequence