Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06385 and CA264_06390 are separated by 25 nucleotides CA264_06390 and CA264_06395 are separated by 154 nucleotides CA264_06395 and CA264_06400 overlap by 8 nucleotides CA264_06400 and CA264_06405 overlap by 17 nucleotides
CA264_06385: CA264_06385 - tRNA-binding protein, at 1,484,249 to 1,484,584
_06385
CA264_06390: CA264_06390 - hypothetical protein, at 1,484,610 to 1,484,906
_06390
CA264_06395: CA264_06395 - DUF58 domain-containing protein, at 1,485,061 to 1,485,942
_06395
CA264_06400: CA264_06400 - hypothetical protein, at 1,485,935 to 1,486,846
_06400
CA264_06405: CA264_06405 - VWA domain-containing protein, at 1,486,830 to 1,487,879
_06405
Position (kb)
1485
1486 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1484.082 kb on - strand at 1484.098 kb on + strand at 1484.099 kb on - strand at 1484.106 kb on + strand at 1484.106 kb on + strand at 1484.107 kb on - strand at 1484.107 kb on - strand at 1484.109 kb on - strand at 1484.184 kb on + strand at 1484.216 kb on + strand at 1484.216 kb on + strand at 1484.216 kb on + strand at 1484.217 kb on - strand at 1484.217 kb on - strand at 1484.219 kb on - strand at 1484.219 kb on - strand at 1484.219 kb on - strand at 1484.222 kb on + strand at 1484.222 kb on + strand at 1484.222 kb on + strand at 1484.223 kb on - strand at 1484.304 kb on + strand, within CA264_06385 at 1484.304 kb on + strand, within CA264_06385 at 1484.305 kb on - strand, within CA264_06385 at 1484.307 kb on + strand, within CA264_06385 at 1484.307 kb on + strand, within CA264_06385 at 1484.347 kb on + strand, within CA264_06385 at 1484.347 kb on + strand, within CA264_06385 at 1484.348 kb on - strand, within CA264_06385 at 1484.348 kb on - strand, within CA264_06385 at 1484.352 kb on + strand, within CA264_06385 at 1484.352 kb on + strand, within CA264_06385 at 1484.353 kb on - strand, within CA264_06385 at 1484.358 kb on + strand, within CA264_06385 at 1484.359 kb on - strand, within CA264_06385 at 1484.412 kb on - strand, within CA264_06385 at 1484.451 kb on + strand, within CA264_06385 at 1484.497 kb on - strand, within CA264_06385 at 1484.530 kb on + strand, within CA264_06385 at 1484.531 kb on - strand, within CA264_06385 at 1484.531 kb on - strand, within CA264_06385 at 1484.535 kb on + strand, within CA264_06385 at 1484.535 kb on + strand, within CA264_06385 at 1484.580 kb on + strand at 1484.581 kb on - strand at 1484.581 kb on - strand at 1484.581 kb on - strand at 1484.582 kb on + strand at 1484.612 kb on - strand at 1484.612 kb on - strand at 1484.612 kb on - strand at 1484.616 kb on + strand at 1484.617 kb on - strand at 1484.617 kb on - strand at 1485.022 kb on - strand at 1485.028 kb on + strand at 1485.074 kb on + strand at 1485.098 kb on + strand at 1485.099 kb on - strand at 1485.105 kb on - strand at 1485.197 kb on - strand, within CA264_06395 at 1485.216 kb on + strand, within CA264_06395 at 1485.426 kb on + strand, within CA264_06395 at 1485.438 kb on + strand, within CA264_06395 at 1485.448 kb on + strand, within CA264_06395 at 1485.448 kb on + strand, within CA264_06395 at 1485.449 kb on - strand, within CA264_06395 at 1485.482 kb on - strand, within CA264_06395 at 1485.491 kb on + strand, within CA264_06395 at 1485.491 kb on + strand, within CA264_06395 at 1485.492 kb on - strand, within CA264_06395 at 1485.492 kb on - strand, within CA264_06395 at 1485.494 kb on - strand, within CA264_06395 at 1485.548 kb on + strand, within CA264_06395 at 1485.549 kb on - strand, within CA264_06395 at 1485.606 kb on + strand, within CA264_06395 at 1485.787 kb on + strand, within CA264_06395 at 1485.829 kb on - strand, within CA264_06395 at 1485.829 kb on - strand, within CA264_06395 at 1485.841 kb on + strand, within CA264_06395 at 1485.841 kb on + strand, within CA264_06395 at 1485.842 kb on - strand, within CA264_06395 at 1485.853 kb on + strand, within CA264_06395 at 1485.880 kb on + strand at 1485.880 kb on + strand at 1485.919 kb on - strand at 1485.941 kb on - strand at 1486.000 kb on - strand at 1486.000 kb on - strand at 1486.035 kb on + strand, within CA264_06400 at 1486.036 kb on - strand, within CA264_06400 at 1486.059 kb on - strand, within CA264_06400 at 1486.060 kb on + strand, within CA264_06400 at 1486.060 kb on + strand, within CA264_06400 at 1486.061 kb on - strand, within CA264_06400 at 1486.061 kb on - strand, within CA264_06400 at 1486.098 kb on + strand, within CA264_06400 at 1486.199 kb on + strand, within CA264_06400 at 1486.254 kb on - strand, within CA264_06400 at 1486.351 kb on - strand, within CA264_06400 at 1486.364 kb on - strand, within CA264_06400 at 1486.391 kb on - strand, within CA264_06400 at 1486.455 kb on + strand, within CA264_06400 at 1486.481 kb on + strand, within CA264_06400 at 1486.482 kb on - strand, within CA264_06400 at 1486.514 kb on + strand, within CA264_06400 at 1486.577 kb on - strand, within CA264_06400 at 1486.578 kb on + strand, within CA264_06400 at 1486.579 kb on - strand, within CA264_06400 at 1486.670 kb on + strand, within CA264_06400 at 1486.670 kb on + strand, within CA264_06400 at 1486.671 kb on - strand, within CA264_06400 at 1486.706 kb on - strand, within CA264_06400 at 1486.706 kb on - strand, within CA264_06400 at 1486.706 kb on - strand, within CA264_06400 at 1486.724 kb on + strand, within CA264_06400 at 1486.724 kb on + strand, within CA264_06400 at 1486.725 kb on - strand, within CA264_06400 at 1486.725 kb on - strand, within CA264_06400 at 1486.765 kb on - strand at 1486.771 kb on - strand at 1486.821 kb on + strand at 1486.822 kb on - strand at 1486.822 kb on - strand at 1486.834 kb on + strand at 1486.840 kb on + strand at 1486.840 kb on + strand at 1486.840 kb on + strand at 1486.841 kb on - strand at 1486.841 kb on - strand at 1486.880 kb on + strand at 1486.884 kb on + strand at 1486.885 kb on - strand at 1486.914 kb on + strand at 1486.929 kb on + strand at 1486.930 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 1,484,082 - +0.8 1,484,098 + -1.1 1,484,099 - +1.2 1,484,106 + -0.8 1,484,106 + -1.3 1,484,107 - +0.3 1,484,107 - -0.5 1,484,109 - -1.2 1,484,184 + -1.2 1,484,216 + -2.3 1,484,216 + +1.9 1,484,216 + -1.7 1,484,217 - +0.0 1,484,217 - -1.6 1,484,219 - +1.0 1,484,219 - +1.3 1,484,219 - -1.7 1,484,222 + -0.9 1,484,222 + +2.1 1,484,222 + +1.2 1,484,223 - -1.2 1,484,304 + CA264_06385 0.16 -0.3 1,484,304 + CA264_06385 0.16 +0.0 1,484,305 - CA264_06385 0.17 -0.3 1,484,307 + CA264_06385 0.17 -2.3 1,484,307 + CA264_06385 0.17 -0.5 1,484,347 + CA264_06385 0.29 -0.9 1,484,347 + CA264_06385 0.29 +1.2 1,484,348 - CA264_06385 0.29 +0.2 1,484,348 - CA264_06385 0.29 +0.8 1,484,352 + CA264_06385 0.31 +0.5 1,484,352 + CA264_06385 0.31 -0.0 1,484,353 - CA264_06385 0.31 -0.8 1,484,358 + CA264_06385 0.32 +0.5 1,484,359 - CA264_06385 0.33 +0.5 1,484,412 - CA264_06385 0.49 -0.1 1,484,451 + CA264_06385 0.60 -0.4 1,484,497 - CA264_06385 0.74 -0.1 1,484,530 + CA264_06385 0.84 -0.1 1,484,531 - CA264_06385 0.84 -1.0 1,484,531 - CA264_06385 0.84 +0.0 1,484,535 + CA264_06385 0.85 -1.3 1,484,535 + CA264_06385 0.85 -0.5 1,484,580 + -0.3 1,484,581 - -1.1 1,484,581 - -0.4 1,484,581 - -0.2 1,484,582 + -0.1 1,484,612 - +1.6 1,484,612 - +0.9 1,484,612 - -1.1 1,484,616 + -0.1 1,484,617 - -1.3 1,484,617 - -1.2 1,485,022 - +0.8 1,485,028 + -0.3 1,485,074 + +1.0 1,485,098 + -0.5 1,485,099 - -1.4 1,485,105 - +0.1 1,485,197 - CA264_06395 0.15 -2.1 1,485,216 + CA264_06395 0.18 +0.1 1,485,426 + CA264_06395 0.41 -1.1 1,485,438 + CA264_06395 0.43 -0.3 1,485,448 + CA264_06395 0.44 +1.8 1,485,448 + CA264_06395 0.44 -1.2 1,485,449 - CA264_06395 0.44 -0.5 1,485,482 - CA264_06395 0.48 +0.5 1,485,491 + CA264_06395 0.49 +0.8 1,485,491 + CA264_06395 0.49 +0.3 1,485,492 - CA264_06395 0.49 +1.0 1,485,492 - CA264_06395 0.49 +1.6 1,485,494 - CA264_06395 0.49 -0.9 1,485,548 + CA264_06395 0.55 +0.6 1,485,549 - CA264_06395 0.55 +2.2 1,485,606 + CA264_06395 0.62 +1.2 1,485,787 + CA264_06395 0.82 +0.5 1,485,829 - CA264_06395 0.87 -0.5 1,485,829 - CA264_06395 0.87 -0.1 1,485,841 + CA264_06395 0.88 -0.7 1,485,841 + CA264_06395 0.88 -0.3 1,485,842 - CA264_06395 0.89 -0.7 1,485,853 + CA264_06395 0.90 +0.4 1,485,880 + +0.6 1,485,880 + +1.3 1,485,919 - +1.8 1,485,941 - -0.2 1,486,000 - -0.6 1,486,000 - -0.8 1,486,035 + CA264_06400 0.11 -0.2 1,486,036 - CA264_06400 0.11 +0.8 1,486,059 - CA264_06400 0.14 +0.1 1,486,060 + CA264_06400 0.14 -0.8 1,486,060 + CA264_06400 0.14 -0.1 1,486,061 - CA264_06400 0.14 +3.3 1,486,061 - CA264_06400 0.14 +0.7 1,486,098 + CA264_06400 0.18 +1.3 1,486,199 + CA264_06400 0.29 -0.4 1,486,254 - CA264_06400 0.35 +1.6 1,486,351 - CA264_06400 0.46 +0.5 1,486,364 - CA264_06400 0.47 -0.5 1,486,391 - CA264_06400 0.50 +1.0 1,486,455 + CA264_06400 0.57 +0.7 1,486,481 + CA264_06400 0.60 -0.0 1,486,482 - CA264_06400 0.60 +0.1 1,486,514 + CA264_06400 0.63 -0.4 1,486,577 - CA264_06400 0.70 +0.7 1,486,578 + CA264_06400 0.71 +0.3 1,486,579 - CA264_06400 0.71 +1.3 1,486,670 + CA264_06400 0.81 -0.7 1,486,670 + CA264_06400 0.81 -1.0 1,486,671 - CA264_06400 0.81 +0.3 1,486,706 - CA264_06400 0.85 -0.3 1,486,706 - CA264_06400 0.85 +0.4 1,486,706 - CA264_06400 0.85 +1.1 1,486,724 + CA264_06400 0.87 -0.9 1,486,724 + CA264_06400 0.87 +1.3 1,486,725 - CA264_06400 0.87 -0.5 1,486,725 - CA264_06400 0.87 +5.2 1,486,765 - +0.7 1,486,771 - -1.4 1,486,821 + -0.1 1,486,822 - +1.3 1,486,822 - +1.6 1,486,834 + -0.4 1,486,840 + -0.2 1,486,840 + -2.2 1,486,840 + -1.3 1,486,841 - -0.5 1,486,841 - -0.1 1,486,880 + +1.6 1,486,884 + -1.6 1,486,885 - +2.4 1,486,914 + +0.8 1,486,929 + -0.8 1,486,930 + +0.2
Or see this region's nucleotide sequence