Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04750 and CA264_04755 overlap by 4 nucleotides CA264_04755 and CA264_04760 are separated by 6 nucleotides CA264_04760 and CA264_04765 are separated by 12 nucleotides CA264_04765 and CA264_04770 are separated by 7 nucleotides
CA264_04750: CA264_04750 - 4-hydroxy-tetrahydrodipicolinate reductase, at 1,099,304 to 1,100,020
_04750
CA264_04755: CA264_04755 - hypothetical protein, at 1,100,017 to 1,100,679
_04755
CA264_04760: CA264_04760 - chromosome partitioning protein ParB, at 1,100,686 to 1,101,600
_04760
CA264_04765: CA264_04765 - chromosome partitioning protein ParA, at 1,101,613 to 1,102,395
_04765
CA264_04770: CA264_04770 - metal-dependent hydrolase, at 1,102,403 to 1,103,083
_04770
Position (kb)
1100
1101
1102 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1100.691 kb on - strand at 1100.691 kb on - strand at 1100.805 kb on + strand, within CA264_04760 at 1100.805 kb on + strand, within CA264_04760 at 1100.805 kb on + strand, within CA264_04760 at 1100.903 kb on - strand, within CA264_04760 at 1101.074 kb on + strand, within CA264_04760 at 1101.263 kb on - strand, within CA264_04760 at 1101.378 kb on + strand, within CA264_04760 at 1101.379 kb on - strand, within CA264_04760 at 1101.381 kb on + strand, within CA264_04760 at 1101.381 kb on + strand, within CA264_04760 at 1101.466 kb on - strand, within CA264_04760 at 1101.466 kb on - strand, within CA264_04760 at 1101.477 kb on + strand, within CA264_04760 at 1101.477 kb on + strand, within CA264_04760 at 1101.478 kb on - strand, within CA264_04760 at 1101.478 kb on - strand, within CA264_04760 at 1101.481 kb on + strand, within CA264_04760 at 1101.481 kb on + strand, within CA264_04760 at 1101.481 kb on + strand, within CA264_04760 at 1101.482 kb on - strand, within CA264_04760 at 1101.522 kb on + strand at 1101.602 kb on + strand at 1101.602 kb on + strand at 1101.609 kb on - strand at 1101.615 kb on - strand at 1101.628 kb on + strand at 1101.646 kb on + strand at 1101.737 kb on - strand, within CA264_04765 at 1101.737 kb on - strand, within CA264_04765 at 1101.769 kb on + strand, within CA264_04765 at 1101.836 kb on + strand, within CA264_04765 at 1101.836 kb on + strand, within CA264_04765 at 1101.837 kb on - strand, within CA264_04765 at 1101.837 kb on - strand, within CA264_04765 at 1101.837 kb on - strand, within CA264_04765 at 1101.859 kb on + strand, within CA264_04765 at 1101.860 kb on - strand, within CA264_04765 at 1101.873 kb on + strand, within CA264_04765 at 1101.874 kb on - strand, within CA264_04765 at 1101.919 kb on + strand, within CA264_04765 at 1101.956 kb on - strand, within CA264_04765 at 1102.215 kb on - strand, within CA264_04765 at 1102.333 kb on - strand at 1102.406 kb on + strand at 1102.407 kb on - strand at 1102.407 kb on - strand at 1102.425 kb on - strand at 1102.436 kb on + strand at 1102.437 kb on - strand at 1102.438 kb on + strand at 1102.439 kb on - strand at 1102.535 kb on + strand, within CA264_04770 at 1102.536 kb on - strand, within CA264_04770 at 1102.536 kb on - strand, within CA264_04770 at 1102.579 kb on + strand, within CA264_04770 at 1102.580 kb on - strand, within CA264_04770
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 1,100,691 - -1.6 1,100,691 - +1.9 1,100,805 + CA264_04760 0.13 +1.4 1,100,805 + CA264_04760 0.13 +2.0 1,100,805 + CA264_04760 0.13 +0.2 1,100,903 - CA264_04760 0.24 -2.6 1,101,074 + CA264_04760 0.42 -0.6 1,101,263 - CA264_04760 0.63 +1.4 1,101,378 + CA264_04760 0.76 +0.6 1,101,379 - CA264_04760 0.76 -0.5 1,101,381 + CA264_04760 0.76 +1.2 1,101,381 + CA264_04760 0.76 +0.4 1,101,466 - CA264_04760 0.85 +1.9 1,101,466 - CA264_04760 0.85 +0.3 1,101,477 + CA264_04760 0.86 +1.4 1,101,477 + CA264_04760 0.86 +1.0 1,101,478 - CA264_04760 0.87 -0.3 1,101,478 - CA264_04760 0.87 -0.8 1,101,481 + CA264_04760 0.87 +0.1 1,101,481 + CA264_04760 0.87 -1.4 1,101,481 + CA264_04760 0.87 -1.1 1,101,482 - CA264_04760 0.87 -1.2 1,101,522 + -0.3 1,101,602 + +0.0 1,101,602 + +0.3 1,101,609 - +1.9 1,101,615 - +1.4 1,101,628 + +0.6 1,101,646 + -0.6 1,101,737 - CA264_04765 0.16 +1.4 1,101,737 - CA264_04765 0.16 -0.0 1,101,769 + CA264_04765 0.20 +0.9 1,101,836 + CA264_04765 0.28 +1.3 1,101,836 + CA264_04765 0.28 +0.9 1,101,837 - CA264_04765 0.29 +0.6 1,101,837 - CA264_04765 0.29 +2.3 1,101,837 - CA264_04765 0.29 -1.9 1,101,859 + CA264_04765 0.31 +0.5 1,101,860 - CA264_04765 0.32 -1.5 1,101,873 + CA264_04765 0.33 +1.0 1,101,874 - CA264_04765 0.33 -0.7 1,101,919 + CA264_04765 0.39 -0.0 1,101,956 - CA264_04765 0.44 +0.4 1,102,215 - CA264_04765 0.77 +1.6 1,102,333 - +1.2 1,102,406 + -1.3 1,102,407 - +0.0 1,102,407 - +0.6 1,102,425 - -1.5 1,102,436 + +0.5 1,102,437 - -1.4 1,102,438 + +0.6 1,102,439 - -1.5 1,102,535 + CA264_04770 0.19 -0.4 1,102,536 - CA264_04770 0.20 -0.6 1,102,536 - CA264_04770 0.20 +1.5 1,102,579 + CA264_04770 0.26 -0.9 1,102,580 - CA264_04770 0.26 -0.5
Or see this region's nucleotide sequence