Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04250 and CA264_04255 are separated by 16 nucleotides CA264_04255 and CA264_04260 are separated by 238 nucleotides
CA264_04250: CA264_04250 - NADH oxidoreductase (quinone) subunit F, at 982,438 to 983,739
_04250
CA264_04255: CA264_04255 - NADH-quinone oxidoreductase subunit E, at 983,756 to 984,220
_04255
CA264_04260: CA264_04260 - NADH-quinone oxidoreductase subunit C/D, at 984,459 to 986,207
_04260
Position (kb) 983
984
985 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 982.829 kb on + strand, within CA264_04250 at 982.908 kb on - strand, within CA264_04250 at 983.012 kb on + strand, within CA264_04250 at 983.091 kb on + strand, within CA264_04250 at 983.092 kb on - strand, within CA264_04250 at 983.266 kb on - strand, within CA264_04250 at 983.281 kb on + strand, within CA264_04250 at 983.290 kb on - strand, within CA264_04250 at 983.298 kb on - strand, within CA264_04250 at 983.310 kb on - strand, within CA264_04250 at 983.321 kb on - strand, within CA264_04250 at 983.355 kb on - strand, within CA264_04250 at 983.355 kb on - strand, within CA264_04250 at 983.375 kb on + strand, within CA264_04250 at 983.393 kb on - strand, within CA264_04250 at 983.614 kb on + strand at 983.632 kb on - strand at 983.668 kb on + strand at 983.669 kb on - strand at 983.761 kb on + strand at 983.762 kb on - strand at 983.763 kb on + strand at 983.763 kb on + strand at 983.808 kb on + strand, within CA264_04255 at 983.913 kb on - strand, within CA264_04255 at 983.913 kb on - strand, within CA264_04255 at 983.928 kb on + strand, within CA264_04255 at 983.928 kb on + strand, within CA264_04255 at 983.929 kb on - strand, within CA264_04255 at 983.929 kb on - strand, within CA264_04255 at 983.984 kb on + strand, within CA264_04255 at 983.985 kb on - strand, within CA264_04255 at 983.985 kb on - strand, within CA264_04255 at 984.030 kb on + strand, within CA264_04255 at 984.068 kb on - strand, within CA264_04255 at 984.068 kb on - strand, within CA264_04255 at 984.146 kb on + strand, within CA264_04255 at 984.147 kb on - strand, within CA264_04255 at 984.179 kb on + strand at 984.180 kb on - strand at 984.236 kb on - strand at 984.246 kb on + strand at 984.262 kb on + strand at 984.336 kb on - strand at 984.355 kb on + strand at 984.357 kb on + strand at 984.357 kb on + strand at 984.358 kb on - strand at 984.358 kb on - strand at 984.376 kb on + strand at 984.376 kb on + strand at 984.427 kb on + strand at 984.428 kb on - strand at 984.431 kb on - strand at 984.450 kb on + strand at 984.450 kb on + strand at 984.501 kb on + strand at 984.502 kb on - strand at 984.502 kb on - strand at 984.504 kb on - strand at 984.537 kb on + strand at 984.538 kb on - strand at 984.541 kb on + strand at 984.542 kb on - strand at 984.623 kb on - strand at 984.625 kb on + strand at 984.626 kb on - strand at 984.784 kb on + strand, within CA264_04260 at 984.820 kb on - strand, within CA264_04260 at 984.822 kb on + strand, within CA264_04260 at 984.823 kb on - strand, within CA264_04260 at 984.823 kb on - strand, within CA264_04260 at 984.823 kb on - strand, within CA264_04260 at 984.824 kb on + strand, within CA264_04260 at 984.825 kb on - strand, within CA264_04260 at 984.825 kb on - strand, within CA264_04260 at 984.825 kb on - strand, within CA264_04260 at 984.856 kb on - strand, within CA264_04260 at 985.102 kb on + strand, within CA264_04260
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 982,829 + CA264_04250 0.30 -0.4 982,908 - CA264_04250 0.36 +0.3 983,012 + CA264_04250 0.44 +1.0 983,091 + CA264_04250 0.50 +0.2 983,092 - CA264_04250 0.50 +0.6 983,266 - CA264_04250 0.64 +1.6 983,281 + CA264_04250 0.65 +0.7 983,290 - CA264_04250 0.65 -0.8 983,298 - CA264_04250 0.66 -1.0 983,310 - CA264_04250 0.67 -0.4 983,321 - CA264_04250 0.68 -0.4 983,355 - CA264_04250 0.70 +0.4 983,355 - CA264_04250 0.70 +0.2 983,375 + CA264_04250 0.72 +0.6 983,393 - CA264_04250 0.73 +0.9 983,614 + +1.4 983,632 - -0.1 983,668 + +0.7 983,669 - -0.6 983,761 + -1.2 983,762 - +1.2 983,763 + +0.8 983,763 + -0.7 983,808 + CA264_04255 0.11 -0.4 983,913 - CA264_04255 0.34 -0.7 983,913 - CA264_04255 0.34 +2.2 983,928 + CA264_04255 0.37 -0.7 983,928 + CA264_04255 0.37 +0.1 983,929 - CA264_04255 0.37 +1.3 983,929 - CA264_04255 0.37 -0.9 983,984 + CA264_04255 0.49 -0.9 983,985 - CA264_04255 0.49 +0.0 983,985 - CA264_04255 0.49 +1.3 984,030 + CA264_04255 0.59 -1.6 984,068 - CA264_04255 0.67 -0.0 984,068 - CA264_04255 0.67 -0.6 984,146 + CA264_04255 0.84 +2.7 984,147 - CA264_04255 0.84 -1.3 984,179 + -0.5 984,180 - -0.0 984,236 - -1.8 984,246 + +2.9 984,262 + -1.0 984,336 - -0.5 984,355 + -1.3 984,357 + +0.2 984,357 + -0.0 984,358 - -3.1 984,358 - +0.0 984,376 + -1.1 984,376 + +1.0 984,427 + +1.9 984,428 - +0.3 984,431 - +1.0 984,450 + -0.8 984,450 + -0.7 984,501 + +1.6 984,502 - +2.2 984,502 - -1.1 984,504 - +0.8 984,537 + +0.9 984,538 - -0.5 984,541 + -0.6 984,542 - -0.3 984,623 - +1.5 984,625 + -0.3 984,626 - +1.0 984,784 + CA264_04260 0.19 -0.6 984,820 - CA264_04260 0.21 -0.3 984,822 + CA264_04260 0.21 -1.1 984,823 - CA264_04260 0.21 +1.8 984,823 - CA264_04260 0.21 -0.4 984,823 - CA264_04260 0.21 +0.3 984,824 + CA264_04260 0.21 -0.1 984,825 - CA264_04260 0.21 +3.2 984,825 - CA264_04260 0.21 +2.6 984,825 - CA264_04260 0.21 +1.6 984,856 - CA264_04260 0.23 +0.7 985,102 + CA264_04260 0.37 -1.1
Or see this region's nucleotide sequence