Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03595 and CA264_03600 are separated by 524 nucleotides CA264_03600 and CA264_03605 are separated by 287 nucleotides CA264_03605 and CA264_03610 are separated by 69 nucleotides
CA264_03595: CA264_03595 - sodium:alanine symporter, at 836,935 to 838,389
_03595
CA264_03600: CA264_03600 - ATP-dependent helicase HrpB, at 838,914 to 841,460
_03600
CA264_03605: CA264_03605 - DNA-binding protein, at 841,748 to 842,206
_03605
CA264_03610: CA264_03610 - hypothetical protein, at 842,276 to 842,503
_03610
Position (kb)
838
839
840
841
842 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 837.971 kb on + strand, within CA264_03595 at 838.002 kb on - strand, within CA264_03595 at 838.002 kb on - strand, within CA264_03595 at 838.004 kb on + strand, within CA264_03595 at 838.004 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.046 kb on + strand, within CA264_03595 at 838.047 kb on - strand, within CA264_03595 at 838.047 kb on - strand, within CA264_03595 at 838.047 kb on - strand, within CA264_03595 at 838.047 kb on - strand, within CA264_03595 at 838.048 kb on + strand, within CA264_03595 at 838.062 kb on + strand, within CA264_03595 at 838.063 kb on - strand, within CA264_03595 at 838.074 kb on - strand, within CA264_03595 at 838.074 kb on - strand, within CA264_03595 at 838.310 kb on + strand at 838.310 kb on + strand at 838.333 kb on + strand at 838.333 kb on + strand at 838.396 kb on + strand at 838.397 kb on - strand at 838.437 kb on + strand at 838.494 kb on + strand at 838.495 kb on - strand at 838.495 kb on - strand at 838.517 kb on + strand at 838.550 kb on + strand at 838.592 kb on - strand at 838.593 kb on + strand at 838.645 kb on + strand at 838.699 kb on - strand at 838.757 kb on - strand at 838.785 kb on + strand at 838.785 kb on + strand at 838.786 kb on - strand at 838.820 kb on - strand at 838.852 kb on + strand at 838.852 kb on + strand at 838.874 kb on + strand at 838.875 kb on - strand at 839.055 kb on + strand at 839.367 kb on - strand, within CA264_03600 at 839.521 kb on - strand, within CA264_03600 at 839.521 kb on - strand, within CA264_03600 at 839.562 kb on + strand, within CA264_03600 at 839.637 kb on + strand, within CA264_03600 at 839.638 kb on - strand, within CA264_03600 at 839.638 kb on - strand, within CA264_03600 at 839.638 kb on - strand, within CA264_03600 at 839.678 kb on + strand, within CA264_03600 at 839.740 kb on + strand, within CA264_03600 at 839.793 kb on + strand, within CA264_03600 at 839.843 kb on - strand, within CA264_03600 at 839.934 kb on + strand, within CA264_03600 at 839.996 kb on + strand, within CA264_03600 at 839.996 kb on + strand, within CA264_03600 at 839.996 kb on + strand, within CA264_03600 at 839.997 kb on - strand, within CA264_03600 at 840.325 kb on - strand, within CA264_03600 at 840.570 kb on + strand, within CA264_03600 at 840.586 kb on - strand, within CA264_03600 at 840.588 kb on - strand, within CA264_03600 at 840.588 kb on - strand, within CA264_03600 at 840.588 kb on - strand at 840.588 kb on - strand, within CA264_03600 at 840.687 kb on + strand, within CA264_03600 at 840.813 kb on + strand, within CA264_03600 at 841.143 kb on + strand, within CA264_03600 at 841.143 kb on + strand, within CA264_03600 at 841.144 kb on - strand, within CA264_03600 at 841.144 kb on - strand, within CA264_03600 at 841.161 kb on + strand, within CA264_03600 at 841.230 kb on - strand at 841.338 kb on - strand at 841.460 kb on + strand at 841.461 kb on - strand at 841.461 kb on - strand at 841.461 kb on - strand at 841.521 kb on - strand at 841.574 kb on + strand at 841.670 kb on + strand at 841.671 kb on - strand at 841.682 kb on + strand at 841.683 kb on - strand at 841.683 kb on - strand at 841.683 kb on - strand at 841.684 kb on + strand at 841.685 kb on - strand at 841.707 kb on + strand at 841.746 kb on - strand at 841.750 kb on - strand at 842.004 kb on - strand, within CA264_03605 at 842.051 kb on - strand, within CA264_03605 at 842.067 kb on + strand, within CA264_03605 at 842.232 kb on - strand at 842.232 kb on - strand at 842.234 kb on + strand at 842.238 kb on - strand at 842.239 kb on + strand at 842.240 kb on - strand at 842.240 kb on - strand at 842.255 kb on + strand at 842.263 kb on + strand at 842.263 kb on + strand at 842.277 kb on + strand at 842.278 kb on - strand at 842.396 kb on - strand, within CA264_03610 at 842.446 kb on + strand, within CA264_03610 at 842.447 kb on - strand, within CA264_03610 at 842.453 kb on + strand, within CA264_03610 at 842.453 kb on + strand, within CA264_03610 at 842.454 kb on - strand, within CA264_03610
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 837,971 + CA264_03595 0.71 +0.3 838,002 - CA264_03595 0.73 +1.5 838,002 - CA264_03595 0.73 +0.7 838,004 + CA264_03595 0.73 -1.2 838,004 + CA264_03595 0.73 -2.5 838,046 + CA264_03595 0.76 +0.5 838,046 + CA264_03595 0.76 -1.1 838,046 + CA264_03595 0.76 -2.7 838,046 + CA264_03595 0.76 -1.2 838,046 + CA264_03595 0.76 +2.1 838,046 + CA264_03595 0.76 +1.2 838,046 + CA264_03595 0.76 +1.1 838,047 - CA264_03595 0.76 -1.1 838,047 - CA264_03595 0.76 -0.5 838,047 - CA264_03595 0.76 -0.8 838,047 - CA264_03595 0.76 -1.7 838,048 + CA264_03595 0.76 -0.1 838,062 + CA264_03595 0.77 +0.0 838,063 - CA264_03595 0.78 -1.4 838,074 - CA264_03595 0.78 +0.3 838,074 - CA264_03595 0.78 -1.2 838,310 + +0.7 838,310 + -0.0 838,333 + +0.7 838,333 + -1.1 838,396 + -1.3 838,397 - +0.8 838,437 + -0.1 838,494 + -1.5 838,495 - +0.5 838,495 - -0.1 838,517 + +1.6 838,550 + +1.3 838,592 - +0.5 838,593 + +0.2 838,645 + -1.3 838,699 - +5.1 838,757 - +1.0 838,785 + +0.7 838,785 + -1.1 838,786 - -0.5 838,820 - -1.7 838,852 + +1.9 838,852 + +1.5 838,874 + -0.6 838,875 - -1.3 839,055 + -0.3 839,367 - CA264_03600 0.18 +0.4 839,521 - CA264_03600 0.24 -2.4 839,521 - CA264_03600 0.24 +0.9 839,562 + CA264_03600 0.25 -1.5 839,637 + CA264_03600 0.28 -1.1 839,638 - CA264_03600 0.28 +2.1 839,638 - CA264_03600 0.28 +1.1 839,638 - CA264_03600 0.28 +1.2 839,678 + CA264_03600 0.30 -0.3 839,740 + CA264_03600 0.32 +2.6 839,793 + CA264_03600 0.35 -1.8 839,843 - CA264_03600 0.36 +0.4 839,934 + CA264_03600 0.40 -0.4 839,996 + CA264_03600 0.42 +0.7 839,996 + CA264_03600 0.42 -0.9 839,996 + CA264_03600 0.42 +1.2 839,997 - CA264_03600 0.43 -3.0 840,325 - CA264_03600 0.55 -1.2 840,570 + CA264_03600 0.65 -0.0 840,586 - CA264_03600 0.66 -0.5 840,588 - CA264_03600 0.66 +1.5 840,588 - CA264_03600 0.66 -1.7 840,588 - +2.1 840,588 - CA264_03600 0.66 -0.3 840,687 + CA264_03600 0.70 +0.4 840,813 + CA264_03600 0.75 +0.4 841,143 + CA264_03600 0.88 +0.3 841,143 + CA264_03600 0.88 -1.1 841,144 - CA264_03600 0.88 -0.9 841,144 - CA264_03600 0.88 +0.4 841,161 + CA264_03600 0.88 +1.5 841,230 - +0.5 841,338 - +0.4 841,460 + +0.9 841,461 - -1.1 841,461 - -0.6 841,461 - +1.3 841,521 - +0.3 841,574 + -1.9 841,670 + -0.7 841,671 - +0.0 841,682 + +0.4 841,683 - +1.5 841,683 - -1.3 841,683 - -0.2 841,684 + +1.3 841,685 - -0.6 841,707 + -0.5 841,746 - +0.4 841,750 - +1.2 842,004 - CA264_03605 0.56 -0.2 842,051 - CA264_03605 0.66 -0.9 842,067 + CA264_03605 0.69 +0.5 842,232 - -0.1 842,232 - +0.3 842,234 + -0.3 842,238 - -0.5 842,239 + -1.3 842,240 - -1.0 842,240 - -0.0 842,255 + +1.3 842,263 + +0.9 842,263 + +1.7 842,277 + +0.8 842,278 - +0.9 842,396 - CA264_03610 0.53 +0.1 842,446 + CA264_03610 0.75 +2.0 842,447 - CA264_03610 0.75 +2.5 842,453 + CA264_03610 0.78 +1.5 842,453 + CA264_03610 0.78 +0.4 842,454 - CA264_03610 0.78 +1.6
Or see this region's nucleotide sequence