Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03425 and CA264_03430 are separated by 11 nucleotides CA264_03430 and CA264_03435 are separated by 301 nucleotides
CA264_03425: CA264_03425 - glutathione-dependent formaldehyde dehydrogenase, at 798,694 to 799,848
_03425
CA264_03430: CA264_03430 - hypothetical protein, at 799,860 to 800,345
_03430
CA264_03435: CA264_03435 - hypothetical protein, at 800,647 to 801,348
_03435
Position (kb) 799
800
801 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 798.890 kb on + strand, within CA264_03425 at 798.944 kb on + strand, within CA264_03425 at 798.951 kb on + strand, within CA264_03425 at 798.972 kb on + strand, within CA264_03425 at 798.973 kb on - strand, within CA264_03425 at 798.995 kb on - strand, within CA264_03425 at 799.052 kb on - strand, within CA264_03425 at 799.052 kb on - strand, within CA264_03425 at 799.061 kb on + strand, within CA264_03425 at 799.075 kb on - strand, within CA264_03425 at 799.093 kb on + strand, within CA264_03425 at 799.108 kb on + strand, within CA264_03425 at 799.164 kb on - strand, within CA264_03425 at 799.217 kb on + strand, within CA264_03425 at 799.217 kb on + strand, within CA264_03425 at 799.218 kb on - strand, within CA264_03425 at 799.218 kb on - strand, within CA264_03425 at 799.218 kb on - strand, within CA264_03425 at 799.242 kb on - strand, within CA264_03425 at 799.264 kb on - strand, within CA264_03425 at 799.387 kb on - strand, within CA264_03425 at 799.476 kb on + strand, within CA264_03425 at 799.477 kb on - strand, within CA264_03425 at 799.477 kb on - strand, within CA264_03425 at 799.477 kb on - strand, within CA264_03425 at 799.480 kb on - strand, within CA264_03425 at 799.480 kb on - strand, within CA264_03425 at 799.804 kb on - strand at 799.839 kb on + strand at 799.839 kb on + strand at 799.839 kb on + strand at 799.859 kb on + strand at 799.859 kb on + strand at 799.859 kb on + strand at 799.881 kb on + strand at 799.881 kb on + strand at 799.881 kb on + strand at 799.882 kb on - strand at 799.889 kb on + strand at 799.890 kb on - strand at 799.890 kb on - strand at 799.890 kb on - strand at 799.890 kb on - strand at 800.012 kb on + strand, within CA264_03430 at 800.012 kb on - strand, within CA264_03430 at 800.012 kb on - strand, within CA264_03430 at 800.111 kb on + strand, within CA264_03430 at 800.111 kb on + strand, within CA264_03430 at 800.111 kb on + strand, within CA264_03430 at 800.112 kb on - strand, within CA264_03430 at 800.112 kb on - strand, within CA264_03430 at 800.112 kb on - strand, within CA264_03430 at 800.112 kb on - strand, within CA264_03430 at 800.116 kb on - strand, within CA264_03430 at 800.116 kb on - strand, within CA264_03430 at 800.150 kb on + strand, within CA264_03430 at 800.150 kb on + strand, within CA264_03430 at 800.151 kb on - strand, within CA264_03430 at 800.167 kb on + strand, within CA264_03430 at 800.258 kb on + strand, within CA264_03430 at 800.259 kb on - strand, within CA264_03430 at 800.259 kb on - strand, within CA264_03430 at 800.344 kb on - strand at 800.386 kb on + strand at 800.386 kb on + strand at 800.386 kb on + strand at 800.387 kb on - strand at 800.465 kb on + strand at 800.475 kb on + strand at 800.478 kb on + strand at 800.492 kb on - strand at 800.521 kb on + strand at 800.521 kb on + strand at 800.521 kb on + strand at 800.521 kb on + strand at 800.530 kb on - strand at 800.535 kb on - strand at 800.535 kb on - strand at 800.546 kb on + strand at 800.547 kb on - strand at 800.547 kb on - strand at 800.567 kb on + strand at 800.567 kb on + strand at 800.569 kb on + strand at 800.574 kb on + strand at 800.574 kb on + strand at 800.575 kb on - strand at 800.614 kb on - strand at 800.618 kb on + strand at 800.618 kb on + strand at 800.619 kb on - strand at 800.619 kb on - strand at 800.621 kb on - strand at 800.658 kb on + strand at 800.811 kb on - strand, within CA264_03435 at 800.846 kb on - strand, within CA264_03435 at 800.857 kb on + strand, within CA264_03435 at 800.977 kb on + strand, within CA264_03435 at 801.040 kb on + strand, within CA264_03435 at 801.041 kb on - strand, within CA264_03435 at 801.043 kb on + strand, within CA264_03435 at 801.080 kb on - strand, within CA264_03435 at 801.080 kb on - strand, within CA264_03435 at 801.128 kb on + strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.183 kb on + strand, within CA264_03435 at 801.195 kb on + strand, within CA264_03435 at 801.196 kb on - strand, within CA264_03435 at 801.196 kb on - strand, within CA264_03435 at 801.287 kb on + strand at 801.288 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 798,890 + CA264_03425 0.17 +0.5 798,944 + CA264_03425 0.22 -1.9 798,951 + CA264_03425 0.22 -0.7 798,972 + CA264_03425 0.24 -0.8 798,973 - CA264_03425 0.24 +1.7 798,995 - CA264_03425 0.26 -1.4 799,052 - CA264_03425 0.31 +0.5 799,052 - CA264_03425 0.31 -1.2 799,061 + CA264_03425 0.32 -0.0 799,075 - CA264_03425 0.33 -0.2 799,093 + CA264_03425 0.35 -1.3 799,108 + CA264_03425 0.36 -0.9 799,164 - CA264_03425 0.41 -0.0 799,217 + CA264_03425 0.45 +0.5 799,217 + CA264_03425 0.45 +0.6 799,218 - CA264_03425 0.45 +0.3 799,218 - CA264_03425 0.45 +0.4 799,218 - CA264_03425 0.45 -3.0 799,242 - CA264_03425 0.47 +0.2 799,264 - CA264_03425 0.49 -0.4 799,387 - CA264_03425 0.60 -0.4 799,476 + CA264_03425 0.68 +0.5 799,477 - CA264_03425 0.68 +0.3 799,477 - CA264_03425 0.68 -1.0 799,477 - CA264_03425 0.68 +1.4 799,480 - CA264_03425 0.68 -0.4 799,480 - CA264_03425 0.68 -1.3 799,804 - -0.3 799,839 + +3.2 799,839 + -0.3 799,839 + -1.7 799,859 + -1.4 799,859 + +0.9 799,859 + -0.0 799,881 + +0.1 799,881 + -0.2 799,881 + -1.4 799,882 - -0.2 799,889 + +1.3 799,890 - -0.5 799,890 - -0.1 799,890 - +0.6 799,890 - +1.5 800,012 + CA264_03430 0.31 +0.2 800,012 - CA264_03430 0.31 -1.0 800,012 - CA264_03430 0.31 +4.9 800,111 + CA264_03430 0.52 +0.9 800,111 + CA264_03430 0.52 +2.1 800,111 + CA264_03430 0.52 -0.4 800,112 - CA264_03430 0.52 -0.7 800,112 - CA264_03430 0.52 -1.3 800,112 - CA264_03430 0.52 -2.1 800,112 - CA264_03430 0.52 +0.1 800,116 - CA264_03430 0.53 -2.4 800,116 - CA264_03430 0.53 -1.5 800,150 + CA264_03430 0.60 -2.0 800,150 + CA264_03430 0.60 +1.8 800,151 - CA264_03430 0.60 -1.9 800,167 + CA264_03430 0.63 +0.5 800,258 + CA264_03430 0.82 -0.3 800,259 - CA264_03430 0.82 -0.4 800,259 - CA264_03430 0.82 +0.6 800,344 - +0.0 800,386 + -0.1 800,386 + -0.6 800,386 + +0.2 800,387 - +0.4 800,465 + -0.1 800,475 + +1.8 800,478 + -0.4 800,492 - -2.1 800,521 + -0.2 800,521 + -0.3 800,521 + -2.0 800,521 + +2.4 800,530 - -1.6 800,535 - -0.9 800,535 - -0.6 800,546 + -1.3 800,547 - -1.3 800,547 - +0.1 800,567 + +0.2 800,567 + -1.7 800,569 + +1.1 800,574 + -1.7 800,574 + -0.9 800,575 - +2.9 800,614 - -0.0 800,618 + -0.1 800,618 + +1.8 800,619 - +0.2 800,619 - -0.8 800,621 - +1.6 800,658 + -0.2 800,811 - CA264_03435 0.23 -1.3 800,846 - CA264_03435 0.28 -2.8 800,857 + CA264_03435 0.30 -0.6 800,977 + CA264_03435 0.47 -0.2 801,040 + CA264_03435 0.56 -0.9 801,041 - CA264_03435 0.56 -0.0 801,043 + CA264_03435 0.56 -1.1 801,080 - CA264_03435 0.62 +0.6 801,080 - CA264_03435 0.62 +0.3 801,128 + CA264_03435 0.69 -1.1 801,129 - CA264_03435 0.69 -0.2 801,129 - CA264_03435 0.69 +1.8 801,129 - CA264_03435 0.69 +0.6 801,183 + CA264_03435 0.76 -0.5 801,195 + CA264_03435 0.78 -1.8 801,196 - CA264_03435 0.78 -0.4 801,196 - CA264_03435 0.78 -0.8 801,287 + +0.8 801,288 - -1.1
Or see this region's nucleotide sequence