Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03345 and CA264_03350 overlap by 14 nucleotides CA264_03350 and CA264_03355 are separated by 98 nucleotides
CA264_03345: CA264_03345 - hypothetical protein, at 783,197 to 784,594
_03345
CA264_03350: CA264_03350 - RNA polymerase subunit sigma-24, at 784,581 to 785,180
_03350
CA264_03355: CA264_03355 - VWA domain-containing protein, at 785,279 to 787,144
_03355
Position (kb) 784
785
786 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 783.603 kb on + strand, within CA264_03345 at 783.649 kb on - strand, within CA264_03345 at 783.669 kb on - strand, within CA264_03345 at 784.000 kb on + strand, within CA264_03345 at 784.059 kb on - strand, within CA264_03345 at 784.059 kb on - strand, within CA264_03345 at 784.095 kb on + strand, within CA264_03345 at 784.096 kb on - strand, within CA264_03345 at 784.112 kb on - strand, within CA264_03345 at 784.156 kb on + strand, within CA264_03345 at 784.168 kb on + strand, within CA264_03345 at 784.169 kb on - strand, within CA264_03345 at 784.197 kb on - strand, within CA264_03345 at 784.220 kb on + strand, within CA264_03345 at 784.221 kb on - strand, within CA264_03345 at 784.238 kb on + strand, within CA264_03345 at 784.238 kb on + strand, within CA264_03345 at 784.239 kb on - strand, within CA264_03345 at 784.239 kb on - strand, within CA264_03345 at 784.239 kb on - strand, within CA264_03345 at 784.266 kb on + strand, within CA264_03345 at 784.273 kb on - strand, within CA264_03345 at 784.275 kb on + strand, within CA264_03345 at 784.305 kb on - strand, within CA264_03345 at 784.305 kb on - strand, within CA264_03345 at 784.365 kb on - strand, within CA264_03345 at 784.377 kb on - strand, within CA264_03345 at 784.377 kb on - strand, within CA264_03345 at 784.571 kb on + strand at 784.571 kb on + strand at 784.572 kb on - strand at 784.583 kb on - strand at 784.642 kb on + strand, within CA264_03350 at 784.692 kb on - strand, within CA264_03350 at 784.693 kb on + strand, within CA264_03350 at 784.730 kb on + strand, within CA264_03350 at 784.732 kb on + strand, within CA264_03350 at 784.732 kb on + strand, within CA264_03350 at 784.732 kb on + strand, within CA264_03350 at 784.732 kb on + strand, within CA264_03350 at 784.945 kb on - strand, within CA264_03350 at 785.044 kb on + strand, within CA264_03350 at 785.188 kb on - strand at 785.190 kb on - strand at 785.190 kb on - strand at 785.236 kb on - strand at 785.255 kb on + strand at 785.255 kb on + strand at 785.256 kb on - strand at 785.451 kb on - strand at 785.459 kb on + strand at 785.460 kb on - strand at 785.529 kb on + strand, within CA264_03355 at 785.529 kb on + strand, within CA264_03355 at 785.530 kb on - strand, within CA264_03355 at 785.530 kb on - strand, within CA264_03355 at 785.559 kb on + strand, within CA264_03355 at 785.559 kb on + strand, within CA264_03355 at 785.559 kb on + strand, within CA264_03355 at 785.560 kb on - strand, within CA264_03355 at 785.627 kb on - strand, within CA264_03355 at 785.627 kb on - strand, within CA264_03355 at 785.679 kb on - strand, within CA264_03355 at 785.691 kb on - strand, within CA264_03355 at 785.732 kb on + strand, within CA264_03355 at 785.733 kb on - strand, within CA264_03355 at 785.739 kb on - strand, within CA264_03355 at 785.767 kb on + strand, within CA264_03355 at 785.863 kb on - strand, within CA264_03355 at 785.894 kb on + strand, within CA264_03355 at 785.894 kb on + strand, within CA264_03355 at 785.895 kb on - strand, within CA264_03355 at 785.899 kb on + strand, within CA264_03355 at 785.899 kb on + strand, within CA264_03355 at 785.903 kb on + strand, within CA264_03355 at 785.903 kb on + strand, within CA264_03355 at 785.903 kb on + strand, within CA264_03355 at 785.904 kb on - strand, within CA264_03355 at 785.904 kb on - strand, within CA264_03355 at 785.904 kb on - strand, within CA264_03355 at 785.904 kb on - strand, within CA264_03355 at 785.946 kb on - strand, within CA264_03355 at 786.170 kb on + strand, within CA264_03355 at 786.170 kb on + strand, within CA264_03355
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 783,603 + CA264_03345 0.29 -0.4 783,649 - CA264_03345 0.32 -2.1 783,669 - CA264_03345 0.34 +0.3 784,000 + CA264_03345 0.57 -2.5 784,059 - CA264_03345 0.62 -1.0 784,059 - CA264_03345 0.62 -1.2 784,095 + CA264_03345 0.64 +0.5 784,096 - CA264_03345 0.64 +1.0 784,112 - CA264_03345 0.65 +2.0 784,156 + CA264_03345 0.69 +0.0 784,168 + CA264_03345 0.69 +2.7 784,169 - CA264_03345 0.70 +3.2 784,197 - CA264_03345 0.72 -0.9 784,220 + CA264_03345 0.73 -1.8 784,221 - CA264_03345 0.73 -1.2 784,238 + CA264_03345 0.74 +0.9 784,238 + CA264_03345 0.74 +0.1 784,239 - CA264_03345 0.75 +0.8 784,239 - CA264_03345 0.75 +0.7 784,239 - CA264_03345 0.75 +4.7 784,266 + CA264_03345 0.76 -0.1 784,273 - CA264_03345 0.77 +0.7 784,275 + CA264_03345 0.77 -1.5 784,305 - CA264_03345 0.79 -1.1 784,305 - CA264_03345 0.79 +1.8 784,365 - CA264_03345 0.84 +1.2 784,377 - CA264_03345 0.84 +1.2 784,377 - CA264_03345 0.84 -1.8 784,571 + -0.3 784,571 + +1.5 784,572 - -1.3 784,583 - +2.8 784,642 + CA264_03350 0.10 +0.3 784,692 - CA264_03350 0.18 -1.1 784,693 + CA264_03350 0.19 -1.1 784,730 + CA264_03350 0.25 -0.9 784,732 + CA264_03350 0.25 +1.3 784,732 + CA264_03350 0.25 -1.4 784,732 + CA264_03350 0.25 -1.3 784,732 + CA264_03350 0.25 -1.5 784,945 - CA264_03350 0.61 +1.9 785,044 + CA264_03350 0.77 -2.4 785,188 - -3.3 785,190 - +0.2 785,190 - -0.3 785,236 - -0.9 785,255 + -0.8 785,255 + -0.5 785,256 - +0.0 785,451 - -2.1 785,459 + +2.0 785,460 - +3.0 785,529 + CA264_03355 0.13 +1.9 785,529 + CA264_03355 0.13 +1.2 785,530 - CA264_03355 0.13 +0.7 785,530 - CA264_03355 0.13 -0.7 785,559 + CA264_03355 0.15 -0.3 785,559 + CA264_03355 0.15 +0.3 785,559 + CA264_03355 0.15 +0.0 785,560 - CA264_03355 0.15 +1.5 785,627 - CA264_03355 0.19 -1.0 785,627 - CA264_03355 0.19 -2.8 785,679 - CA264_03355 0.21 +3.6 785,691 - CA264_03355 0.22 -1.1 785,732 + CA264_03355 0.24 +0.5 785,733 - CA264_03355 0.24 +1.5 785,739 - CA264_03355 0.25 +0.7 785,767 + CA264_03355 0.26 -0.4 785,863 - CA264_03355 0.31 -1.0 785,894 + CA264_03355 0.33 +1.5 785,894 + CA264_03355 0.33 +1.3 785,895 - CA264_03355 0.33 -2.5 785,899 + CA264_03355 0.33 +1.2 785,899 + CA264_03355 0.33 -0.2 785,903 + CA264_03355 0.33 -2.2 785,903 + CA264_03355 0.33 +0.5 785,903 + CA264_03355 0.33 +0.6 785,904 - CA264_03355 0.33 -0.5 785,904 - CA264_03355 0.33 +2.7 785,904 - CA264_03355 0.33 +1.2 785,904 - CA264_03355 0.33 -0.0 785,946 - CA264_03355 0.36 +1.0 786,170 + CA264_03355 0.48 +0.3 786,170 + CA264_03355 0.48 +0.4
Or see this region's nucleotide sequence