Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03335 and CA264_03340 are separated by 1 nucleotides CA264_03340 and CA264_03345 are separated by 545 nucleotides
CA264_03335: CA264_03335 - glyoxylate/hydroxypyruvate reductase A, at 781,307 to 782,236
_03335
CA264_03340: CA264_03340 - dioxygenase, at 782,238 to 782,651
_03340
CA264_03345: CA264_03345 - hypothetical protein, at 783,197 to 784,594
_03345
Position (kb) 782
783 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 781.269 kb on + strand at 781.304 kb on + strand at 781.304 kb on + strand at 781.304 kb on + strand at 781.305 kb on - strand at 781.305 kb on - strand at 781.317 kb on + strand at 781.318 kb on - strand at 781.318 kb on - strand at 781.318 kb on - strand at 781.318 kb on - strand at 781.320 kb on + strand at 781.321 kb on - strand at 781.323 kb on + strand at 781.324 kb on - strand at 781.327 kb on + strand at 781.328 kb on - strand at 781.472 kb on + strand, within CA264_03335 at 781.570 kb on - strand, within CA264_03335 at 781.646 kb on + strand, within CA264_03335 at 781.647 kb on - strand, within CA264_03335 at 781.688 kb on + strand, within CA264_03335 at 781.689 kb on - strand, within CA264_03335 at 781.689 kb on - strand, within CA264_03335 at 781.782 kb on + strand, within CA264_03335 at 781.827 kb on + strand, within CA264_03335 at 781.830 kb on - strand, within CA264_03335 at 781.918 kb on - strand, within CA264_03335 at 781.959 kb on - strand, within CA264_03335 at 781.963 kb on + strand, within CA264_03335 at 781.964 kb on - strand, within CA264_03335 at 782.166 kb on + strand at 782.174 kb on + strand at 782.234 kb on + strand at 782.235 kb on - strand at 782.235 kb on - strand at 782.296 kb on - strand, within CA264_03340 at 782.303 kb on + strand, within CA264_03340 at 782.304 kb on - strand, within CA264_03340 at 782.306 kb on - strand, within CA264_03340 at 782.409 kb on + strand, within CA264_03340 at 782.410 kb on - strand, within CA264_03340 at 782.422 kb on + strand, within CA264_03340 at 782.460 kb on - strand, within CA264_03340 at 782.480 kb on + strand, within CA264_03340 at 782.481 kb on - strand, within CA264_03340 at 782.513 kb on + strand, within CA264_03340 at 782.514 kb on - strand, within CA264_03340 at 782.536 kb on - strand, within CA264_03340 at 782.666 kb on + strand at 782.932 kb on - strand at 782.946 kb on + strand at 782.964 kb on + strand at 782.973 kb on + strand at 782.977 kb on + strand at 782.977 kb on + strand at 782.978 kb on - strand at 782.990 kb on + strand at 782.997 kb on + strand at 782.998 kb on - strand at 783.005 kb on - strand at 783.012 kb on + strand at 783.012 kb on + strand at 783.012 kb on + strand at 783.012 kb on + strand at 783.014 kb on + strand at 783.014 kb on + strand at 783.015 kb on - strand at 783.015 kb on - strand at 783.021 kb on - strand at 783.028 kb on - strand at 783.136 kb on + strand at 783.137 kb on - strand at 783.137 kb on - strand at 783.137 kb on - strand at 783.137 kb on - strand at 783.137 kb on - strand at 783.140 kb on - strand at 783.140 kb on - strand at 783.199 kb on - strand at 783.199 kb on - strand at 783.203 kb on - strand at 783.214 kb on + strand at 783.214 kb on + strand at 783.381 kb on - strand, within CA264_03345 at 783.381 kb on - strand, within CA264_03345 at 783.509 kb on + strand, within CA264_03345 at 783.603 kb on + strand, within CA264_03345 at 783.649 kb on - strand, within CA264_03345
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 781,269 + +2.9 781,304 + +1.0 781,304 + -0.6 781,304 + +0.7 781,305 - +0.6 781,305 - +1.2 781,317 + +2.5 781,318 - -1.3 781,318 - +0.1 781,318 - -0.6 781,318 - -1.5 781,320 + -0.7 781,321 - -0.9 781,323 + -1.6 781,324 - +1.2 781,327 + -1.0 781,328 - -0.9 781,472 + CA264_03335 0.18 -0.7 781,570 - CA264_03335 0.28 -1.5 781,646 + CA264_03335 0.36 +0.1 781,647 - CA264_03335 0.37 -1.1 781,688 + CA264_03335 0.41 +2.4 781,689 - CA264_03335 0.41 -0.5 781,689 - CA264_03335 0.41 +2.3 781,782 + CA264_03335 0.51 -1.4 781,827 + CA264_03335 0.56 +0.1 781,830 - CA264_03335 0.56 -0.5 781,918 - CA264_03335 0.66 -0.8 781,959 - CA264_03335 0.70 -0.9 781,963 + CA264_03335 0.71 -1.6 781,964 - CA264_03335 0.71 -1.3 782,166 + +0.2 782,174 + -0.2 782,234 + +0.5 782,235 - +0.3 782,235 - -1.2 782,296 - CA264_03340 0.14 +0.2 782,303 + CA264_03340 0.16 +0.3 782,304 - CA264_03340 0.16 +1.3 782,306 - CA264_03340 0.16 +0.2 782,409 + CA264_03340 0.41 +3.1 782,410 - CA264_03340 0.42 -1.6 782,422 + CA264_03340 0.44 +0.5 782,460 - CA264_03340 0.54 +1.5 782,480 + CA264_03340 0.58 -1.7 782,481 - CA264_03340 0.59 -0.7 782,513 + CA264_03340 0.66 -0.7 782,514 - CA264_03340 0.67 -1.2 782,536 - CA264_03340 0.72 -0.6 782,666 + -0.5 782,932 - +0.2 782,946 + -0.2 782,964 + +0.1 782,973 + +1.4 782,977 + -1.4 782,977 + -0.7 782,978 - -1.1 782,990 + -0.3 782,997 + +0.1 782,998 - +1.3 783,005 - -1.5 783,012 + +0.9 783,012 + +1.8 783,012 + -1.6 783,012 + -0.2 783,014 + +4.0 783,014 + -1.4 783,015 - +1.7 783,015 - -0.1 783,021 - -0.3 783,028 - +0.2 783,136 + +0.5 783,137 - +1.3 783,137 - +1.0 783,137 - -0.5 783,137 - +2.8 783,137 - +0.7 783,140 - -2.4 783,140 - -0.4 783,199 - +2.6 783,199 - +0.8 783,203 - +0.3 783,214 + +0.2 783,214 + -0.1 783,381 - CA264_03345 0.13 -1.1 783,381 - CA264_03345 0.13 +1.2 783,509 + CA264_03345 0.22 +1.0 783,603 + CA264_03345 0.29 -0.4 783,649 - CA264_03345 0.32 -2.1
Or see this region's nucleotide sequence