Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02895 and CA264_02900 are separated by 32 nucleotides CA264_02900 and CA264_02905 are separated by 90 nucleotides CA264_02905 and CA264_02910 are separated by 103 nucleotides CA264_02910 and CA264_02915 are separated by 132 nucleotides
CA264_02895: CA264_02895 - alpha/beta hydrolase, at 660,679 to 661,674
_02895
CA264_02900: CA264_02900 - hypothetical protein, at 661,707 to 661,934
_02900
CA264_02905: CA264_02905 - hypothetical protein, at 662,025 to 662,831
_02905
CA264_02910: CA264_02910 - hypothetical protein, at 662,935 to 663,306
_02910
CA264_02915: CA264_02915 - hypothetical protein, at 663,439 to 663,819
_02915
Position (kb) 662
663 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 661.126 kb on - strand, within CA264_02895 at 661.199 kb on - strand, within CA264_02895 at 661.216 kb on + strand, within CA264_02895 at 661.217 kb on - strand, within CA264_02895 at 661.237 kb on + strand, within CA264_02895 at 661.237 kb on + strand, within CA264_02895 at 661.291 kb on + strand, within CA264_02895 at 661.295 kb on - strand, within CA264_02895 at 661.295 kb on - strand, within CA264_02895 at 661.295 kb on - strand, within CA264_02895 at 661.396 kb on + strand, within CA264_02895 at 661.396 kb on + strand, within CA264_02895 at 661.396 kb on + strand, within CA264_02895 at 661.426 kb on + strand, within CA264_02895 at 661.442 kb on + strand, within CA264_02895 at 661.443 kb on - strand, within CA264_02895 at 661.467 kb on - strand, within CA264_02895 at 661.502 kb on - strand, within CA264_02895 at 661.503 kb on + strand, within CA264_02895 at 661.505 kb on + strand, within CA264_02895 at 661.505 kb on + strand, within CA264_02895 at 661.506 kb on - strand, within CA264_02895 at 661.506 kb on - strand, within CA264_02895 at 661.506 kb on - strand, within CA264_02895 at 661.550 kb on + strand, within CA264_02895 at 661.615 kb on - strand at 661.615 kb on - strand at 661.615 kb on - strand at 661.616 kb on + strand at 661.617 kb on - strand at 661.617 kb on - strand at 661.807 kb on + strand, within CA264_02900 at 661.808 kb on - strand, within CA264_02900 at 661.808 kb on - strand, within CA264_02900 at 661.874 kb on + strand, within CA264_02900 at 661.875 kb on - strand, within CA264_02900 at 661.916 kb on - strand at 661.918 kb on - strand at 661.943 kb on - strand at 661.944 kb on + strand at 661.975 kb on + strand at 662.002 kb on + strand at 662.002 kb on + strand at 662.002 kb on + strand at 662.003 kb on - strand at 662.019 kb on - strand at 662.085 kb on + strand at 662.085 kb on + strand at 662.086 kb on - strand at 662.086 kb on - strand at 662.086 kb on - strand at 662.087 kb on + strand at 662.087 kb on + strand at 662.087 kb on + strand at 662.087 kb on + strand at 662.088 kb on - strand at 662.088 kb on - strand at 662.093 kb on + strand at 662.094 kb on - strand at 662.196 kb on + strand, within CA264_02905 at 662.197 kb on - strand, within CA264_02905 at 662.197 kb on - strand, within CA264_02905 at 662.197 kb on - strand, within CA264_02905 at 662.236 kb on + strand, within CA264_02905 at 662.241 kb on + strand, within CA264_02905 at 662.242 kb on - strand, within CA264_02905 at 662.355 kb on + strand, within CA264_02905 at 662.356 kb on - strand, within CA264_02905 at 662.356 kb on - strand, within CA264_02905 at 662.357 kb on + strand, within CA264_02905 at 662.357 kb on + strand, within CA264_02905 at 662.444 kb on + strand, within CA264_02905 at 662.648 kb on + strand, within CA264_02905 at 662.694 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.735 kb on - strand, within CA264_02905 at 662.742 kb on + strand, within CA264_02905 at 662.743 kb on - strand, within CA264_02905 at 662.743 kb on - strand, within CA264_02905 at 662.796 kb on + strand at 662.796 kb on + strand at 662.797 kb on - strand at 662.797 kb on - strand at 662.803 kb on - strand at 662.823 kb on - strand at 662.865 kb on - strand at 662.902 kb on + strand at 662.903 kb on - strand at 662.918 kb on + strand at 662.919 kb on - strand at 662.919 kb on - strand at 662.952 kb on + strand at 662.991 kb on + strand, within CA264_02910 at 662.998 kb on + strand, within CA264_02910 at 662.999 kb on - strand, within CA264_02910 at 663.137 kb on - strand, within CA264_02910 at 663.154 kb on - strand, within CA264_02910 at 663.207 kb on + strand, within CA264_02910 at 663.325 kb on - strand at 663.325 kb on - strand at 663.344 kb on + strand at 663.345 kb on - strand at 663.349 kb on - strand at 663.370 kb on + strand at 663.377 kb on + strand at 663.378 kb on - strand at 663.427 kb on + strand at 663.444 kb on - strand at 663.492 kb on - strand, within CA264_02915 at 663.500 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.602 kb on + strand, within CA264_02915 at 663.603 kb on - strand, within CA264_02915 at 663.660 kb on + strand, within CA264_02915 at 663.665 kb on + strand, within CA264_02915 at 663.798 kb on + strand at 663.798 kb on + strand at 663.798 kb on + strand at 663.825 kb on + strand at 663.825 kb on + strand at 663.826 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 661,126 - CA264_02895 0.45 +0.6 661,199 - CA264_02895 0.52 -2.1 661,216 + CA264_02895 0.54 -1.4 661,217 - CA264_02895 0.54 -1.5 661,237 + CA264_02895 0.56 +0.2 661,237 + CA264_02895 0.56 +1.0 661,291 + CA264_02895 0.61 -1.1 661,295 - CA264_02895 0.62 +0.2 661,295 - CA264_02895 0.62 +0.8 661,295 - CA264_02895 0.62 +0.3 661,396 + CA264_02895 0.72 -0.8 661,396 + CA264_02895 0.72 +0.5 661,396 + CA264_02895 0.72 +0.5 661,426 + CA264_02895 0.75 +0.3 661,442 + CA264_02895 0.77 +1.1 661,443 - CA264_02895 0.77 +2.0 661,467 - CA264_02895 0.79 -0.4 661,502 - CA264_02895 0.83 +1.7 661,503 + CA264_02895 0.83 +1.7 661,505 + CA264_02895 0.83 +0.1 661,505 + CA264_02895 0.83 -1.5 661,506 - CA264_02895 0.83 -0.9 661,506 - CA264_02895 0.83 -0.7 661,506 - CA264_02895 0.83 -0.1 661,550 + CA264_02895 0.87 +0.5 661,615 - +1.7 661,615 - -1.4 661,615 - -1.7 661,616 + +1.4 661,617 - +0.4 661,617 - +0.0 661,807 + CA264_02900 0.44 +0.1 661,808 - CA264_02900 0.44 +0.4 661,808 - CA264_02900 0.44 -0.4 661,874 + CA264_02900 0.73 -0.4 661,875 - CA264_02900 0.74 +0.2 661,916 - +0.1 661,918 - -0.9 661,943 - +0.3 661,944 + -0.3 661,975 + -0.8 662,002 + -1.0 662,002 + +0.3 662,002 + -1.2 662,003 - +0.7 662,019 - +2.5 662,085 + -0.7 662,085 + +0.3 662,086 - -0.3 662,086 - +1.0 662,086 - -0.6 662,087 + +1.1 662,087 + +1.0 662,087 + -0.8 662,087 + -0.2 662,088 - +0.2 662,088 - -0.7 662,093 + +0.1 662,094 - +1.4 662,196 + CA264_02905 0.21 +0.7 662,197 - CA264_02905 0.21 -0.5 662,197 - CA264_02905 0.21 -0.0 662,197 - CA264_02905 0.21 -0.6 662,236 + CA264_02905 0.26 -0.8 662,241 + CA264_02905 0.27 +2.0 662,242 - CA264_02905 0.27 +0.3 662,355 + CA264_02905 0.41 -0.1 662,356 - CA264_02905 0.41 -1.6 662,356 - CA264_02905 0.41 -1.4 662,357 + CA264_02905 0.41 -0.2 662,357 + CA264_02905 0.41 +1.5 662,444 + CA264_02905 0.52 -0.7 662,648 + CA264_02905 0.77 +1.4 662,694 - CA264_02905 0.83 -1.1 662,701 - CA264_02905 0.84 +0.3 662,701 - CA264_02905 0.84 -0.0 662,701 - CA264_02905 0.84 +0.8 662,732 + CA264_02905 0.88 +0.2 662,732 + CA264_02905 0.88 +1.2 662,732 + CA264_02905 0.88 -0.9 662,732 + CA264_02905 0.88 -1.2 662,733 - CA264_02905 0.88 -0.7 662,733 - CA264_02905 0.88 +0.8 662,733 - CA264_02905 0.88 -1.7 662,733 - CA264_02905 0.88 +0.2 662,735 - CA264_02905 0.88 +0.3 662,742 + CA264_02905 0.89 -0.2 662,743 - CA264_02905 0.89 -1.0 662,743 - CA264_02905 0.89 +2.6 662,796 + +0.0 662,796 + +1.2 662,797 - +0.5 662,797 - -0.5 662,803 - +0.6 662,823 - -0.7 662,865 - -0.3 662,902 + +0.7 662,903 - -0.4 662,918 + -0.4 662,919 - -0.8 662,919 - +1.3 662,952 + +2.4 662,991 + CA264_02910 0.15 +3.2 662,998 + CA264_02910 0.17 +2.7 662,999 - CA264_02910 0.17 -1.0 663,137 - CA264_02910 0.54 -0.6 663,154 - CA264_02910 0.59 +0.1 663,207 + CA264_02910 0.73 -0.9 663,325 - +1.4 663,325 - +0.6 663,344 + -1.0 663,345 - -0.2 663,349 - -2.3 663,370 + +0.4 663,377 + -0.9 663,378 - +1.4 663,427 + -0.8 663,444 - -0.5 663,492 - CA264_02915 0.14 -0.4 663,500 + CA264_02915 0.16 +0.0 663,548 + CA264_02915 0.29 -0.3 663,548 + CA264_02915 0.29 -1.6 663,548 + CA264_02915 0.29 +0.8 663,602 + CA264_02915 0.43 -0.3 663,603 - CA264_02915 0.43 -1.3 663,660 + CA264_02915 0.58 -1.0 663,665 + CA264_02915 0.59 -1.6 663,798 + +0.9 663,798 + -3.2 663,798 + +1.0 663,825 + +0.3 663,825 + -0.7 663,826 - -0.5 663,828 - +0.9 663,828 - -0.7 663,828 - -1.4 663,828 - +0.7
Or see this region's nucleotide sequence