Experiment: m.b. Cisplatin 0.035 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01520 and CA264_01525 are separated by 372 nucleotides CA264_01525 and CA264_01530 are separated by 85 nucleotides
CA264_01520: CA264_01520 - adenylosuccinate lyase, at 358,894 to 360,246
_01520
CA264_01525: CA264_01525 - penicillin-binding protein, at 360,619 to 362,601
_01525
CA264_01530: CA264_01530 - hypothetical protein, at 362,687 to 363,730
_01530
Position (kb) 360
361
362
363 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 360.249 kb on + strand at 360.277 kb on + strand at 360.295 kb on + strand at 360.295 kb on + strand at 360.380 kb on + strand at 360.412 kb on - strand at 360.430 kb on + strand at 360.459 kb on + strand at 360.459 kb on + strand at 360.460 kb on - strand at 360.464 kb on + strand at 360.464 kb on + strand at 360.465 kb on - strand at 360.465 kb on - strand at 360.465 kb on - strand at 360.467 kb on - strand at 360.467 kb on - strand at 360.467 kb on - strand at 360.484 kb on + strand at 360.485 kb on - strand at 360.485 kb on - strand at 360.494 kb on - strand at 360.494 kb on - strand at 360.496 kb on - strand at 360.496 kb on - strand at 360.497 kb on + strand at 360.497 kb on + strand at 360.497 kb on + strand at 360.498 kb on - strand at 360.500 kb on + strand at 360.501 kb on - strand at 360.507 kb on + strand at 360.527 kb on + strand at 360.527 kb on + strand at 360.527 kb on + strand at 360.527 kb on + strand at 360.528 kb on - strand at 360.528 kb on - strand at 360.530 kb on - strand at 360.534 kb on + strand at 360.534 kb on + strand at 360.534 kb on + strand at 360.534 kb on + strand at 360.534 kb on + strand at 360.535 kb on - strand at 360.536 kb on + strand at 360.537 kb on - strand at 360.552 kb on - strand at 360.566 kb on + strand at 360.566 kb on + strand at 360.570 kb on + strand at 360.580 kb on - strand at 360.586 kb on + strand at 360.587 kb on - strand at 360.601 kb on + strand at 360.603 kb on + strand at 360.690 kb on + strand at 360.690 kb on + strand at 360.691 kb on - strand at 360.691 kb on - strand at 360.715 kb on + strand at 360.715 kb on + strand at 360.716 kb on - strand at 360.717 kb on + strand at 360.717 kb on + strand at 360.717 kb on + strand at 360.718 kb on - strand at 360.729 kb on + strand at 360.754 kb on + strand at 360.869 kb on + strand, within CA264_01525 at 360.869 kb on + strand, within CA264_01525 at 360.870 kb on - strand, within CA264_01525 at 360.870 kb on - strand, within CA264_01525 at 360.870 kb on - strand, within CA264_01525 at 360.870 kb on - strand, within CA264_01525 at 360.870 kb on - strand, within CA264_01525 at 360.871 kb on + strand, within CA264_01525 at 361.129 kb on + strand, within CA264_01525 at 361.205 kb on + strand, within CA264_01525 at 361.207 kb on + strand, within CA264_01525 at 361.292 kb on - strand, within CA264_01525 at 361.324 kb on + strand, within CA264_01525 at 361.324 kb on + strand, within CA264_01525 at 361.325 kb on - strand, within CA264_01525 at 361.329 kb on - strand, within CA264_01525 at 361.329 kb on - strand, within CA264_01525 at 361.329 kb on - strand, within CA264_01525 at 361.329 kb on - strand, within CA264_01525 at 361.329 kb on - strand, within CA264_01525 at 361.405 kb on - strand, within CA264_01525 at 361.416 kb on - strand, within CA264_01525 at 361.511 kb on + strand, within CA264_01525 at 361.531 kb on + strand, within CA264_01525 at 361.531 kb on + strand, within CA264_01525 at 361.531 kb on + strand, within CA264_01525 at 361.532 kb on - strand, within CA264_01525 at 361.586 kb on - strand, within CA264_01525 at 361.595 kb on - strand, within CA264_01525 at 361.595 kb on - strand, within CA264_01525 at 361.620 kb on - strand, within CA264_01525 at 361.748 kb on + strand, within CA264_01525 at 361.749 kb on - strand, within CA264_01525 at 361.749 kb on - strand, within CA264_01525 at 361.838 kb on + strand, within CA264_01525 at 361.839 kb on - strand, within CA264_01525 at 361.873 kb on + strand, within CA264_01525 at 361.873 kb on + strand, within CA264_01525 at 361.969 kb on - strand, within CA264_01525 at 361.997 kb on - strand, within CA264_01525 at 362.189 kb on + strand, within CA264_01525 at 362.190 kb on - strand, within CA264_01525 at 362.190 kb on - strand, within CA264_01525 at 362.190 kb on - strand, within CA264_01525 at 362.218 kb on + strand, within CA264_01525 at 362.218 kb on + strand, within CA264_01525 at 362.219 kb on - strand, within CA264_01525 at 362.230 kb on - strand, within CA264_01525 at 362.230 kb on - strand, within CA264_01525 at 362.395 kb on + strand, within CA264_01525 at 362.395 kb on + strand, within CA264_01525 at 362.396 kb on - strand, within CA264_01525 at 362.396 kb on - strand, within CA264_01525 at 362.628 kb on + strand at 362.629 kb on - strand at 362.676 kb on + strand at 362.676 kb on + strand at 362.706 kb on + strand at 362.794 kb on + strand, within CA264_01530 at 362.795 kb on - strand, within CA264_01530 at 362.871 kb on - strand, within CA264_01530 at 362.871 kb on - strand, within CA264_01530 at 362.885 kb on - strand, within CA264_01530 at 362.897 kb on + strand, within CA264_01530 at 362.898 kb on - strand, within CA264_01530 at 362.937 kb on + strand, within CA264_01530 at 363.172 kb on + strand, within CA264_01530 at 363.218 kb on - strand, within CA264_01530 at 363.218 kb on - strand, within CA264_01530 at 363.218 kb on - strand, within CA264_01530 at 363.232 kb on + strand, within CA264_01530 at 363.232 kb on + strand, within CA264_01530 at 363.233 kb on - strand, within CA264_01530 at 363.362 kb on - strand, within CA264_01530 at 363.383 kb on - strand, within CA264_01530 at 363.425 kb on + strand, within CA264_01530 at 363.445 kb on + strand, within CA264_01530 at 363.445 kb on + strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.447 kb on + strand, within CA264_01530 at 363.447 kb on + strand, within CA264_01530 at 363.448 kb on - strand, within CA264_01530 at 363.472 kb on - strand, within CA264_01530 at 363.485 kb on + strand, within CA264_01530 at 363.494 kb on - strand, within CA264_01530 at 363.497 kb on + strand, within CA264_01530 at 363.498 kb on - strand, within CA264_01530
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml remove 360,249 + -1.7 360,277 + -0.9 360,295 + -1.7 360,295 + -0.2 360,380 + -0.3 360,412 - +0.0 360,430 + -1.3 360,459 + +0.7 360,459 + -0.0 360,460 - -0.7 360,464 + -1.7 360,464 + -0.4 360,465 - -1.9 360,465 - -0.6 360,465 - -0.4 360,467 - +0.1 360,467 - +1.9 360,467 - -0.5 360,484 + +0.2 360,485 - +1.1 360,485 - -0.5 360,494 - +3.2 360,494 - +2.1 360,496 - +2.1 360,496 - +0.8 360,497 + -0.3 360,497 + -0.6 360,497 + -1.7 360,498 - -1.8 360,500 + -0.8 360,501 - -0.6 360,507 + -0.5 360,527 + -0.7 360,527 + +0.5 360,527 + +0.6 360,527 + +0.0 360,528 - -1.3 360,528 - +1.5 360,530 - +0.4 360,534 + -2.0 360,534 + -0.2 360,534 + -0.2 360,534 + +1.7 360,534 + +2.5 360,535 - +0.3 360,536 + -0.0 360,537 - -0.7 360,552 - -3.0 360,566 + -1.0 360,566 + -0.6 360,570 + -0.4 360,580 - -0.2 360,586 + -0.4 360,587 - -1.3 360,601 + +0.2 360,603 + -2.0 360,690 + -0.5 360,690 + +0.1 360,691 - +1.1 360,691 - +0.5 360,715 + -0.4 360,715 + -1.5 360,716 - +0.5 360,717 + -1.6 360,717 + -0.6 360,717 + -0.4 360,718 - -0.2 360,729 + +0.4 360,754 + +1.1 360,869 + CA264_01525 0.13 -0.4 360,869 + CA264_01525 0.13 -0.2 360,870 - CA264_01525 0.13 +0.5 360,870 - CA264_01525 0.13 -1.0 360,870 - CA264_01525 0.13 -0.8 360,870 - CA264_01525 0.13 -0.5 360,870 - CA264_01525 0.13 -1.5 360,871 + CA264_01525 0.13 +0.6 361,129 + CA264_01525 0.26 +3.3 361,205 + CA264_01525 0.30 +0.6 361,207 + CA264_01525 0.30 -2.3 361,292 - CA264_01525 0.34 +0.5 361,324 + CA264_01525 0.36 +0.1 361,324 + CA264_01525 0.36 +1.1 361,325 - CA264_01525 0.36 +0.1 361,329 - CA264_01525 0.36 +0.4 361,329 - CA264_01525 0.36 -1.0 361,329 - CA264_01525 0.36 +0.8 361,329 - CA264_01525 0.36 -0.8 361,329 - CA264_01525 0.36 +0.3 361,405 - CA264_01525 0.40 +2.2 361,416 - CA264_01525 0.40 +0.9 361,511 + CA264_01525 0.45 -0.5 361,531 + CA264_01525 0.46 -1.7 361,531 + CA264_01525 0.46 -0.2 361,531 + CA264_01525 0.46 +2.7 361,532 - CA264_01525 0.46 +1.4 361,586 - CA264_01525 0.49 +0.1 361,595 - CA264_01525 0.49 +0.4 361,595 - CA264_01525 0.49 -1.4 361,620 - CA264_01525 0.50 -0.0 361,748 + CA264_01525 0.57 -1.2 361,749 - CA264_01525 0.57 -1.5 361,749 - CA264_01525 0.57 -0.6 361,838 + CA264_01525 0.61 +0.4 361,839 - CA264_01525 0.62 +0.7 361,873 + CA264_01525 0.63 -0.1 361,873 + CA264_01525 0.63 -0.5 361,969 - CA264_01525 0.68 +1.4 361,997 - CA264_01525 0.69 -0.6 362,189 + CA264_01525 0.79 +0.7 362,190 - CA264_01525 0.79 -1.4 362,190 - CA264_01525 0.79 +0.1 362,190 - CA264_01525 0.79 +7.5 362,218 + CA264_01525 0.81 -0.2 362,218 + CA264_01525 0.81 -0.4 362,219 - CA264_01525 0.81 -1.3 362,230 - CA264_01525 0.81 +0.9 362,230 - CA264_01525 0.81 +0.8 362,395 + CA264_01525 0.90 -1.4 362,395 + CA264_01525 0.90 +0.2 362,396 - CA264_01525 0.90 +0.4 362,396 - CA264_01525 0.90 -0.8 362,628 + -0.3 362,629 - +2.9 362,676 + -0.1 362,676 + -0.1 362,706 + -0.2 362,794 + CA264_01530 0.10 -0.4 362,795 - CA264_01530 0.10 +0.6 362,871 - CA264_01530 0.18 +1.1 362,871 - CA264_01530 0.18 -0.8 362,885 - CA264_01530 0.19 +0.1 362,897 + CA264_01530 0.20 -1.3 362,898 - CA264_01530 0.20 +1.1 362,937 + CA264_01530 0.24 -0.8 363,172 + CA264_01530 0.46 +0.9 363,218 - CA264_01530 0.51 -0.8 363,218 - CA264_01530 0.51 -0.9 363,218 - CA264_01530 0.51 -1.2 363,232 + CA264_01530 0.52 +0.4 363,232 + CA264_01530 0.52 -0.1 363,233 - CA264_01530 0.52 -0.1 363,362 - CA264_01530 0.65 +0.4 363,383 - CA264_01530 0.67 -0.2 363,425 + CA264_01530 0.71 +3.3 363,445 + CA264_01530 0.73 +0.0 363,445 + CA264_01530 0.73 -1.2 363,446 - CA264_01530 0.73 -1.0 363,446 - CA264_01530 0.73 +3.4 363,446 - CA264_01530 0.73 +1.4 363,447 + CA264_01530 0.73 -2.0 363,447 + CA264_01530 0.73 +0.0 363,448 - CA264_01530 0.73 +0.6 363,472 - CA264_01530 0.75 -0.3 363,485 + CA264_01530 0.76 +0.5 363,494 - CA264_01530 0.77 +1.4 363,497 + CA264_01530 0.78 -0.4 363,498 - CA264_01530 0.78 +0.4
Or see this region's nucleotide sequence