Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00750

Experiment: m.b. Cisplatin 0.035 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00740 and CA264_00745 overlap by 1 nucleotidesCA264_00745 and CA264_00750 are separated by 122 nucleotidesCA264_00750 and CA264_00755 are separated by 291 nucleotides CA264_00740: CA264_00740 - beta-ketoacyl-[acyl-carrier-protein] synthase II, at 158,895 to 160,148 _00740 CA264_00745: CA264_00745 - ribonuclease III, at 160,148 to 160,888 _00745 CA264_00750: CA264_00750 - hypothetical protein, at 161,011 to 161,379 _00750 CA264_00755: CA264_00755 - SAM-dependent methyltransferase, at 161,671 to 162,927 _00755 Position (kb) 161 162Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 160.147 kb on - strandat 160.191 kb on + strandat 160.192 kb on - strandat 160.209 kb on + strandat 160.209 kb on + strandat 160.210 kb on - strandat 160.212 kb on + strandat 160.212 kb on + strandat 160.212 kb on + strandat 160.216 kb on - strandat 160.216 kb on - strandat 160.234 kb on + strand, within CA264_00745at 160.235 kb on - strand, within CA264_00745at 160.252 kb on + strand, within CA264_00745at 160.374 kb on + strand, within CA264_00745at 160.500 kb on + strand, within CA264_00745at 160.501 kb on - strand, within CA264_00745at 160.510 kb on + strand, within CA264_00745at 160.511 kb on - strand, within CA264_00745at 160.576 kb on + strand, within CA264_00745at 160.650 kb on + strand, within CA264_00745at 160.651 kb on - strand, within CA264_00745at 160.660 kb on - strand, within CA264_00745at 160.667 kb on - strand, within CA264_00745at 160.748 kb on - strand, within CA264_00745at 160.786 kb on - strand, within CA264_00745at 160.787 kb on + strand, within CA264_00745at 160.787 kb on + strand, within CA264_00745at 160.788 kb on - strand, within CA264_00745at 160.818 kb on + strandat 160.818 kb on + strandat 160.882 kb on + strandat 160.883 kb on - strandat 160.898 kb on + strandat 160.911 kb on - strandat 160.934 kb on - strandat 160.987 kb on + strandat 160.999 kb on + strandat 160.999 kb on + strandat 161.000 kb on - strandat 161.003 kb on + strandat 161.041 kb on + strandat 161.043 kb on + strandat 161.067 kb on - strand, within CA264_00750at 161.067 kb on - strand, within CA264_00750at 161.067 kb on - strand, within CA264_00750at 161.076 kb on - strand, within CA264_00750at 161.109 kb on - strand, within CA264_00750at 161.147 kb on + strand, within CA264_00750at 161.179 kb on + strand, within CA264_00750at 161.244 kb on + strand, within CA264_00750at 161.246 kb on + strand, within CA264_00750at 161.246 kb on + strand, within CA264_00750at 161.246 kb on + strand, within CA264_00750at 161.247 kb on - strand, within CA264_00750at 161.247 kb on - strand, within CA264_00750at 161.247 kb on - strand, within CA264_00750at 161.250 kb on + strand, within CA264_00750at 161.250 kb on + strand, within CA264_00750at 161.251 kb on - strand, within CA264_00750at 161.251 kb on - strand, within CA264_00750at 161.253 kb on - strand, within CA264_00750at 161.253 kb on - strand, within CA264_00750at 161.303 kb on + strand, within CA264_00750at 161.303 kb on + strand, within CA264_00750at 161.303 kb on + strand, within CA264_00750at 161.304 kb on - strand, within CA264_00750at 161.304 kb on - strand, within CA264_00750at 161.313 kb on - strand, within CA264_00750at 161.333 kb on - strand, within CA264_00750at 161.347 kb on - strandat 161.347 kb on - strandat 161.507 kb on + strandat 161.508 kb on - strandat 161.553 kb on + strandat 161.597 kb on + strandat 161.597 kb on + strandat 161.598 kb on - strandat 161.622 kb on - strandat 161.648 kb on - strandat 161.670 kb on + strandat 161.671 kb on - strandat 161.750 kb on + strandat 161.755 kb on + strandat 161.755 kb on + strandat 161.756 kb on - strandat 161.812 kb on - strand, within CA264_00755at 161.831 kb on + strand, within CA264_00755at 161.840 kb on - strand, within CA264_00755at 161.862 kb on + strand, within CA264_00755at 161.872 kb on + strand, within CA264_00755at 161.872 kb on + strand, within CA264_00755at 161.872 kb on + strand, within CA264_00755at 161.873 kb on - strand, within CA264_00755at 161.873 kb on - strand, within CA264_00755at 161.873 kb on - strand, within CA264_00755at 161.878 kb on + strand, within CA264_00755at 161.935 kb on - strand, within CA264_00755at 161.954 kb on - strand, within CA264_00755at 162.093 kb on + strand, within CA264_00755at 162.135 kb on - strand, within CA264_00755at 162.135 kb on - strand, within CA264_00755at 162.135 kb on - strand, within CA264_00755at 162.138 kb on + strand, within CA264_00755at 162.138 kb on + strand, within CA264_00755at 162.139 kb on - strand, within CA264_00755at 162.140 kb on + strand, within CA264_00755at 162.285 kb on - strand, within CA264_00755at 162.310 kb on + strand, within CA264_00755at 162.310 kb on + strand, within CA264_00755at 162.310 kb on + strand, within CA264_00755at 162.311 kb on - strand, within CA264_00755at 162.311 kb on - strand, within CA264_00755at 162.328 kb on + strand, within CA264_00755at 162.329 kb on - strand, within CA264_00755at 162.348 kb on + strand, within CA264_00755

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.035 mg/ml
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160,147 - +1.1
160,191 + -0.2
160,192 - +3.2
160,209 + +2.3
160,209 + +1.0
160,210 - -0.5
160,212 + +0.8
160,212 + -0.8
160,212 + -0.8
160,216 - -2.1
160,216 - +1.9
160,234 + CA264_00745 0.12 +0.6
160,235 - CA264_00745 0.12 +1.0
160,252 + CA264_00745 0.14 -0.2
160,374 + CA264_00745 0.30 +5.3
160,500 + CA264_00745 0.48 -0.8
160,501 - CA264_00745 0.48 +0.1
160,510 + CA264_00745 0.49 -0.9
160,511 - CA264_00745 0.49 +2.1
160,576 + CA264_00745 0.58 +3.9
160,650 + CA264_00745 0.68 -1.3
160,651 - CA264_00745 0.68 +1.1
160,660 - CA264_00745 0.69 -0.5
160,667 - CA264_00745 0.70 -0.0
160,748 - CA264_00745 0.81 +0.9
160,786 - CA264_00745 0.86 +3.3
160,787 + CA264_00745 0.86 +0.1
160,787 + CA264_00745 0.86 +1.5
160,788 - CA264_00745 0.86 -2.3
160,818 + -2.2
160,818 + -1.6
160,882 + -2.0
160,883 - +0.9
160,898 + +0.5
160,911 - -0.1
160,934 - -0.1
160,987 + -0.9
160,999 + -0.8
160,999 + -0.6
161,000 - +0.4
161,003 + -0.5
161,041 + -0.9
161,043 + -0.7
161,067 - CA264_00750 0.15 +0.9
161,067 - CA264_00750 0.15 +0.3
161,067 - CA264_00750 0.15 -0.5
161,076 - CA264_00750 0.18 -0.2
161,109 - CA264_00750 0.27 -0.3
161,147 + CA264_00750 0.37 +1.2
161,179 + CA264_00750 0.46 -0.7
161,244 + CA264_00750 0.63 -2.0
161,246 + CA264_00750 0.64 -0.1
161,246 + CA264_00750 0.64 -0.6
161,246 + CA264_00750 0.64 -0.7
161,247 - CA264_00750 0.64 +1.6
161,247 - CA264_00750 0.64 +1.1
161,247 - CA264_00750 0.64 -1.6
161,250 + CA264_00750 0.65 +0.7
161,250 + CA264_00750 0.65 +1.2
161,251 - CA264_00750 0.65 -0.3
161,251 - CA264_00750 0.65 +0.7
161,253 - CA264_00750 0.66 -0.7
161,253 - CA264_00750 0.66 +0.5
161,303 + CA264_00750 0.79 -1.4
161,303 + CA264_00750 0.79 -1.0
161,303 + CA264_00750 0.79 -1.2
161,304 - CA264_00750 0.79 -0.2
161,304 - CA264_00750 0.79 +0.3
161,313 - CA264_00750 0.82 -0.6
161,333 - CA264_00750 0.87 +0.5
161,347 - -0.3
161,347 - +0.8
161,507 + -0.6
161,508 - -1.0
161,553 + +0.8
161,597 + -1.1
161,597 + +0.6
161,598 - -0.4
161,622 - +0.5
161,648 - -0.1
161,670 + +0.3
161,671 - -1.4
161,750 + -0.2
161,755 + +0.6
161,755 + +0.1
161,756 - -1.2
161,812 - CA264_00755 0.11 -2.6
161,831 + CA264_00755 0.13 +0.3
161,840 - CA264_00755 0.13 -1.4
161,862 + CA264_00755 0.15 -0.3
161,872 + CA264_00755 0.16 -1.0
161,872 + CA264_00755 0.16 -2.2
161,872 + CA264_00755 0.16 +0.1
161,873 - CA264_00755 0.16 +0.3
161,873 - CA264_00755 0.16 -1.6
161,873 - CA264_00755 0.16 +0.3
161,878 + CA264_00755 0.16 -0.1
161,935 - CA264_00755 0.21 +0.1
161,954 - CA264_00755 0.23 -0.8
162,093 + CA264_00755 0.34 +0.5
162,135 - CA264_00755 0.37 -0.0
162,135 - CA264_00755 0.37 +0.8
162,135 - CA264_00755 0.37 -1.2
162,138 + CA264_00755 0.37 -0.5
162,138 + CA264_00755 0.37 +0.0
162,139 - CA264_00755 0.37 -0.7
162,140 + CA264_00755 0.37 +0.1
162,285 - CA264_00755 0.49 -2.0
162,310 + CA264_00755 0.51 +3.9
162,310 + CA264_00755 0.51 -1.2
162,310 + CA264_00755 0.51 +1.4
162,311 - CA264_00755 0.51 +1.2
162,311 - CA264_00755 0.51 +1.3
162,328 + CA264_00755 0.52 -0.2
162,329 - CA264_00755 0.52 -0.6
162,348 + CA264_00755 0.54 +0.5

Or see this region's nucleotide sequence