Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS17465

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,491,084	-				+0.2
3,491,084	-				-2.3
3,491,114	+				-1.6
3,491,122	+				-0.4
3,491,128	+				-0.3
3,491,128	+				+1.7
3,491,128	+				+0.1
3,491,129	-				-2.7
3,491,152	+				-2.2
3,491,152	+				-0.6
3,491,152	+				+1.1
3,491,153	-		ABIE40_RS17460	0.10	+0.5
3,491,153	-		ABIE40_RS17460	0.10	-2.9
3,491,153	-		ABIE40_RS17460	0.10	-0.3
3,491,207	-		ABIE40_RS17460	0.20	+0.8
3,491,440	+		ABIE40_RS17460	0.61	-0.4
3,491,440	+		ABIE40_RS17460	0.61	+0.7
3,491,440	+		ABIE40_RS17460	0.61	+2.7
3,491,440	+		ABIE40_RS17460	0.61	+1.0
3,491,441	-		ABIE40_RS17460	0.62	-1.4
3,491,441	-		ABIE40_RS17460	0.62	-2.2
3,491,519	+		ABIE40_RS17460	0.76	+0.5
3,491,520	-		ABIE40_RS17460	0.76	-0.3
3,491,520	-		ABIE40_RS17460	0.76	+0.7
3,491,581	+		ABIE40_RS17460	0.87	-0.3
3,491,582	-		ABIE40_RS17460	0.87	-0.8
3,491,585	-		ABIE40_RS17460	0.87	+0.3
3,491,585	-		ABIE40_RS17460	0.87	-0.4
3,491,690	-				+2.1
3,491,690	-				+0.5
3,491,690	-				+1.3
3,491,692	-				-1.0
3,491,692	-				-0.3
3,491,692	-				+0.5
3,491,694	+				-0.3
3,491,695	-				+1.2
3,491,806	+				-0.5
3,491,806	+				+1.2
3,491,806	+				-0.5
3,491,806	+				-1.1
3,491,807	-				+0.7
3,491,807	-				+2.7
3,491,807	-				+1.4
3,491,807	-				+1.0
3,491,809	+				-0.5
3,491,809	+				-0.8
3,491,809	+				-1.1
3,491,809	+				-0.5
3,491,809	+				-0.5
3,491,810	-				-0.0
3,491,810	-				+0.5
3,491,810	-				+0.6
3,491,983	+		ABIE40_RS17465	0.32	-1.0
3,491,983	+		ABIE40_RS17465	0.32	-1.0
3,491,983	+		ABIE40_RS17465	0.32	+1.5
3,491,984	-		ABIE40_RS17465	0.32	+1.3
3,491,984	-		ABIE40_RS17465	0.32	+0.1
3,491,984	-		ABIE40_RS17465	0.32	+1.7
3,491,984	-		ABIE40_RS17465	0.32	-2.2
3,491,984	-		ABIE40_RS17465	0.32	-1.3
3,491,984	-		ABIE40_RS17465	0.32	+0.3
3,492,175	+		ABIE40_RS17465	0.60	-0.5
3,492,175	+		ABIE40_RS17465	0.60	+0.5
3,492,175	+		ABIE40_RS17465	0.60	-3.1
3,492,175	+		ABIE40_RS17465	0.60	-0.9
3,492,175	+		ABIE40_RS17465	0.60	-0.6
3,492,175	+		ABIE40_RS17465	0.60	-1.3
3,492,175	+		ABIE40_RS17465	0.60	-0.5
3,492,175	+		ABIE40_RS17465	0.60	-1.8
3,492,175	+		ABIE40_RS17465	0.60	-0.5
3,492,176	-		ABIE40_RS17465	0.60	-0.5
3,492,176	-		ABIE40_RS17465	0.60	-0.7
3,492,176	-		ABIE40_RS17465	0.60	+2.0
3,492,176	-		ABIE40_RS17465	0.60	-0.2
3,492,176	-		ABIE40_RS17465	0.60	+2.1
3,492,176	-		ABIE40_RS17465	0.60	-0.9
3,492,176	-		ABIE40_RS17465	0.60	-0.4
3,492,176	-		ABIE40_RS17465	0.60	-1.7
3,492,176	-		ABIE40_RS17465	0.60	-0.2
3,492,176	-		ABIE40_RS17465	0.60	+0.2
3,492,176	-		ABIE40_RS17465	0.60	+1.1
3,492,266	+		ABIE40_RS17465	0.73	-0.1
3,492,267	-		ABIE40_RS17465	0.73	-0.1
3,492,267	-		ABIE40_RS17465	0.73	-1.3
3,492,267	-		ABIE40_RS17465	0.73	+2.1
3,492,267	-		ABIE40_RS17465	0.73	-2.9
3,492,267	-		ABIE40_RS17465	0.73	-1.1
3,492,640	+		ABIE40_RS17470	0.21	+0.6
3,492,640	+		ABIE40_RS17470	0.21	+0.6
3,492,641	-		ABIE40_RS17470	0.22	+0.3
3,492,648	+		ABIE40_RS17470	0.22	-0.5
3,492,648	+		ABIE40_RS17470	0.22	-1.7
3,492,648	+		ABIE40_RS17470	0.22	-2.0
3,492,649	-		ABIE40_RS17470	0.22	+1.5
3,492,649	-		ABIE40_RS17470	0.22	-1.3
3,492,649	-		ABIE40_RS17470	0.22	-0.1
3,492,712	+		ABIE40_RS17470	0.30	-0.4
3,492,712	+		ABIE40_RS17470	0.30	+2.4
3,492,796	-		ABIE40_RS17470	0.39	-2.5
3,492,853	+		ABIE40_RS17470	0.46	-0.7
3,492,853	+		ABIE40_RS17470	0.46	-0.4
3,492,853	+		ABIE40_RS17470	0.46	+0.3
3,492,854	-		ABIE40_RS17470	0.46	+0.3
3,493,040	+		ABIE40_RS17470	0.67	-0.8
3,493,040	+		ABIE40_RS17470	0.67	-1.4
3,493,040	+		ABIE40_RS17470	0.67	+0.3
3,493,040	+		ABIE40_RS17470	0.67	+0.1
3,493,040	+		ABIE40_RS17470	0.67	-0.7
3,493,041	-		ABIE40_RS17470	0.67	-0.5
3,493,041	-		ABIE40_RS17470	0.67	+0.2
3,493,041	-		ABIE40_RS17470	0.67	+0.1
3,493,041	-		ABIE40_RS17470	0.67	+0.2
3,493,041	-		ABIE40_RS17470	0.67	-0.1
3,493,041	-		ABIE40_RS17470	0.67	-0.6
3,493,041	-		ABIE40_RS17470	0.67	-1.2
3,493,041	-		ABIE40_RS17470	0.67	-0.1
3,493,041	-		ABIE40_RS17470	0.67	-1.0
3,493,041	-		ABIE40_RS17470	0.67	-0.3
3,493,041	-		ABIE40_RS17470	0.67	-0.4
3,493,041	-		ABIE40_RS17470	0.67	-0.6
3,493,041	-		ABIE40_RS17470	0.67	-1.0
3,493,041	-		ABIE40_RS17470	0.67	-1.6
3,493,041	-		ABIE40_RS17470	0.67	-1.9
3,493,072	+		ABIE40_RS17470	0.70	-1.6
3,493,072	+		ABIE40_RS17470	0.70	-1.6
3,493,073	-		ABIE40_RS17470	0.71	+1.5
3,493,073	-		ABIE40_RS17470	0.71	+1.1
3,493,073	-		ABIE40_RS17470	0.71	-0.2
3,493,073	-		ABIE40_RS17470	0.71	+0.3
3,493,166	+		ABIE40_RS17470	0.81	-2.1
3,493,166	+		ABIE40_RS17470	0.81	-1.6
3,493,201	+		ABIE40_RS17470	0.85	-1.4
3,493,201	+		ABIE40_RS17470	0.85	-1.3
3,493,201	+		ABIE40_RS17470	0.85	-0.4
3,493,201	+		ABIE40_RS17470	0.85	-1.8
3,493,202	-		ABIE40_RS17470	0.85	+0.5
3,493,202	-		ABIE40_RS17470	0.85	-0.3
3,493,202	-		ABIE40_RS17470	0.85	+0.9
3,493,202	-		ABIE40_RS17470	0.85	+0.2
3,493,443	+		ABIE40_RS17475	0.15	-1.8
3,493,443	+		ABIE40_RS17475	0.15	+0.9
3,493,443	+		ABIE40_RS17475	0.15	+0.4
3,493,444	-		ABIE40_RS17475	0.15	+1.6
3,493,444	-		ABIE40_RS17475	0.15	+0.6
3,493,445	+		ABIE40_RS17475	0.15	+1.3
3,493,445	+		ABIE40_RS17475	0.15	-0.2
3,493,445	+		ABIE40_RS17475	0.15	-1.0
3,493,446	-		ABIE40_RS17475	0.15	+1.6
3,493,446	-		ABIE40_RS17475	0.15	-1.2
3,493,446	-		ABIE40_RS17475	0.15	-1.5
3,493,446	-		ABIE40_RS17475	0.15	-1.6