Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21730 and ABID97_RS21735 are separated by 35 nucleotides ABID97_RS21735 and ABID97_RS21740 are separated by 27 nucleotides ABID97_RS21740 and ABID97_RS21745 overlap by 8 nucleotides
ABID97_RS21730: ABID97_RS21730 - LysR substrate-binding domain-containing protein, at 4,492,245 to 4,493,144
_RS21730
ABID97_RS21735: ABID97_RS21735 - MetQ/NlpA family ABC transporter substrate-binding protein, at 4,493,180 to 4,494,001
_RS21735
ABID97_RS21740: ABID97_RS21740 - methionine ABC transporter permease, at 4,494,029 to 4,494,691
_RS21740
ABID97_RS21745: ABID97_RS21745 - ATP-binding cassette domain-containing protein, at 4,494,684 to 4,495,559
_RS21745
Position (kb)
4493
4494
4495 Strain fitness (log2 ratio)
-2
-1
0
1 at 4492.767 kb on + strand, within ABID97_RS21730 at 4492.971 kb on + strand, within ABID97_RS21730 at 4492.971 kb on + strand, within ABID97_RS21730 at 4492.971 kb on + strand, within ABID97_RS21730 at 4492.971 kb on + strand, within ABID97_RS21730 at 4492.972 kb on - strand, within ABID97_RS21730 at 4492.972 kb on - strand, within ABID97_RS21730 at 4492.972 kb on - strand, within ABID97_RS21730 at 4492.987 kb on - strand, within ABID97_RS21730 at 4493.068 kb on - strand at 4493.181 kb on + strand at 4493.181 kb on + strand at 4493.181 kb on + strand at 4493.182 kb on - strand at 4493.322 kb on + strand, within ABID97_RS21735 at 4493.646 kb on + strand, within ABID97_RS21735 at 4493.647 kb on - strand, within ABID97_RS21735 at 4493.790 kb on + strand, within ABID97_RS21735 at 4493.790 kb on + strand, within ABID97_RS21735 at 4494.142 kb on - strand, within ABID97_RS21740 at 4494.142 kb on - strand, within ABID97_RS21740 at 4494.204 kb on + strand, within ABID97_RS21740 at 4494.205 kb on - strand, within ABID97_RS21740 at 4494.375 kb on + strand, within ABID97_RS21740 at 4494.375 kb on + strand, within ABID97_RS21740 at 4494.376 kb on - strand, within ABID97_RS21740 at 4494.691 kb on + strand at 4494.691 kb on + strand at 4494.692 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 4,492,767 + ABID97_RS21730 0.58 -0.3 4,492,971 + ABID97_RS21730 0.81 -1.6 4,492,971 + ABID97_RS21730 0.81 +0.2 4,492,971 + ABID97_RS21730 0.81 +0.8 4,492,971 + ABID97_RS21730 0.81 +0.1 4,492,972 - ABID97_RS21730 0.81 -0.2 4,492,972 - ABID97_RS21730 0.81 +0.2 4,492,972 - ABID97_RS21730 0.81 +0.5 4,492,987 - ABID97_RS21730 0.82 -0.4 4,493,068 - -0.1 4,493,181 + -0.5 4,493,181 + -0.1 4,493,181 + +0.1 4,493,182 - -0.0 4,493,322 + ABID97_RS21735 0.17 -0.3 4,493,646 + ABID97_RS21735 0.57 -0.4 4,493,647 - ABID97_RS21735 0.57 -1.0 4,493,790 + ABID97_RS21735 0.74 -0.5 4,493,790 + ABID97_RS21735 0.74 -0.1 4,494,142 - ABID97_RS21740 0.17 -0.4 4,494,142 - ABID97_RS21740 0.17 +1.2 4,494,204 + ABID97_RS21740 0.26 -0.2 4,494,205 - ABID97_RS21740 0.27 +0.2 4,494,375 + ABID97_RS21740 0.52 -0.3 4,494,375 + ABID97_RS21740 0.52 +0.4 4,494,376 - ABID97_RS21740 0.52 -2.1 4,494,691 + +0.0 4,494,691 + +0.1 4,494,692 - +0.5
Or see this region's nucleotide sequence