Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS16785 and ABID97_RS16790 overlap by 4 nucleotides ABID97_RS16790 and ABID97_RS16795 overlap by 29 nucleotides ABID97_RS16795 and ABID97_RS16800 overlap by 1 nucleotides
ABID97_RS16785: ABID97_RS16785 - transporter, at 3,470,743 to 3,473,142
_RS16785
ABID97_RS16790: ABID97_RS16790 - LolA-related protein, at 3,473,139 to 3,473,777
_RS16790
ABID97_RS16795: ABID97_RS16795 - acyl-CoA synthetase, at 3,473,749 to 3,474,747
_RS16795
ABID97_RS16800: ABID97_RS16800 - AMP-binding protein, at 3,474,747 to 3,476,456
_RS16800
Position (kb)
3473
3474
3475 Strain fitness (log2 ratio)
-1
0
1
2 at 3473.795 kb on + strand at 3473.796 kb on - strand at 3473.796 kb on - strand at 3473.927 kb on + strand, within ABID97_RS16795 at 3473.927 kb on + strand, within ABID97_RS16795 at 3473.928 kb on - strand, within ABID97_RS16795 at 3473.928 kb on - strand, within ABID97_RS16795 at 3473.945 kb on + strand, within ABID97_RS16795 at 3473.946 kb on - strand, within ABID97_RS16795 at 3473.946 kb on - strand, within ABID97_RS16795 at 3474.248 kb on + strand, within ABID97_RS16795 at 3474.249 kb on - strand, within ABID97_RS16795 at 3474.249 kb on - strand, within ABID97_RS16795 at 3474.434 kb on + strand, within ABID97_RS16795 at 3474.435 kb on - strand, within ABID97_RS16795 at 3474.435 kb on - strand, within ABID97_RS16795 at 3474.524 kb on + strand, within ABID97_RS16795 at 3474.525 kb on - strand, within ABID97_RS16795 at 3474.525 kb on - strand, within ABID97_RS16795 at 3474.570 kb on - strand, within ABID97_RS16795 at 3474.570 kb on - strand, within ABID97_RS16795 at 3474.978 kb on + strand, within ABID97_RS16800 at 3474.978 kb on + strand, within ABID97_RS16800 at 3474.979 kb on - strand, within ABID97_RS16800 at 3474.980 kb on + strand, within ABID97_RS16800 at 3475.337 kb on - strand, within ABID97_RS16800 at 3475.337 kb on - strand, within ABID97_RS16800 at 3475.603 kb on + strand, within ABID97_RS16800 at 3475.603 kb on + strand, within ABID97_RS16800 at 3475.604 kb on - strand, within ABID97_RS16800 at 3475.604 kb on - strand, within ABID97_RS16800 at 3475.604 kb on - strand, within ABID97_RS16800 at 3475.604 kb on - strand, within ABID97_RS16800
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 3,473,795 + +0.2 3,473,796 - +0.0 3,473,796 - +0.1 3,473,927 + ABID97_RS16795 0.18 +0.7 3,473,927 + ABID97_RS16795 0.18 -0.1 3,473,928 - ABID97_RS16795 0.18 -0.0 3,473,928 - ABID97_RS16795 0.18 -0.4 3,473,945 + ABID97_RS16795 0.20 +0.6 3,473,946 - ABID97_RS16795 0.20 -0.0 3,473,946 - ABID97_RS16795 0.20 +0.0 3,474,248 + ABID97_RS16795 0.50 +0.9 3,474,249 - ABID97_RS16795 0.50 -0.4 3,474,249 - ABID97_RS16795 0.50 +0.1 3,474,434 + ABID97_RS16795 0.69 +0.5 3,474,435 - ABID97_RS16795 0.69 +1.1 3,474,435 - ABID97_RS16795 0.69 -0.2 3,474,524 + ABID97_RS16795 0.78 +0.3 3,474,525 - ABID97_RS16795 0.78 +0.2 3,474,525 - ABID97_RS16795 0.78 +0.6 3,474,570 - ABID97_RS16795 0.82 +1.0 3,474,570 - ABID97_RS16795 0.82 +0.5 3,474,978 + ABID97_RS16800 0.14 +1.8 3,474,978 + ABID97_RS16800 0.14 -0.2 3,474,979 - ABID97_RS16800 0.14 -0.8 3,474,980 + ABID97_RS16800 0.14 -0.5 3,475,337 - ABID97_RS16800 0.35 +0.3 3,475,337 - ABID97_RS16800 0.35 -1.0 3,475,603 + ABID97_RS16800 0.50 +0.6 3,475,603 + ABID97_RS16800 0.50 +1.2 3,475,604 - ABID97_RS16800 0.50 -0.0 3,475,604 - ABID97_RS16800 0.50 -1.0 3,475,604 - ABID97_RS16800 0.50 -0.1 3,475,604 - ABID97_RS16800 0.50 -0.1
Or see this region's nucleotide sequence