Strain Fitness in Variovorax sp. OAS795 around ABID97_RS03470

Experiment: L-Glutamic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamic (C)
704,644	+		ABID97_RS03460	0.88	+0.7
704,645	-		ABID97_RS03460	0.88	-0.5
704,804	-				-0.0
704,889	+				-0.6
704,889	+				+1.2
704,889	+				-0.8
704,889	+				-1.6
704,889	+				+0.4
704,889	+				-2.0
704,889	+				-0.7
704,889	+				-0.1
704,890	-				+0.2
704,890	-				-0.3
704,890	-				-0.4
704,890	-				-0.4
704,890	-				+0.2
704,890	-				-1.9
704,890	-				+0.3
705,219	+		ABID97_RS03465	0.78	-0.8
705,219	+		ABID97_RS03465	0.78	-0.1
705,995	+		ABID97_RS03470	0.17	+0.3
705,996	-		ABID97_RS03470	0.17	-1.0
705,996	-		ABID97_RS03470	0.17	-0.4
705,996	-		ABID97_RS03470	0.17	-0.5
705,996	-		ABID97_RS03470	0.17	-2.5
705,996	-		ABID97_RS03470	0.17	-0.8
705,996	-		ABID97_RS03470	0.17	-1.2
705,996	-		ABID97_RS03470	0.17	-1.0
706,028	+		ABID97_RS03470	0.18	-0.6
706,127	+		ABID97_RS03470	0.22	-0.7
706,127	+		ABID97_RS03470	0.22	-1.1
706,127	+		ABID97_RS03470	0.22	-0.4
706,128	-		ABID97_RS03470	0.22	-1.4
706,128	-		ABID97_RS03470	0.22	-1.6
706,128	-		ABID97_RS03470	0.22	-1.2
706,128	-		ABID97_RS03470	0.22	+1.3
706,269	-		ABID97_RS03470	0.27	-1.8
706,328	+		ABID97_RS03470	0.29	-1.0
706,328	+		ABID97_RS03470	0.29	-1.6
706,328	+		ABID97_RS03470	0.29	-0.6
706,328	+		ABID97_RS03470	0.29	-1.1
706,568	+		ABID97_RS03470	0.38	-1.5
706,569	-		ABID97_RS03470	0.38	-1.0
706,736	+		ABID97_RS03470	0.44	-0.8
707,000	+		ABID97_RS03470	0.54	-0.5
707,000	+		ABID97_RS03470	0.54	-0.1
707,000	+		ABID97_RS03470	0.54	-1.3
707,000	+		ABID97_RS03470	0.54	-1.2
707,000	+		ABID97_RS03470	0.54	+0.1
707,000	+		ABID97_RS03470	0.54	-1.5
707,001	-		ABID97_RS03470	0.54	-1.4
707,001	-		ABID97_RS03470	0.54	-1.0
707,001	-		ABID97_RS03470	0.54	-0.4
707,001	-		ABID97_RS03470	0.54	-1.0
707,115	-		ABID97_RS03470	0.58	-1.1
707,115	-		ABID97_RS03470	0.58	-1.1
707,132	+		ABID97_RS03470	0.59	-1.7
707,132	+		ABID97_RS03470	0.59	-1.4
707,132	+		ABID97_RS03470	0.59	-0.3
707,132	+		ABID97_RS03470	0.59	-0.7
707,132	+		ABID97_RS03470	0.59	-2.0
707,132	+		ABID97_RS03470	0.59	-0.5
707,132	+		ABID97_RS03470	0.59	-0.4
707,133	-		ABID97_RS03470	0.59	-1.1
707,133	-		ABID97_RS03470	0.59	-0.9
707,133	-		ABID97_RS03470	0.59	-0.9
707,133	-		ABID97_RS03470	0.59	-0.5
707,198	+		ABID97_RS03470	0.61	-1.1
707,199	-		ABID97_RS03470	0.61	-0.5
707,199	-		ABID97_RS03470	0.61	-1.2
707,321	+		ABID97_RS03470	0.66	-1.2
707,322	-		ABID97_RS03470	0.66	-0.8
707,322	-		ABID97_RS03470	0.66	-1.6
707,393	+		ABID97_RS03470	0.69	-1.4
707,393	+		ABID97_RS03470	0.69	-1.5
707,393	+		ABID97_RS03470	0.69	-1.3
707,393	+		ABID97_RS03470	0.69	-0.9
707,393	+		ABID97_RS03470	0.69	-0.2
707,393	+		ABID97_RS03470	0.69	-0.7
707,394	-		ABID97_RS03470	0.69	-3.4
707,394	-		ABID97_RS03470	0.69	-1.1
707,394	-		ABID97_RS03470	0.69	-1.2
707,492	+		ABID97_RS03470	0.72	-0.6
707,493	-		ABID97_RS03470	0.72	-0.8
707,493	-		ABID97_RS03470	0.72	-0.5
707,493	-		ABID97_RS03470	0.72	-0.6
707,607	-		ABID97_RS03470	0.76	-1.5
707,607	-		ABID97_RS03470	0.76	-1.3
707,607	-		ABID97_RS03470	0.76	-0.8
707,607	-		ABID97_RS03470	0.76	+0.8
707,645	+		ABID97_RS03470	0.78	+0.8
707,750	+		ABID97_RS03470	0.82	-1.3
707,750	+		ABID97_RS03470	0.82	-1.7
707,750	+		ABID97_RS03470	0.82	-0.4
707,750	+		ABID97_RS03470	0.82	-1.7
707,751	-		ABID97_RS03470	0.82	-1.0
707,751	-		ABID97_RS03470	0.82	-0.8
707,751	-		ABID97_RS03470	0.82	-1.3
707,751	-		ABID97_RS03470	0.82	-0.5
707,751	-		ABID97_RS03470	0.82	-0.8
707,751	-		ABID97_RS03470	0.82	-0.9
707,804	+		ABID97_RS03470	0.84	-0.8
707,804	+		ABID97_RS03470	0.84	-2.2
707,804	+		ABID97_RS03470	0.84	+0.4
707,805	-		ABID97_RS03470	0.84	-1.6
707,805	-		ABID97_RS03470	0.84	-1.0
707,805	-		ABID97_RS03470	0.84	-1.3
707,805	-		ABID97_RS03470	0.84	-0.1
707,805	-		ABID97_RS03470	0.84	-0.9
707,805	-		ABID97_RS03470	0.84	-0.9
707,828	+		ABID97_RS03470	0.85	-0.5
707,828	+		ABID97_RS03470	0.85	-0.6
707,828	+		ABID97_RS03470	0.85	-0.9
707,921	+		ABID97_RS03470	0.88	-0.9
707,921	+		ABID97_RS03470	0.88	-1.0
707,921	+		ABID97_RS03470	0.88	-0.6
707,922	-		ABID97_RS03470	0.88	-1.1
708,088	+				-0.6
708,088	+				+0.3
708,088	+				-0.7
708,088	+				-0.5
708,089	-				-0.8
708,120	-				-0.9
708,143	+				-0.4
708,144	-				-0.8
708,287	+				+0.4
708,287	+				-0.5
708,288	-				+0.1
708,288	-				+1.4
708,702	+		ABID97_RS03475	0.22	+1.1
708,702	+		ABID97_RS03475	0.22	+1.4
708,702	+		ABID97_RS03475	0.22	+3.2
708,702	+		ABID97_RS03475	0.22	+1.9
708,702	+		ABID97_RS03475	0.22	+1.9
708,703	-		ABID97_RS03475	0.22	+1.5
708,715	-		ABID97_RS03475	0.23	+0.8
708,784	-		ABID97_RS03475	0.27	+1.2
708,789	+		ABID97_RS03475	0.27	+0.8
708,789	+		ABID97_RS03475	0.27	+0.9
708,789	+		ABID97_RS03475	0.27	+1.1
708,789	+		ABID97_RS03475	0.27	+0.3
708,790	-		ABID97_RS03475	0.27	+1.1
708,790	-		ABID97_RS03475	0.27	+0.5
708,790	-		ABID97_RS03475	0.27	+0.4
708,790	-		ABID97_RS03475	0.27	+0.9
708,790	-		ABID97_RS03475	0.27	+0.5
708,790	-		ABID97_RS03475	0.27	+1.1
708,801	+		ABID97_RS03475	0.28	+0.0
708,802	-		ABID97_RS03475	0.28	+1.1
708,802	-		ABID97_RS03475	0.28	+1.2
708,960	+		ABID97_RS03475	0.37	+0.8
708,976	+		ABID97_RS03475	0.38	+1.3
708,976	+		ABID97_RS03475	0.38	+1.6
708,976	+		ABID97_RS03475	0.38	+2.0
708,976	+		ABID97_RS03475	0.38	+1.7
708,977	-		ABID97_RS03475	0.38	+1.5
709,222	-		ABID97_RS03475	0.51	+1.1
709,228	-		ABID97_RS03475	0.52	+1.0
709,228	-		ABID97_RS03475	0.52	+1.4