Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4201

Experiment: D-Glucosamine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (C)
4,711,887	+		PfGW456L13_4199	0.31	-0.0
4,711,887	+		PfGW456L13_4199	0.31	-0.7
4,711,887	+		PfGW456L13_4199	0.31	+0.8
4,711,887	+		PfGW456L13_4199	0.31	-0.4
4,711,887	+		PfGW456L13_4199	0.31	-1.3
4,711,888	-		PfGW456L13_4199	0.31	-1.1
4,711,888	-		PfGW456L13_4199	0.31	+0.6
4,711,888	-		PfGW456L13_4199	0.31	+0.3
4,711,888	-		PfGW456L13_4199	0.31	+1.0
4,711,888	-		PfGW456L13_4199	0.31	+0.4
4,711,956	+		PfGW456L13_4199	0.37	-0.5
4,711,956	+		PfGW456L13_4199	0.37	+0.9
4,712,046	+		PfGW456L13_4199	0.46	+1.1
4,712,046	+		PfGW456L13_4199	0.46	+0.6
4,712,046	+		PfGW456L13_4199	0.46	-0.4
4,712,046	+		PfGW456L13_4199	0.46	+1.8
4,712,046	+		PfGW456L13_4199	0.46	-0.1
4,712,046	+		PfGW456L13_4199	0.46	+1.6
4,712,046	+		PfGW456L13_4199	0.46	-0.5
4,712,046	+		PfGW456L13_4199	0.46	+0.3
4,712,047	-				+0.6
4,712,047	-		PfGW456L13_4199	0.46	+0.8
4,712,047	-		PfGW456L13_4199	0.46	+0.4
4,712,099	-		PfGW456L13_4199	0.51	-0.6
4,712,099	-		PfGW456L13_4199	0.51	-1.2
4,712,271	+		PfGW456L13_4199	0.67	-0.6
4,712,271	+		PfGW456L13_4199	0.67	+0.4
4,712,271	+		PfGW456L13_4199	0.67	-1.0
4,712,271	+		PfGW456L13_4199	0.67	+0.6
4,712,272	-		PfGW456L13_4199	0.67	+0.3
4,712,272	-		PfGW456L13_4199	0.67	-0.8
4,712,272	-		PfGW456L13_4199	0.67	+0.3
4,712,272	-		PfGW456L13_4199	0.67	-0.3
4,712,272	-		PfGW456L13_4199	0.67	+1.4
4,712,301	+		PfGW456L13_4199	0.70	-0.7
4,712,301	+		PfGW456L13_4199	0.70	-0.4
4,712,301	+		PfGW456L13_4199	0.70	+0.1
4,712,301	+		PfGW456L13_4199	0.70	-0.5
4,712,301	+		PfGW456L13_4199	0.70	-1.4
4,712,301	+		PfGW456L13_4199	0.70	-0.9
4,712,301	+		PfGW456L13_4199	0.70	+1.1
4,712,302	-		PfGW456L13_4199	0.70	-0.3
4,712,302	-		PfGW456L13_4199	0.70	+0.9
4,712,302	-		PfGW456L13_4199	0.70	+1.1
4,712,302	-		PfGW456L13_4199	0.70	-0.3
4,712,302	-		PfGW456L13_4199	0.70	+1.1
4,712,364	+				+1.1
4,712,403	+		PfGW456L13_4199	0.79	+0.1
4,712,403	+		PfGW456L13_4199	0.79	-0.4
4,712,403	+		PfGW456L13_4199	0.79	+0.6
4,712,403	+		PfGW456L13_4199	0.79	+1.0
4,712,404	-		PfGW456L13_4199	0.80	-0.2
4,712,404	-		PfGW456L13_4199	0.80	+0.9
4,712,404	-		PfGW456L13_4199	0.80	+1.1
4,712,404	-		PfGW456L13_4199	0.80	+1.3
4,712,404	-		PfGW456L13_4199	0.80	+0.7
4,712,404	-		PfGW456L13_4199	0.80	-0.6
4,712,404	-		PfGW456L13_4199	0.80	-0.8
4,712,404	-		PfGW456L13_4199	0.80	-0.1
4,712,520	+				-0.5
4,712,520	+				+0.6
4,712,521	-				-0.6
4,712,521	-				+0.1
4,712,521	-				+0.1
4,712,521	-				+0.8
4,712,612	+				-0.0
4,712,612	+				+0.3
4,712,613	-				+0.7
4,712,613	-				+0.2
4,712,613	-				-1.2
4,712,613	-				-0.4
4,712,764	+		PfGW456L13_4200	0.78	+0.1
4,712,764	+		PfGW456L13_4200	0.78	+0.9
4,712,765	-		PfGW456L13_4200	0.78	+0.4
4,712,765	-				+1.6
4,712,765	-		PfGW456L13_4200	0.78	+0.5
4,712,765	-		PfGW456L13_4200	0.78	-0.7
4,712,765	-		PfGW456L13_4200	0.78	-1.4
4,712,765	-		PfGW456L13_4200	0.78	-3.2
4,712,799	+				-0.1
4,712,799	+				-1.3
4,712,842	+				-1.1
4,712,842	+				+0.3
4,712,843	-				-1.2
4,712,843	-				-0.4
4,712,881	+		PfGW456L13_4201	0.10	+1.2
4,712,881	+		PfGW456L13_4201	0.10	-0.4
4,712,881	+		PfGW456L13_4201	0.10	+0.6
4,712,882	-		PfGW456L13_4201	0.10	-0.1
4,712,908	+		PfGW456L13_4201	0.13	-0.7
4,712,908	+		PfGW456L13_4201	0.13	+1.6
4,712,909	-		PfGW456L13_4201	0.14	-1.2
4,712,909	-		PfGW456L13_4201	0.14	-0.5
4,712,909	-		PfGW456L13_4201	0.14	+0.4
4,712,909	-		PfGW456L13_4201	0.14	-0.5
4,712,950	+				+1.6
4,712,950	+		PfGW456L13_4201	0.19	+1.9
4,712,950	+		PfGW456L13_4201	0.19	+0.2
4,712,951	-		PfGW456L13_4201	0.19	-1.3
4,713,037	+		PfGW456L13_4201	0.29	+0.6
4,713,037	+		PfGW456L13_4201	0.29	-0.9
4,713,037	+		PfGW456L13_4201	0.29	+1.6
4,713,037	+		PfGW456L13_4201	0.29	-0.7
4,713,037	+		PfGW456L13_4201	0.29	+0.1
4,713,037	+		PfGW456L13_4201	0.29	-0.4
4,713,037	+		PfGW456L13_4201	0.29	+0.3
4,713,038	-		PfGW456L13_4201	0.29	-0.9
4,713,038	-		PfGW456L13_4201	0.29	-0.7
4,713,038	-		PfGW456L13_4201	0.29	+1.1
4,713,038	-		PfGW456L13_4201	0.29	-1.5
4,713,038	-		PfGW456L13_4201	0.29	+0.2
4,713,038	-		PfGW456L13_4201	0.29	+0.2
4,713,038	-		PfGW456L13_4201	0.29	-1.3
4,713,043	+		PfGW456L13_4201	0.30	-0.5
4,713,044	-		PfGW456L13_4201	0.30	-0.4
4,713,083	-		PfGW456L13_4201	0.35	+0.4
4,713,103	+		PfGW456L13_4201	0.38	+1.1
4,713,104	-		PfGW456L13_4201	0.38	+0.5
4,713,104	-		PfGW456L13_4201	0.38	+0.2
4,713,104	-		PfGW456L13_4201	0.38	+1.1
4,713,104	-		PfGW456L13_4201	0.38	+1.2
4,713,104	-		PfGW456L13_4201	0.38	-1.2
4,713,364	+		PfGW456L13_4201	0.70	-0.5
4,713,470	+		PfGW456L13_4201	0.83	-1.4
4,713,470	+		PfGW456L13_4201	0.83	-1.2
4,713,470	+		PfGW456L13_4201	0.83	+0.6
4,713,777	+		PfGW456L13_4202	0.21	-0.2
4,713,777	+		PfGW456L13_4202	0.21	-1.4
4,713,778	-		PfGW456L13_4202	0.21	-1.1
4,713,796	-		PfGW456L13_4202	0.23	+0.9
4,713,924	-		PfGW456L13_4202	0.38	-0.0
4,714,032	+		PfGW456L13_4202	0.51	+0.6
4,714,033	-		PfGW456L13_4202	0.51	+0.8
4,714,033	-		PfGW456L13_4202	0.51	+1.5
4,714,033	-		PfGW456L13_4202	0.51	-2.7
4,714,033	-		PfGW456L13_4202	0.51	+0.2
4,714,059	+		PfGW456L13_4202	0.54	-0.3
4,714,059	+		PfGW456L13_4202	0.54	+0.9
4,714,059	+		PfGW456L13_4202	0.54	-0.3
4,714,059	+		PfGW456L13_4202	0.54	+0.8
4,714,059	+		PfGW456L13_4202	0.54	+1.3
4,714,060	-		PfGW456L13_4202	0.54	-2.1
4,714,060	-		PfGW456L13_4202	0.54	-0.7
4,714,060	-		PfGW456L13_4202	0.54	-0.7
4,714,060	-		PfGW456L13_4202	0.54	+0.8
4,714,060	-		PfGW456L13_4202	0.54	+1.2
4,714,065	+		PfGW456L13_4202	0.55	-0.0
4,714,065	+		PfGW456L13_4202	0.55	-0.3
4,714,065	+		PfGW456L13_4202	0.55	-0.6
4,714,066	-		PfGW456L13_4202	0.55	-0.7
4,714,066	-		PfGW456L13_4202	0.55	-0.1
4,714,066	-		PfGW456L13_4202	0.55	-1.1
4,714,066	-		PfGW456L13_4202	0.55	+2.6
4,714,171	-		PfGW456L13_4202	0.67	-1.3
4,714,254	+		PfGW456L13_4202	0.77	-0.7
4,714,254	+		PfGW456L13_4202	0.77	+1.3
4,714,266	+		PfGW456L13_4202	0.78	-0.2
4,714,267	-		PfGW456L13_4202	0.78	+0.3
4,714,267	-		PfGW456L13_4202	0.78	-0.9
4,714,431	+				-1.4
4,714,431	+				+0.6
4,714,431	+				-1.0
4,714,431	+				-0.8
4,714,432	-				-0.2
4,714,432	-				-0.4
4,714,432	-				+0.2
4,714,432	-				+0.6
4,714,432	-				-1.4
4,714,432	-				+0.2
4,714,432	-				+1.5
4,714,432	-				+3.0
4,714,469	-				-0.2
4,714,469	-				-0.3
4,714,486	+				+0.0
4,714,486	+				+0.3
4,714,486	+				+0.1
4,714,486	+				-0.5
4,714,486	+				-0.5
4,714,486	+				-0.2
4,714,486	+				-0.8
4,714,486	+				+0.8
4,714,487	-				+0.9
4,714,487	-				-1.6
4,714,487	-				-0.6
4,714,487	-				+1.6
4,714,487	-				+0.5
4,714,487	-				-1.4
4,714,487	-				+0.6
4,714,487	-				-0.4
4,714,487	-				-0.1
4,714,487	-				-0.4
4,714,490	+				-2.0
4,714,490	+				+1.1
4,714,490	+				-0.1
4,714,490	+				-1.6
4,714,491	-				-0.2
4,714,491	-				-0.6
4,714,491	-				+1.5
4,714,491	-				-2.4
4,714,491	-				-1.2
4,714,491	-				-2.0
4,714,491	-				-1.7
4,714,534	+		PfGW456L13_4203	0.12	+1.3
4,714,534	+		PfGW456L13_4203	0.12	+0.5
4,714,534	+		PfGW456L13_4203	0.12	-1.7
4,714,534	+		PfGW456L13_4203	0.12	+0.3
4,714,535	-		PfGW456L13_4203	0.12	+1.1
4,714,535	-		PfGW456L13_4203	0.12	+0.5
4,714,535	-		PfGW456L13_4203	0.12	-1.4
4,714,535	-		PfGW456L13_4203	0.12	-0.7
4,714,535	-		PfGW456L13_4203	0.12	+0.5
4,714,535	-		PfGW456L13_4203	0.12	-1.5
4,714,594	+		PfGW456L13_4203	0.20	-0.2
4,714,594	+				+1.6
4,714,594	+		PfGW456L13_4203	0.20	-1.4
4,714,594	+		PfGW456L13_4203	0.20	+0.2
4,714,595	-		PfGW456L13_4203	0.20	-0.6
4,714,595	-		PfGW456L13_4203	0.20	-0.2
4,714,595	-		PfGW456L13_4203	0.20	-0.2