Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1205

Experiment: D-Glucosamine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (C)
1,344,632	+				+0.6
1,344,632	+				-1.8
1,344,632	+				+0.3
1,344,632	+				+0.0
1,344,632	+				+0.0
1,344,632	+				+0.4
1,344,632	+				+2.8
1,344,632	+				-0.9
1,344,632	+				+0.8
1,344,632	+				-0.1
1,344,633	-				+2.3
1,344,633	-				+1.8
1,344,633	-				+1.6
1,344,633	-				+0.3
1,344,633	-				+2.3
1,344,633	-				+1.4
1,344,633	-				+3.7
1,344,633	-				+2.1
1,344,633	-				+2.9
1,344,633	-				+3.3
1,344,757	+		PfGW456L13_1204	0.14	+4.4
1,344,757	+		PfGW456L13_1204	0.14	+3.8
1,344,869	+		PfGW456L13_1204	0.25	+3.4
1,344,870	-		PfGW456L13_1204	0.25	+3.5
1,344,918	-		PfGW456L13_1204	0.30	+5.1
1,344,943	+		PfGW456L13_1204	0.32	-1.0
1,344,943	+		PfGW456L13_1204	0.32	+3.7
1,344,944	-		PfGW456L13_1204	0.32	+3.4
1,344,944	-		PfGW456L13_1204	0.32	+2.9
1,345,048	+		PfGW456L13_1204	0.42	+4.0
1,345,048	+		PfGW456L13_1204	0.42	+3.5
1,345,048	+		PfGW456L13_1204	0.42	+2.8
1,345,048	+		PfGW456L13_1204	0.42	+0.9
1,345,048	+		PfGW456L13_1204	0.42	+3.6
1,345,049	-		PfGW456L13_1204	0.42	+1.8
1,345,049	-		PfGW456L13_1204	0.42	+4.3
1,345,096	+		PfGW456L13_1204	0.47	+4.7
1,345,096	+		PfGW456L13_1204	0.47	+4.2
1,345,096	+		PfGW456L13_1204	0.47	+4.5
1,345,096	+		PfGW456L13_1204	0.47	+4.3
1,345,097	-		PfGW456L13_1204	0.47	+3.1
1,345,097	-		PfGW456L13_1204	0.47	+3.3
1,345,097	-		PfGW456L13_1204	0.47	+3.6
1,345,216	+		PfGW456L13_1204	0.59	+4.2
1,345,216	+		PfGW456L13_1204	0.59	+3.7
1,345,216	+		PfGW456L13_1204	0.59	+3.5
1,345,216	+		PfGW456L13_1204	0.59	+4.6
1,345,216	+		PfGW456L13_1204	0.59	+4.5
1,345,216	+		PfGW456L13_1204	0.59	+3.9
1,345,216	+		PfGW456L13_1204	0.59	+3.7
1,345,217	-		PfGW456L13_1204	0.59	+5.6
1,345,217	-		PfGW456L13_1204	0.59	+3.8
1,345,217	-		PfGW456L13_1204	0.59	+2.7
1,345,217	-		PfGW456L13_1204	0.59	+1.8
1,345,217	-		PfGW456L13_1204	0.59	+3.5
1,345,217	-		PfGW456L13_1204	0.59	+2.9
1,345,217	-		PfGW456L13_1204	0.59	+0.6
1,345,282	+		PfGW456L13_1204	0.65	+2.8
1,345,282	+		PfGW456L13_1204	0.65	+4.7
1,345,282	+		PfGW456L13_1204	0.65	+0.7
1,345,283	-		PfGW456L13_1204	0.65	+4.3
1,345,283	-		PfGW456L13_1204	0.65	+3.6
1,345,283	-		PfGW456L13_1204	0.65	+2.8
1,345,297	+		PfGW456L13_1204	0.67	+3.8
1,345,297	+		PfGW456L13_1204	0.67	+4.3
1,345,297	+		PfGW456L13_1204	0.67	+2.8
1,345,373	-		PfGW456L13_1204	0.74	+1.9
1,345,549	+				+4.1
1,345,549	+				+2.9
1,345,549	+				+4.4
1,345,549	+				+2.9
1,345,549	+				+3.8
1,345,549	+				+3.7
1,345,549	+				+4.3
1,345,550	-				-0.5
1,345,550	-				+2.8
1,345,550	-				+5.7
1,345,550	-				+3.9
1,345,550	-				+4.0
1,345,550	-				+2.9
1,345,553	+				+3.3
1,345,553	+				+3.9
1,345,553	+				+4.1
1,345,553	+				+4.3
1,345,553	+				+4.2
1,345,554	-				+4.3
1,345,554	-				+4.3
1,345,554	-				+2.0
1,345,554	-				+3.3
1,345,554	-				+4.2
1,345,554	-				+1.2
1,345,554	-				+1.7
1,345,598	+				+2.9
1,345,598	+				+3.9
1,345,598	+				+3.6
1,345,598	+				+3.7
1,345,598	+				+3.3
1,345,598	+				+3.8
1,345,598	+				+3.8
1,345,598	+				+1.9
1,345,598	+				+3.4
1,345,598	+				+3.7
1,345,598	+				+2.8
1,345,599	-				+1.3
1,345,599	-				+3.4
1,345,599	-				+4.5
1,345,599	-				+3.4
1,345,599	-				+1.8
1,345,599	-				+3.9
1,345,599	-				+3.1
1,345,599	-				+3.5
1,345,599	-				+1.7
1,345,599	-				+3.1
1,345,599	-				+3.5
1,345,599	-				+3.7
1,345,599	-				+2.4
1,345,599	-				+4.1
1,345,599	-				+1.2
1,345,599	-				+2.6
1,345,599	-				+4.7
1,345,599	-				+3.3
1,345,692	-				+2.3
1,345,737	+		PfGW456L13_1205	0.16	+0.3
1,345,737	+		PfGW456L13_1205	0.16	+3.1
1,345,737	+		PfGW456L13_1205	0.16	+3.3
1,345,738	-		PfGW456L13_1205	0.16	+2.8
1,345,738	-		PfGW456L13_1205	0.16	+1.1
1,345,818	+		PfGW456L13_1205	0.28	+2.7
1,345,818	+		PfGW456L13_1205	0.28	+2.7
1,345,818	+		PfGW456L13_1205	0.28	+2.8
1,345,819	-		PfGW456L13_1205	0.28	+2.3
1,345,819	-		PfGW456L13_1205	0.28	+4.2
1,345,819	-		PfGW456L13_1205	0.28	+2.9
1,345,819	-		PfGW456L13_1205	0.28	+3.7
1,345,819	-		PfGW456L13_1205	0.28	+2.9
1,345,819	-		PfGW456L13_1205	0.28	+0.8
1,345,819	-		PfGW456L13_1205	0.28	+2.7
1,345,819	-		PfGW456L13_1205	0.28	+2.2
1,345,857	+		PfGW456L13_1205	0.33	+2.7
1,346,062	+		PfGW456L13_1205	0.64	+2.0
1,346,109	+		PfGW456L13_1205	0.71	+2.1
1,346,110	-		PfGW456L13_1205	0.71	+2.1
1,346,110	-		PfGW456L13_1205	0.71	+2.2
1,346,284	+				+0.6
1,346,284	+				+0.4
1,346,284	+				-0.4
1,346,285	-				+0.8
1,346,285	-				+0.6
1,346,285	-				-0.2
1,346,287	+				-0.4
1,346,287	+				+0.2
1,346,287	+				+0.1
1,346,288	-				+0.7
1,346,288	-				-1.8
1,346,288	-				-0.9
1,346,288	-				+2.3
1,346,288	-				+1.1
1,346,288	-				-2.5
1,346,288	-				+0.2
1,346,288	-				-0.6
1,346,351	+				-0.4
1,346,492	+		PfGW456L13_1206	0.17	-1.0
1,346,821	+		PfGW456L13_1206	0.64	-0.9
1,346,821	+		PfGW456L13_1206	0.64	-0.0
1,346,821	+		PfGW456L13_1206	0.64	+0.3
1,346,822	-		PfGW456L13_1206	0.64	+0.3
1,346,822	-		PfGW456L13_1206	0.64	+1.1
1,346,822	-		PfGW456L13_1206	0.64	-0.8
1,346,863	+		PfGW456L13_1206	0.70	-0.7
1,346,863	+		PfGW456L13_1206	0.70	-0.4
1,346,864	-		PfGW456L13_1206	0.70	+0.1
1,347,031	-				-0.6
1,347,037	+				-1.7
1,347,037	+				-1.7
1,347,038	-				-0.0
1,347,039	+				-0.9
1,347,040	-				-1.9
1,347,040	-				+1.0
1,347,133	+				+1.1
1,347,133	+				+0.9
1,347,133	+				-1.3
1,347,133	+				-0.1
1,347,133	+				-1.4
1,347,133	+				+0.5
1,347,133	+				-0.0
1,347,133	+				+0.8
1,347,133	+				-0.9
1,347,133	+				+1.2
1,347,133	+				-2.4
1,347,161	+				-1.7
1,347,161	+				+1.2
1,347,162	-				-1.2