Experiment: Trisodium citrate (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS22900 and PFLU_RS22905 overlap by 4 nucleotides PFLU_RS22905 and PFLU_RS22910 are separated by 9 nucleotides PFLU_RS22910 and PFLU_RS22915 are separated by 73 nucleotides
PFLU_RS22900: PFLU_RS22900 - OmpA family protein, at 5,151,668 to 5,152,483
_RS22900
PFLU_RS22905: PFLU_RS22905 - DUF4398 domain-containing protein, at 5,152,480 to 5,152,842
_RS22905
PFLU_RS22910: PFLU_RS22910 - transporter substrate-binding domain-containing protein, at 5,152,852 to 5,153,667
_RS22910
PFLU_RS22915: PFLU_RS22915 - electron transfer flavoprotein subunit alpha, at 5,153,741 to 5,154,670
_RS22915
Position (kb) 5152
5153 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5151.483 kb on - strand at 5151.483 kb on - strand at 5151.504 kb on + strand at 5151.517 kb on + strand at 5151.518 kb on - strand at 5151.580 kb on + strand at 5151.780 kb on + strand, within PFLU_RS22900 at 5151.780 kb on + strand, within PFLU_RS22900 at 5151.781 kb on - strand, within PFLU_RS22900 at 5151.821 kb on + strand, within PFLU_RS22900 at 5151.822 kb on - strand, within PFLU_RS22900 at 5151.822 kb on - strand, within PFLU_RS22900 at 5151.822 kb on - strand, within PFLU_RS22900 at 5151.822 kb on - strand, within PFLU_RS22900 at 5151.827 kb on + strand, within PFLU_RS22900 at 5151.827 kb on + strand, within PFLU_RS22900 at 5151.827 kb on + strand, within PFLU_RS22900 at 5151.827 kb on + strand, within PFLU_RS22900 at 5151.828 kb on - strand, within PFLU_RS22900 at 5151.828 kb on - strand, within PFLU_RS22900 at 5151.900 kb on + strand, within PFLU_RS22900 at 5151.948 kb on - strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.087 kb on + strand, within PFLU_RS22900 at 5152.088 kb on - strand, within PFLU_RS22900 at 5152.088 kb on - strand, within PFLU_RS22900 at 5152.088 kb on - strand, within PFLU_RS22900 at 5152.088 kb on - strand, within PFLU_RS22900 at 5152.088 kb on - strand, within PFLU_RS22900 at 5152.088 kb on - strand, within PFLU_RS22900 at 5152.088 kb on - strand, within PFLU_RS22900 at 5152.219 kb on - strand, within PFLU_RS22900 at 5152.233 kb on + strand, within PFLU_RS22900 at 5152.233 kb on + strand, within PFLU_RS22900 at 5152.239 kb on + strand, within PFLU_RS22900 at 5152.239 kb on + strand, within PFLU_RS22900 at 5152.240 kb on - strand, within PFLU_RS22900 at 5152.240 kb on - strand, within PFLU_RS22900 at 5152.240 kb on - strand, within PFLU_RS22900 at 5152.240 kb on - strand, within PFLU_RS22900 at 5152.270 kb on - strand, within PFLU_RS22900 at 5152.270 kb on - strand, within PFLU_RS22900 at 5152.270 kb on - strand, within PFLU_RS22900 at 5152.337 kb on + strand, within PFLU_RS22900 at 5152.337 kb on + strand, within PFLU_RS22900 at 5152.338 kb on - strand, within PFLU_RS22900 at 5152.533 kb on + strand, within PFLU_RS22905 at 5152.634 kb on + strand, within PFLU_RS22905 at 5152.634 kb on + strand, within PFLU_RS22905 at 5152.634 kb on + strand, within PFLU_RS22905 at 5152.634 kb on + strand, within PFLU_RS22905 at 5152.635 kb on - strand, within PFLU_RS22905 at 5152.635 kb on - strand, within PFLU_RS22905 at 5152.635 kb on - strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.759 kb on + strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5152.760 kb on - strand, within PFLU_RS22905 at 5153.021 kb on + strand, within PFLU_RS22910 at 5153.021 kb on + strand, within PFLU_RS22910 at 5153.022 kb on - strand, within PFLU_RS22910 at 5153.105 kb on + strand, within PFLU_RS22910 at 5153.105 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.123 kb on + strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.124 kb on - strand, within PFLU_RS22910 at 5153.282 kb on + strand, within PFLU_RS22910 at 5153.283 kb on - strand, within PFLU_RS22910 at 5153.319 kb on - strand, within PFLU_RS22910 at 5153.319 kb on - strand, within PFLU_RS22910 at 5153.348 kb on + strand, within PFLU_RS22910 at 5153.348 kb on + strand, within PFLU_RS22910 at 5153.348 kb on + strand, within PFLU_RS22910 at 5153.348 kb on + strand, within PFLU_RS22910 at 5153.348 kb on + strand, within PFLU_RS22910 at 5153.349 kb on - strand, within PFLU_RS22910 at 5153.349 kb on - strand, within PFLU_RS22910 at 5153.349 kb on - strand, within PFLU_RS22910 at 5153.349 kb on - strand, within PFLU_RS22910 at 5153.349 kb on - strand, within PFLU_RS22910 at 5153.349 kb on - strand, within PFLU_RS22910 at 5153.349 kb on - strand, within PFLU_RS22910 at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.722 kb on + strand at 5153.723 kb on - strand at 5153.723 kb on - strand at 5153.723 kb on - strand at 5153.723 kb on - strand at 5153.723 kb on - strand at 5153.724 kb on + strand at 5153.724 kb on + strand at 5153.724 kb on + strand at 5153.724 kb on + strand at 5153.724 kb on + strand at 5153.724 kb on + strand at 5153.725 kb on - strand at 5153.725 kb on - strand at 5153.725 kb on - strand at 5153.725 kb on - strand at 5153.725 kb on - strand at 5153.725 kb on - strand at 5153.725 kb on - strand at 5153.725 kb on - strand at 5153.742 kb on + strand at 5153.742 kb on + strand at 5153.742 kb on + strand at 5153.743 kb on - strand at 5153.743 kb on - strand at 5153.743 kb on - strand at 5153.743 kb on - strand at 5153.743 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C); with MOPS remove 5,151,483 - +1.2 5,151,483 - -0.7 5,151,504 + +0.5 5,151,517 + +0.5 5,151,518 - -0.0 5,151,580 + +0.8 5,151,780 + PFLU_RS22900 0.14 -1.9 5,151,780 + PFLU_RS22900 0.14 -1.6 5,151,781 - PFLU_RS22900 0.14 +0.1 5,151,821 + PFLU_RS22900 0.19 +0.2 5,151,822 - PFLU_RS22900 0.19 -3.1 5,151,822 - PFLU_RS22900 0.19 -0.2 5,151,822 - PFLU_RS22900 0.19 -0.9 5,151,822 - PFLU_RS22900 0.19 -0.6 5,151,827 + PFLU_RS22900 0.19 +0.0 5,151,827 + PFLU_RS22900 0.19 +0.4 5,151,827 + PFLU_RS22900 0.19 -0.7 5,151,827 + PFLU_RS22900 0.19 -0.2 5,151,828 - PFLU_RS22900 0.20 -0.5 5,151,828 - PFLU_RS22900 0.20 -0.3 5,151,900 + PFLU_RS22900 0.28 -0.3 5,151,948 - PFLU_RS22900 0.34 -0.1 5,152,087 + PFLU_RS22900 0.51 -1.0 5,152,087 + PFLU_RS22900 0.51 -0.2 5,152,087 + PFLU_RS22900 0.51 -0.7 5,152,087 + PFLU_RS22900 0.51 -0.8 5,152,087 + PFLU_RS22900 0.51 +0.5 5,152,087 + PFLU_RS22900 0.51 -0.3 5,152,087 + PFLU_RS22900 0.51 +1.2 5,152,087 + PFLU_RS22900 0.51 -0.5 5,152,087 + PFLU_RS22900 0.51 -0.2 5,152,087 + PFLU_RS22900 0.51 -1.1 5,152,087 + PFLU_RS22900 0.51 +0.3 5,152,087 + PFLU_RS22900 0.51 +0.3 5,152,087 + PFLU_RS22900 0.51 -0.6 5,152,087 + PFLU_RS22900 0.51 -0.7 5,152,087 + PFLU_RS22900 0.51 -0.7 5,152,087 + PFLU_RS22900 0.51 -0.1 5,152,087 + PFLU_RS22900 0.51 -1.4 5,152,087 + PFLU_RS22900 0.51 -0.7 5,152,088 - PFLU_RS22900 0.51 -1.1 5,152,088 - PFLU_RS22900 0.51 -0.7 5,152,088 - PFLU_RS22900 0.51 -0.5 5,152,088 - PFLU_RS22900 0.51 -1.6 5,152,088 - PFLU_RS22900 0.51 -1.0 5,152,088 - PFLU_RS22900 0.51 -0.7 5,152,088 - PFLU_RS22900 0.51 -0.7 5,152,219 - PFLU_RS22900 0.68 +0.2 5,152,233 + PFLU_RS22900 0.69 +0.0 5,152,233 + PFLU_RS22900 0.69 -0.5 5,152,239 + PFLU_RS22900 0.70 +0.1 5,152,239 + PFLU_RS22900 0.70 +0.1 5,152,240 - PFLU_RS22900 0.70 +0.2 5,152,240 - PFLU_RS22900 0.70 -0.6 5,152,240 - PFLU_RS22900 0.70 +1.8 5,152,240 - PFLU_RS22900 0.70 -0.7 5,152,270 - PFLU_RS22900 0.74 -1.7 5,152,270 - PFLU_RS22900 0.74 +3.0 5,152,270 - PFLU_RS22900 0.74 -1.0 5,152,337 + PFLU_RS22900 0.82 -0.3 5,152,337 + PFLU_RS22900 0.82 -0.4 5,152,338 - PFLU_RS22900 0.82 +0.9 5,152,533 + PFLU_RS22905 0.15 +0.3 5,152,634 + PFLU_RS22905 0.42 -1.3 5,152,634 + PFLU_RS22905 0.42 -0.0 5,152,634 + PFLU_RS22905 0.42 -0.3 5,152,634 + PFLU_RS22905 0.42 -1.4 5,152,635 - PFLU_RS22905 0.43 +0.3 5,152,635 - PFLU_RS22905 0.43 -0.9 5,152,635 - PFLU_RS22905 0.43 +0.0 5,152,759 + PFLU_RS22905 0.77 +0.5 5,152,759 + PFLU_RS22905 0.77 -0.1 5,152,759 + PFLU_RS22905 0.77 +0.7 5,152,759 + PFLU_RS22905 0.77 -1.6 5,152,759 + PFLU_RS22905 0.77 -0.9 5,152,759 + PFLU_RS22905 0.77 -0.4 5,152,759 + PFLU_RS22905 0.77 -0.4 5,152,759 + PFLU_RS22905 0.77 -1.3 5,152,759 + PFLU_RS22905 0.77 +1.2 5,152,760 - PFLU_RS22905 0.77 -0.3 5,152,760 - PFLU_RS22905 0.77 -1.1 5,152,760 - PFLU_RS22905 0.77 -2.6 5,152,760 - PFLU_RS22905 0.77 -1.8 5,152,760 - PFLU_RS22905 0.77 -2.2 5,152,760 - PFLU_RS22905 0.77 -1.0 5,152,760 - PFLU_RS22905 0.77 -0.9 5,152,760 - PFLU_RS22905 0.77 -1.0 5,152,760 - PFLU_RS22905 0.77 -2.5 5,152,760 - PFLU_RS22905 0.77 +0.2 5,152,760 - PFLU_RS22905 0.77 +0.6 5,152,760 - PFLU_RS22905 0.77 -1.7 5,152,760 - PFLU_RS22905 0.77 +1.1 5,152,760 - PFLU_RS22905 0.77 -2.2 5,152,760 - PFLU_RS22905 0.77 -0.2 5,153,021 + PFLU_RS22910 0.21 +1.0 5,153,021 + PFLU_RS22910 0.21 -0.5 5,153,022 - PFLU_RS22910 0.21 +0.5 5,153,105 + PFLU_RS22910 0.31 +0.9 5,153,105 + PFLU_RS22910 0.31 -2.0 5,153,123 + PFLU_RS22910 0.33 +1.6 5,153,123 + PFLU_RS22910 0.33 -0.1 5,153,123 + PFLU_RS22910 0.33 +0.2 5,153,123 + PFLU_RS22910 0.33 +0.6 5,153,123 + PFLU_RS22910 0.33 +0.1 5,153,123 + PFLU_RS22910 0.33 +0.7 5,153,123 + PFLU_RS22910 0.33 -0.5 5,153,123 + PFLU_RS22910 0.33 -0.2 5,153,123 + PFLU_RS22910 0.33 +1.3 5,153,124 - PFLU_RS22910 0.33 -3.2 5,153,124 - PFLU_RS22910 0.33 +0.5 5,153,124 - PFLU_RS22910 0.33 +0.5 5,153,124 - PFLU_RS22910 0.33 -1.1 5,153,124 - PFLU_RS22910 0.33 -0.3 5,153,124 - PFLU_RS22910 0.33 -0.2 5,153,124 - PFLU_RS22910 0.33 -2.0 5,153,124 - PFLU_RS22910 0.33 -0.5 5,153,124 - PFLU_RS22910 0.33 +1.0 5,153,124 - PFLU_RS22910 0.33 -2.1 5,153,124 - PFLU_RS22910 0.33 -0.5 5,153,124 - PFLU_RS22910 0.33 -1.3 5,153,124 - PFLU_RS22910 0.33 -1.5 5,153,124 - PFLU_RS22910 0.33 -0.2 5,153,282 + PFLU_RS22910 0.53 -2.5 5,153,283 - PFLU_RS22910 0.53 -0.2 5,153,319 - PFLU_RS22910 0.57 +0.5 5,153,319 - PFLU_RS22910 0.57 -0.2 5,153,348 + PFLU_RS22910 0.61 -0.5 5,153,348 + PFLU_RS22910 0.61 -0.1 5,153,348 + PFLU_RS22910 0.61 +0.9 5,153,348 + PFLU_RS22910 0.61 -0.4 5,153,348 + PFLU_RS22910 0.61 -0.3 5,153,349 - PFLU_RS22910 0.61 -0.4 5,153,349 - PFLU_RS22910 0.61 -0.5 5,153,349 - PFLU_RS22910 0.61 +0.8 5,153,349 - PFLU_RS22910 0.61 -0.4 5,153,349 - PFLU_RS22910 0.61 -1.3 5,153,349 - PFLU_RS22910 0.61 +0.5 5,153,349 - PFLU_RS22910 0.61 +0.8 5,153,722 + -1.3 5,153,722 + -0.6 5,153,722 + -1.5 5,153,722 + -1.2 5,153,722 + -1.5 5,153,722 + -2.4 5,153,722 + -1.2 5,153,722 + +0.4 5,153,722 + -1.2 5,153,722 + +1.5 5,153,723 - +0.1 5,153,723 - -0.7 5,153,723 - +0.3 5,153,723 - +0.7 5,153,723 - +0.5 5,153,724 + -1.9 5,153,724 + -2.2 5,153,724 + +0.2 5,153,724 + -2.7 5,153,724 + +1.0 5,153,724 + -1.0 5,153,725 - +0.3 5,153,725 - +0.3 5,153,725 - -0.3 5,153,725 - -0.7 5,153,725 - +0.6 5,153,725 - +0.8 5,153,725 - +0.3 5,153,725 - -1.5 5,153,742 + -0.7 5,153,742 + -1.5 5,153,742 + -0.5 5,153,743 - -2.7 5,153,743 - -0.1 5,153,743 - -0.4 5,153,743 - -0.6 5,153,743 - -0.2
Or see this region's nucleotide sequence