Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS19160

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
4,331,697	-				-1.4
4,331,697	-				+1.3
4,331,822	-				-2.3
4,331,879	-				+0.6
4,331,898	-				+0.6
4,331,898	-				-0.8
4,331,898	-				+0.6
4,331,898	-				+1.2
4,331,898	-				-1.9
4,332,025	-		PFLU_RS19155	0.47	+1.6
4,332,041	-		PFLU_RS19155	0.53	+0.6
4,332,182	-				-0.0
4,332,182	-				-0.0
4,332,182	-				-0.4
4,332,182	-				+0.6
4,332,182	-				-0.0
4,332,182	-				-0.4
4,332,184	-				+1.6
4,332,184	-				-1.9
4,332,184	-				-1.0
4,332,184	-				-0.4
4,332,184	-				-0.4
4,332,184	-				+2.0
4,332,184	-				+0.6
4,332,184	-				-0.0
4,332,184	-				-0.2
4,332,184	-				-0.8
4,332,184	-				-0.8
4,332,184	-				+1.2
4,332,184	-				+3.4
4,332,184	-				+1.6
4,332,184	-				+1.6
4,332,184	-				-1.2
4,332,184	-				+0.6
4,332,186	-				+1.6
4,332,186	-				-0.0
4,332,186	-				+1.3
4,332,186	-				-0.4
4,332,186	-				-1.2
4,332,186	-				+2.6
4,332,186	-				+0.8
4,332,186	-				+0.6
4,332,186	-				-0.2
4,332,186	-				+2.0
4,332,186	-				-0.0
4,332,190	-				+0.7
4,332,190	-				+1.9
4,332,190	-				+1.6
4,332,256	-				-1.6
4,332,256	-				-1.4
4,332,256	-				-1.3
4,332,256	-				-1.1
4,332,268	-				+0.6
4,332,268	-				-0.0
4,332,268	-				-2.9
4,332,268	-				+0.8
4,332,270	-				+0.9
4,332,270	-				+0.2
4,332,320	-				+0.7
4,332,320	-				+0.7
4,332,320	-				+1.1
4,332,330	-				+1.0
4,332,330	-				+0.3
4,332,330	-				-0.2
4,332,376	-				+1.0
4,332,376	-				+0.6
4,332,376	-				-0.0
4,332,459	-				-1.6
4,332,459	-				+0.4
4,332,479	+				-2.1
4,332,480	-				-1.9
4,332,480	-				-1.2
4,332,480	-				-1.8
4,332,480	-				-1.0
4,332,591	+		PFLU_RS19160	0.11	-2.3
4,332,592	-		PFLU_RS19160	0.11	-0.0
4,332,684	+		PFLU_RS19160	0.15	-0.2
4,332,684	+		PFLU_RS19160	0.15	+0.3
4,332,707	+		PFLU_RS19160	0.16	-1.0
4,332,708	-		PFLU_RS19160	0.16	+0.4
4,332,728	+		PFLU_RS19160	0.17	-0.2
4,332,728	+		PFLU_RS19160	0.17	-1.2
4,332,728	+		PFLU_RS19160	0.17	-1.2
4,332,729	-		PFLU_RS19160	0.17	-2.8
4,332,729	-		PFLU_RS19160	0.17	-0.5
4,332,946	-		PFLU_RS19160	0.26	-0.7
4,332,946	-		PFLU_RS19160	0.26	+1.6
4,332,984	-		PFLU_RS19160	0.28	+0.6
4,332,984	-		PFLU_RS19160	0.28	-1.1
4,333,124	-		PFLU_RS19160	0.34	-2.8
4,333,124	-		PFLU_RS19160	0.34	-2.4
4,333,124	-		PFLU_RS19160	0.34	-1.2
4,333,124	-		PFLU_RS19160	0.34	+0.9
4,333,124	-		PFLU_RS19160	0.34	-0.1
4,333,124	-		PFLU_RS19160	0.34	-2.8
4,333,126	+		PFLU_RS19160	0.34	-0.6
4,333,126	+		PFLU_RS19160	0.34	+0.4
4,333,126	+		PFLU_RS19160	0.34	-0.0
4,333,127	-		PFLU_RS19160	0.34	-2.1
4,333,213	+		PFLU_RS19160	0.37	+0.8
4,333,213	+		PFLU_RS19160	0.37	-0.8
4,333,214	-		PFLU_RS19160	0.37	-1.6
4,333,214	-		PFLU_RS19160	0.37	-1.8
4,333,214	-		PFLU_RS19160	0.37	-1.3
4,333,214	-		PFLU_RS19160	0.37	-0.2
4,333,346	-		PFLU_RS19160	0.43	-0.2
4,333,346	-		PFLU_RS19160	0.43	-0.8
4,333,346	-		PFLU_RS19160	0.43	-2.1
4,333,360	+		PFLU_RS19160	0.43	-1.2
4,333,360	+		PFLU_RS19160	0.43	-1.2
4,333,360	+		PFLU_RS19160	0.43	-1.0
4,333,360	+		PFLU_RS19160	0.43	+1.0
4,333,361	-		PFLU_RS19160	0.44	-1.6
4,333,534	+		PFLU_RS19160	0.51	+2.6
4,333,534	+		PFLU_RS19160	0.51	+1.6
4,333,534	+		PFLU_RS19160	0.51	+1.1
4,333,534	+		PFLU_RS19160	0.51	-1.9
4,333,534	+		PFLU_RS19160	0.51	-1.0
4,333,534	+		PFLU_RS19160	0.51	-0.0
4,333,535	-		PFLU_RS19160	0.51	+1.0
4,333,535	-		PFLU_RS19160	0.51	-0.4
4,333,535	-		PFLU_RS19160	0.51	+3.6
4,333,535	-		PFLU_RS19160	0.51	-0.2
4,333,535	-		PFLU_RS19160	0.51	-1.6
4,333,535	-		PFLU_RS19160	0.51	+0.1
4,333,535	-		PFLU_RS19160	0.51	-1.2
4,333,535	-		PFLU_RS19160	0.51	-1.1
4,333,572	+		PFLU_RS19160	0.52	-0.8
4,333,572	+		PFLU_RS19160	0.52	-1.6
4,333,602	-		PFLU_RS19160	0.54	+1.6
4,333,644	-		PFLU_RS19160	0.55	+0.4
4,333,753	+		PFLU_RS19160	0.60	-1.8
4,333,754	-		PFLU_RS19160	0.60	-1.8
4,333,754	-		PFLU_RS19160	0.60	-1.8
4,333,846	+		PFLU_RS19160	0.64	-0.4
4,333,846	+		PFLU_RS19160	0.64	-2.3
4,333,846	+		PFLU_RS19160	0.64	-0.2
4,333,846	+		PFLU_RS19160	0.64	-1.1
4,333,846	+		PFLU_RS19160	0.64	-2.0
4,333,847	-		PFLU_RS19160	0.64	+0.1
4,333,847	-		PFLU_RS19160	0.64	-1.3
4,333,847	-		PFLU_RS19160	0.64	-0.7
4,333,847	-		PFLU_RS19160	0.64	-1.4
4,333,847	-		PFLU_RS19160	0.64	+0.3
4,333,847	-		PFLU_RS19160	0.64	-0.9
4,333,847	-		PFLU_RS19160	0.64	+0.2
4,333,956	-		PFLU_RS19160	0.68	-2.7
4,334,042	-		PFLU_RS19160	0.72	-2.5
4,334,042	-		PFLU_RS19160	0.72	+1.0
4,334,044	+		PFLU_RS19160	0.72	-0.6
4,334,044	+		PFLU_RS19160	0.72	+0.8
4,334,044	+		PFLU_RS19160	0.72	-1.6
4,334,045	-		PFLU_RS19160	0.72	-1.3
4,334,045	-		PFLU_RS19160	0.72	-0.6
4,334,045	-		PFLU_RS19160	0.72	-1.8
4,334,305	+		PFLU_RS19160	0.83	+1.6
4,334,305	+		PFLU_RS19160	0.83	-1.2
4,334,305	+		PFLU_RS19160	0.83	-0.0
4,334,305	+		PFLU_RS19160	0.83	-2.7
4,334,305	+		PFLU_RS19160	0.83	-1.6
4,334,305	+		PFLU_RS19160	0.83	-0.8
4,334,305	+		PFLU_RS19160	0.83	-2.7
4,334,305	+		PFLU_RS19160	0.83	-1.0
4,334,305	+		PFLU_RS19160	0.83	-0.4
4,334,305	+		PFLU_RS19160	0.83	-0.3
4,334,305	+		PFLU_RS19160	0.83	+1.2
4,334,306	-		PFLU_RS19160	0.83	-0.4
4,334,306	-		PFLU_RS19160	0.83	-0.6
4,334,306	-		PFLU_RS19160	0.83	-3.1
4,334,306	-		PFLU_RS19160	0.83	-1.1
4,334,306	-		PFLU_RS19160	0.83	-0.8
4,334,306	-		PFLU_RS19160	0.83	-2.2
4,334,306	-		PFLU_RS19160	0.83	-2.0
4,334,306	-		PFLU_RS19160	0.83	-1.8
4,334,306	-		PFLU_RS19160	0.83	-0.4
4,334,334	+		PFLU_RS19160	0.84	+0.2
4,334,618	+				-0.8
4,334,727	-				-0.9
4,334,743	-				-2.6
4,334,743	-				+0.0
4,334,788	-				+0.8
4,334,836	-				-0.8
4,334,868	+				+1.0
4,334,868	+				+1.4
4,334,869	-				+0.1
4,334,869	-				+0.1
4,334,869	-				-0.1
4,334,869	-				-0.2
4,334,871	-				+0.8
4,334,891	-				+1.0
4,334,932	+				-1.0
4,334,932	+				+1.0
4,334,933	-				-0.3
4,334,936	+				+1.1
4,334,936	+				-0.9
4,334,936	+				+0.8
4,334,936	+				+1.6
4,334,936	+				+1.6
4,334,937	-				-0.9
4,334,937	-				+1.6
4,334,937	-				-1.3
4,334,937	-				+0.1
4,334,937	-				-0.4
4,334,937	-				+0.6
4,334,938	+				-1.8
4,334,938	+				+1.6
4,334,938	+				-1.8
4,334,938	+				+2.2
4,334,938	+				+2.6
4,334,938	+				+1.6
4,334,938	+				-0.0
4,334,938	+				-2.0
4,334,938	+				-0.5
4,334,938	+				-1.2
4,334,938	+				-0.0
4,334,938	+				-1.2
4,334,938	+				+1.9
4,334,938	+				+0.3
4,334,938	+				-0.8
4,334,938	+				-0.8
4,334,938	+				+1.4
4,334,938	+				+0.4
4,334,938	+				+0.8
4,334,938	+				+3.1
4,334,938	+				+0.4
4,334,938	+				-1.0
4,334,938	+				-0.1
4,334,939	-				+1.6
4,334,939	-				-1.0
4,334,939	-				-1.4
4,334,939	-				+0.5
4,334,939	-				-1.1
4,334,939	-				-1.2
4,334,939	-				+1.9
4,334,939	-				-2.0
4,334,939	-				-1.7
4,334,939	-				-0.0
4,334,939	-				-1.9
4,334,939	-				+1.8
4,334,939	-				-0.5
4,334,939	-				-0.1
4,334,939	-				-0.0
4,334,939	-				-1.6
4,334,939	-				-0.3
4,334,954	+				+0.2
4,334,954	+				+0.8
4,334,954	+				-0.0
4,334,954	+				+1.6
4,334,955	-				-1.6
4,334,955	-				+2.2
4,334,955	-				-0.9
4,334,955	-				+0.7
4,334,961	+				-1.0
4,334,962	-				+0.1
4,334,962	-				+0.1
4,334,962	-				-1.4
4,334,962	-				+0.7
4,334,962	-				-0.2
4,334,962	-				-0.4
4,334,962	-				-1.6
4,334,962	-				-1.2
4,334,963	+				+0.6
4,334,988	-				+2.9
4,334,988	-				+1.6
4,334,988	-				+0.8
4,334,988	-				-1.2
4,335,016	+				+1.0
4,335,016	+				-0.0
4,335,016	+				+0.6
4,335,016	+				+2.6
4,335,017	-				+0.2
4,335,017	-				-1.9
4,335,033	+		PFLU_RS19165	0.11	-0.0
4,335,034	-		PFLU_RS19165	0.11	+0.2
4,335,133	-		PFLU_RS19165	0.19	+2.0
4,335,133	-		PFLU_RS19165	0.19	-1.4
4,335,234	-		PFLU_RS19165	0.27	-0.0
4,335,622	+		PFLU_RS19165	0.57	-0.4
4,335,622	+		PFLU_RS19165	0.57	-0.4
4,335,622	+		PFLU_RS19165	0.57	+1.6
4,335,622	+		PFLU_RS19165	0.57	+1.1
4,335,623	-		PFLU_RS19165	0.57	+1.1
4,335,623	-		PFLU_RS19165	0.57	-0.0
4,335,649	-		PFLU_RS19165	0.59	+1.6
4,335,649	-		PFLU_RS19165	0.59	-1.9
4,335,655	+		PFLU_RS19165	0.60	+1.6
4,335,656	-		PFLU_RS19165	0.60	-0.8
4,335,709	+		PFLU_RS19165	0.64	-1.2