Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS16315

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
3,701,026	-		PFLU_RS16300	0.67	-1.3
3,701,056	+		PFLU_RS16300	0.72	+0.7
3,701,057	-		PFLU_RS16300	0.73	-1.8
3,701,057	-		PFLU_RS16300	0.73	+0.1
3,701,092	+		PFLU_RS16300	0.79	+0.0
3,701,177	+				+0.9
3,701,206	-				-1.4
3,701,274	+		PFLU_RS16305	0.10	+0.8
3,701,274	+		PFLU_RS16305	0.10	+0.5
3,701,275	-		PFLU_RS16305	0.10	-0.3
3,701,275	-		PFLU_RS16305	0.10	-0.2
3,701,276	+		PFLU_RS16305	0.10	-1.0
3,701,276	+		PFLU_RS16305	0.10	+0.5
3,701,277	-		PFLU_RS16305	0.11	+0.2
3,701,322	+		PFLU_RS16305	0.22	+1.0
3,701,322	+		PFLU_RS16305	0.22	+1.0
3,701,322	+		PFLU_RS16305	0.22	-0.1
3,701,323	-		PFLU_RS16305	0.22	+0.0
3,701,331	+		PFLU_RS16305	0.24	+0.5
3,701,332	-		PFLU_RS16305	0.24	+0.5
3,701,367	+		PFLU_RS16305	0.33	+0.5
3,701,439	-		PFLU_RS16305	0.50	-1.0
3,701,439	-		PFLU_RS16305	0.50	-1.8
3,701,451	+		PFLU_RS16305	0.53	+1.4
3,701,451	+		PFLU_RS16305	0.53	+0.4
3,701,481	+		PFLU_RS16305	0.60	-1.1
3,701,482	-		PFLU_RS16305	0.61	+0.0
3,701,482	-		PFLU_RS16305	0.61	+1.2
3,701,486	+		PFLU_RS16305	0.62	-0.4
3,701,504	+		PFLU_RS16305	0.66	-1.6
3,701,509	-		PFLU_RS16305	0.67	-1.0
3,701,536	+		PFLU_RS16305	0.74	-1.7
3,701,537	-		PFLU_RS16305	0.74	-0.2
3,701,569	+		PFLU_RS16305	0.82	-0.4
3,701,569	+		PFLU_RS16305	0.82	+0.1
3,701,569	+		PFLU_RS16305	0.82	-0.4
3,701,569	+		PFLU_RS16305	0.82	-0.0
3,701,569	+		PFLU_RS16305	0.82	-0.3
3,701,569	+		PFLU_RS16305	0.82	-0.4
3,701,570	-		PFLU_RS16305	0.82	-0.0
3,701,570	-		PFLU_RS16305	0.82	-0.4
3,701,570	-		PFLU_RS16305	0.82	-0.1
3,701,570	-		PFLU_RS16305	0.82	+1.0
3,701,570	-		PFLU_RS16305	0.82	+1.4
3,701,570	-		PFLU_RS16305	0.82	+0.4
3,701,570	-		PFLU_RS16305	0.82	-0.3
3,701,570	-		PFLU_RS16305	0.82	+0.7
3,701,570	-		PFLU_RS16305	0.82	-1.8
3,701,570	-		PFLU_RS16305	0.82	+0.2
3,701,571	+		PFLU_RS16305	0.82	+0.0
3,701,571	+		PFLU_RS16305	0.82	-2.1
3,701,571	+		PFLU_RS16305	0.82	+1.5
3,701,571	+		PFLU_RS16305	0.82	+1.2
3,701,571	+		PFLU_RS16305	0.82	-1.1
3,701,571	+		PFLU_RS16305	0.82	-2.1
3,701,571	+		PFLU_RS16305	0.82	+0.3
3,701,572	-		PFLU_RS16305	0.82	+0.2
3,701,572	-		PFLU_RS16305	0.82	-0.8
3,701,572	-		PFLU_RS16305	0.82	-1.2
3,701,572	-		PFLU_RS16305	0.82	-0.4
3,701,572	-		PFLU_RS16305	0.82	+0.6
3,701,572	-		PFLU_RS16305	0.82	+1.2
3,701,572	-		PFLU_RS16305	0.82	-0.5
3,701,572	-		PFLU_RS16305	0.82	+0.5
3,701,575	+		PFLU_RS16305	0.83	-2.3
3,701,575	+		PFLU_RS16305	0.83	+1.6
3,701,575	+		PFLU_RS16305	0.83	-0.7
3,701,575	+		PFLU_RS16305	0.83	+0.1
3,701,575	+		PFLU_RS16305	0.83	+0.9
3,701,575	+		PFLU_RS16305	0.83	+0.5
3,701,575	+		PFLU_RS16305	0.83	-0.1
3,701,575	+		PFLU_RS16305	0.83	+1.0
3,701,575	+		PFLU_RS16305	0.83	-0.2
3,701,575	+		PFLU_RS16305	0.83	+0.8
3,701,576	-		PFLU_RS16305	0.83	+0.4
3,701,576	-		PFLU_RS16305	0.83	-0.2
3,701,576	-		PFLU_RS16305	0.83	-0.9
3,701,576	-		PFLU_RS16305	0.83	+0.7
3,701,576	-		PFLU_RS16305	0.83	-1.4
3,701,576	-		PFLU_RS16305	0.83	-0.5
3,701,576	-		PFLU_RS16305	0.83	+0.3
3,701,594	+		PFLU_RS16305	0.88	+0.6
3,701,594	+		PFLU_RS16305	0.88	+0.5
3,701,595	-		PFLU_RS16305	0.88	-2.5
3,701,595	-		PFLU_RS16305	0.88	-0.1
3,701,595	-		PFLU_RS16305	0.88	+0.2
3,701,641	+				-0.9
3,701,641	+				+1.4
3,701,641	+				+1.2
3,701,775	-		PFLU_RS16310	0.28	-0.4
3,701,830	+		PFLU_RS16310	0.45	+0.2
3,701,833	+		PFLU_RS16310	0.46	-0.1
3,701,833	+		PFLU_RS16310	0.46	+0.2
3,701,833	+		PFLU_RS16310	0.46	-1.0
3,701,833	+		PFLU_RS16310	0.46	+0.6
3,701,834	-		PFLU_RS16310	0.46	+1.2
3,701,873	-		PFLU_RS16310	0.58	+0.2
3,701,873	-		PFLU_RS16310	0.58	+0.2
3,701,873	-		PFLU_RS16310	0.58	+0.6
3,701,948	+		PFLU_RS16310	0.81	+0.2
3,701,949	-		PFLU_RS16310	0.82	-0.1
3,702,096	+		PFLU_RS16315	0.15	-0.1
3,702,111	-		PFLU_RS16315	0.17	+0.7
3,702,148	+		PFLU_RS16315	0.23	-1.3
3,702,238	+		PFLU_RS16315	0.39	-0.4
3,702,330	-		PFLU_RS16315	0.54	+0.3
3,702,351	+		PFLU_RS16315	0.58	-1.0
3,702,370	-		PFLU_RS16315	0.61	-0.6
3,702,372	+		PFLU_RS16315	0.61	-1.0
3,702,378	+		PFLU_RS16315	0.62	+2.8
3,702,496	-		PFLU_RS16315	0.82	+0.1
3,702,496	-		PFLU_RS16315	0.82	-1.1
3,702,497	+		PFLU_RS16315	0.82	+2.2
3,702,605	+				+0.0
3,702,622	-				+1.3
3,702,622	-				-0.6
3,702,678	+				+0.0
3,702,838	+		PFLU_RS16320	0.52	-0.8
3,702,839	-		PFLU_RS16320	0.53	+2.2
3,702,843	+		PFLU_RS16320	0.54	+1.0
3,702,843	+		PFLU_RS16320	0.54	+0.3
3,702,844	-		PFLU_RS16320	0.54	+0.8
3,702,844	-		PFLU_RS16320	0.54	+0.8
3,702,882	-		PFLU_RS16320	0.66	-0.7
3,702,926	+		PFLU_RS16320	0.79	-1.0
3,702,939	+		PFLU_RS16320	0.83	-0.5
3,702,940	-		PFLU_RS16320	0.83	+0.2
3,702,940	-		PFLU_RS16320	0.83	-0.1
3,702,941	+		PFLU_RS16320	0.84	+0.8
3,702,941	+		PFLU_RS16320	0.84	+0.4
3,702,941	+		PFLU_RS16320	0.84	+0.6
3,702,941	+		PFLU_RS16320	0.84	-0.4
3,702,941	+		PFLU_RS16320	0.84	+0.9
3,702,942	-		PFLU_RS16320	0.84	+0.5
3,702,942	-		PFLU_RS16320	0.84	+0.7
3,702,942	-		PFLU_RS16320	0.84	+0.3
3,702,952	-		PFLU_RS16320	0.87	-0.8
3,702,992	-				-0.1
3,702,992	-				-1.1
3,703,016	+				+1.2
3,703,016	+				+1.0
3,703,017	-				-1.1
3,703,017	-				+0.6
3,703,017	-				+0.8
3,703,017	-				-0.5
3,703,017	-				+0.6
3,703,017	-				+0.2
3,703,019	+				-2.1
3,703,019	+				-0.3
3,703,019	+				-0.7
3,703,019	+				-0.4
3,703,020	-				+0.2
3,703,020	-				+0.3
3,703,020	-				+0.6
3,703,022	+				+0.8
3,703,023	-				-3.1
3,703,023	-				+1.2
3,703,133	-		PFLU_RS16325	0.15	-0.8
3,703,148	+		PFLU_RS16325	0.16	-0.1
3,703,148	+		PFLU_RS16325	0.16	+0.5
3,703,148	+		PFLU_RS16325	0.16	-0.1
3,703,148	+		PFLU_RS16325	0.16	-1.0
3,703,148	+		PFLU_RS16325	0.16	-0.0
3,703,148	+		PFLU_RS16325	0.16	-0.2
3,703,148	+		PFLU_RS16325	0.16	+1.1
3,703,148	+		PFLU_RS16325	0.16	+1.9
3,703,148	+		PFLU_RS16325	0.16	+1.0
3,703,148	+		PFLU_RS16325	0.16	+0.4
3,703,148	+		PFLU_RS16325	0.16	+0.4
3,703,148	+		PFLU_RS16325	0.16	-1.1
3,703,148	+		PFLU_RS16325	0.16	+0.0
3,703,148	+		PFLU_RS16325	0.16	+0.1
3,703,148	+		PFLU_RS16325	0.16	-0.8
3,703,148	+		PFLU_RS16325	0.16	-0.5
3,703,149	-		PFLU_RS16325	0.16	-1.0
3,703,149	-		PFLU_RS16325	0.16	+0.5
3,703,149	-		PFLU_RS16325	0.16	-0.4
3,703,149	-		PFLU_RS16325	0.16	+0.6
3,703,149	-		PFLU_RS16325	0.16	+1.3
3,703,149	-		PFLU_RS16325	0.16	-1.3
3,703,149	-		PFLU_RS16325	0.16	+1.5
3,703,149	-		PFLU_RS16325	0.16	+0.5
3,703,152	+		PFLU_RS16325	0.17	+3.2
3,703,152	+		PFLU_RS16325	0.17	-0.6
3,703,152	+		PFLU_RS16325	0.17	+0.3
3,703,152	+		PFLU_RS16325	0.17	+0.8
3,703,152	+		PFLU_RS16325	0.17	-0.1
3,703,152	+		PFLU_RS16325	0.17	+0.5
3,703,153	-		PFLU_RS16325	0.17	+0.1
3,703,153	-		PFLU_RS16325	0.17	-1.1
3,703,153	-		PFLU_RS16325	0.17	-0.2
3,703,153	-		PFLU_RS16325	0.17	+0.1
3,703,153	-		PFLU_RS16325	0.17	-0.2
3,703,153	-		PFLU_RS16325	0.17	+0.6
3,703,153	-		PFLU_RS16325	0.17	-0.7
3,703,233	+		PFLU_RS16325	0.25	+1.2
3,703,233	+		PFLU_RS16325	0.25	-1.3
3,703,234	-		PFLU_RS16325	0.25	-0.2
3,703,234	-		PFLU_RS16325	0.25	-0.2
3,703,281	+		PFLU_RS16325	0.29	-0.1
3,703,281	+		PFLU_RS16325	0.29	+0.5
3,703,281	+		PFLU_RS16325	0.29	-0.1
3,703,281	+		PFLU_RS16325	0.29	+0.2
3,703,281	+		PFLU_RS16325	0.29	-2.4
3,703,281	+		PFLU_RS16325	0.29	+2.3
3,703,282	-		PFLU_RS16325	0.29	-0.2
3,703,282	-		PFLU_RS16325	0.29	+0.7
3,703,282	-		PFLU_RS16325	0.29	-1.1
3,703,284	+		PFLU_RS16325	0.30	+0.5
3,703,284	+		PFLU_RS16325	0.30	+0.7
3,703,285	-		PFLU_RS16325	0.30	+0.6
3,703,285	-		PFLU_RS16325	0.30	+0.2
3,703,293	-		PFLU_RS16325	0.31	-0.5
3,703,303	+		PFLU_RS16325	0.32	+0.2
3,703,303	+		PFLU_RS16325	0.32	-0.8
3,703,304	-		PFLU_RS16325	0.32	-0.8
3,703,304	-		PFLU_RS16325	0.32	+0.2
3,703,440	-		PFLU_RS16325	0.45	+0.2
3,703,440	-		PFLU_RS16325	0.45	+0.2
3,703,442	+		PFLU_RS16325	0.45	+1.0
3,703,442	+		PFLU_RS16325	0.45	-2.3
3,703,443	-		PFLU_RS16325	0.45	-0.2
3,703,443	-		PFLU_RS16325	0.45	-0.4
3,703,443	-		PFLU_RS16325	0.45	-0.9
3,703,473	-		PFLU_RS16325	0.48	-0.0
3,703,473	-		PFLU_RS16325	0.48	+1.2
3,703,517	+		PFLU_RS16325	0.53	+0.1
3,703,518	-		PFLU_RS16325	0.53	-0.3