Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07440

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
1,655,266	+		PFLU_RS07435	0.26	-0.2
1,655,267	-		PFLU_RS07435	0.26	-0.5
1,655,332	+		PFLU_RS07435	0.31	-0.3
1,655,428	+		PFLU_RS07435	0.39	-0.2
1,655,428	+		PFLU_RS07435	0.39	-2.6
1,655,428	+		PFLU_RS07435	0.39	-1.7
1,655,429	-		PFLU_RS07435	0.39	+0.4
1,655,509	+		PFLU_RS07435	0.46	-0.8
1,655,510	-		PFLU_RS07435	0.46	+0.2
1,655,510	-		PFLU_RS07435	0.46	+1.9
1,655,510	-		PFLU_RS07435	0.46	-0.1
1,655,541	+		PFLU_RS07435	0.49	+0.1
1,655,541	+		PFLU_RS07435	0.49	+0.1
1,655,569	+		PFLU_RS07435	0.51	+0.9
1,655,569	+		PFLU_RS07435	0.51	+0.2
1,655,569	+		PFLU_RS07435	0.51	+0.7
1,655,570	-		PFLU_RS07435	0.51	-1.3
1,655,629	+		PFLU_RS07435	0.56	-1.3
1,655,630	-		PFLU_RS07435	0.56	+0.1
1,655,632	+		PFLU_RS07435	0.56	-0.8
1,655,633	+		PFLU_RS07435	0.56	+1.1
1,655,633	-		PFLU_RS07435	0.56	+1.6
1,655,633	-		PFLU_RS07435	0.56	+0.0
1,655,633	-		PFLU_RS07435	0.56	-0.1
1,655,633	-		PFLU_RS07435	0.56	-0.3
1,655,633	-		PFLU_RS07435	0.56	+0.6
1,655,633	-		PFLU_RS07435	0.56	-2.3
1,655,633	-		PFLU_RS07435	0.56	+0.8
1,655,633	-		PFLU_RS07435	0.56	-0.2
1,655,633	-		PFLU_RS07435	0.56	-0.6
1,655,800	+		PFLU_RS07435	0.70	-1.2
1,655,896	+		PFLU_RS07435	0.78	-0.1
1,655,950	+		PFLU_RS07435	0.83	-0.2
1,655,950	+		PFLU_RS07435	0.83	-2.2
1,656,046	-				+0.8
1,656,076	+				-0.3
1,656,076	+				-1.4
1,656,076	+				-1.0
1,656,077	-				-2.4
1,656,077	-				-0.9
1,656,077	-				+0.3
1,656,077	-				+0.5
1,656,077	-				+1.3
1,656,077	-				-0.6
1,656,077	-				+0.0
1,656,122	-				+0.9
1,656,395	-		PFLU_RS07440	0.12	-1.2
1,656,395	-		PFLU_RS07440	0.12	-2.0
1,656,395	-		PFLU_RS07440	0.12	-0.7
1,656,395	-		PFLU_RS07440	0.12	-1.4
1,656,395	-		PFLU_RS07440	0.12	-0.8
1,656,395	-		PFLU_RS07440	0.12	+0.6
1,656,395	-		PFLU_RS07440	0.12	+0.4
1,656,395	-		PFLU_RS07440	0.12	+1.1
1,656,427	+		PFLU_RS07440	0.14	-0.0
1,656,427	+		PFLU_RS07440	0.14	+1.8
1,656,427	+		PFLU_RS07440	0.14	-0.1
1,656,428	-		PFLU_RS07440	0.14	+0.6
1,656,428	-		PFLU_RS07440	0.14	+2.2
1,656,448	+		PFLU_RS07440	0.15	+0.8
1,656,647	-		PFLU_RS07440	0.28	-0.3
1,656,647	-		PFLU_RS07440	0.28	-0.6
1,656,647	-		PFLU_RS07440	0.28	-0.9
1,656,661	+		PFLU_RS07440	0.29	+0.8
1,656,661	+		PFLU_RS07440	0.29	+0.2
1,656,661	+		PFLU_RS07440	0.29	-0.4
1,656,661	+		PFLU_RS07440	0.29	-0.5
1,656,661	+		PFLU_RS07440	0.29	-2.6
1,656,661	+		PFLU_RS07440	0.29	-1.9
1,656,661	+		PFLU_RS07440	0.29	+1.4
1,656,661	+		PFLU_RS07440	0.29	+1.1
1,656,662	-		PFLU_RS07440	0.29	+0.2
1,656,662	-		PFLU_RS07440	0.29	+0.3
1,656,662	-		PFLU_RS07440	0.29	-1.3
1,656,662	-		PFLU_RS07440	0.29	-0.9
1,656,662	-		PFLU_RS07440	0.29	+0.4
1,656,700	+		PFLU_RS07440	0.32	+0.4
1,656,701	-		PFLU_RS07440	0.32	-0.0
1,656,701	-		PFLU_RS07440	0.32	+1.6
1,656,701	-		PFLU_RS07440	0.32	+1.3
1,656,701	-		PFLU_RS07440	0.32	+1.8
1,656,712	+		PFLU_RS07440	0.32	+0.8
1,656,712	+		PFLU_RS07440	0.32	+0.2
1,656,713	-		PFLU_RS07440	0.32	-0.2
1,656,746	+		PFLU_RS07440	0.35	-0.4
1,656,746	+		PFLU_RS07440	0.35	-0.1
1,656,747	-		PFLU_RS07440	0.35	-1.4
1,656,747	-		PFLU_RS07440	0.35	-0.1
1,656,747	-		PFLU_RS07440	0.35	-0.9
1,656,769	+		PFLU_RS07440	0.36	-2.4
1,656,769	+		PFLU_RS07440	0.36	-0.8
1,656,769	+		PFLU_RS07440	0.36	-0.2
1,656,770	-		PFLU_RS07440	0.36	+1.4
1,656,770	-		PFLU_RS07440	0.36	+0.5
1,656,770	-		PFLU_RS07440	0.36	-0.5
1,656,770	-		PFLU_RS07440	0.36	-0.9
1,656,829	+		PFLU_RS07440	0.40	+0.4
1,656,830	-		PFLU_RS07440	0.40	-0.7
1,657,186	+		PFLU_RS07440	0.64	+0.8
1,657,187	-		PFLU_RS07440	0.64	-0.1
1,657,222	+		PFLU_RS07440	0.66	-0.2
1,657,222	+		PFLU_RS07440	0.66	+0.3
1,657,222	+		PFLU_RS07440	0.66	+0.3
1,657,222	+		PFLU_RS07440	0.66	-0.0
1,657,222	+		PFLU_RS07440	0.66	+0.9
1,657,223	-		PFLU_RS07440	0.66	-0.7
1,657,223	-		PFLU_RS07440	0.66	-1.1
1,657,223	-		PFLU_RS07440	0.66	+0.8
1,657,223	-		PFLU_RS07440	0.66	-0.1
1,657,224	+		PFLU_RS07440	0.66	+0.4
1,657,224	+		PFLU_RS07440	0.66	+0.4
1,657,224	+		PFLU_RS07440	0.66	+2.8
1,657,224	+		PFLU_RS07440	0.66	+0.7
1,657,224	+		PFLU_RS07440	0.66	+0.2
1,657,224	+		PFLU_RS07440	0.66	-0.6
1,657,225	-		PFLU_RS07440	0.66	+2.4
1,657,370	+		PFLU_RS07440	0.76	-1.4
1,657,370	+		PFLU_RS07440	0.76	+0.5
1,657,430	+		PFLU_RS07440	0.80	+0.2
1,657,430	+		PFLU_RS07440	0.80	-0.0
1,657,430	+		PFLU_RS07440	0.80	-2.0
1,657,430	+		PFLU_RS07440	0.80	+0.1
1,657,431	-		PFLU_RS07440	0.80	+0.3
1,657,431	-		PFLU_RS07440	0.80	+0.7
1,657,431	-		PFLU_RS07440	0.80	-0.1
1,657,431	-		PFLU_RS07440	0.80	-1.0
1,657,431	-		PFLU_RS07440	0.80	+0.2
1,657,431	-		PFLU_RS07440	0.80	+1.1
1,657,431	-		PFLU_RS07440	0.80	-0.4
1,657,431	-		PFLU_RS07440	0.80	+0.0
1,657,431	-		PFLU_RS07440	0.80	+0.8
1,657,482	-		PFLU_RS07440	0.83	-0.6
1,657,559	+		PFLU_RS07440	0.88	+0.9
1,657,559	+		PFLU_RS07440	0.88	+0.2
1,657,559	+		PFLU_RS07440	0.88	-0.1
1,657,560	-		PFLU_RS07440	0.88	+0.2
1,657,560	-		PFLU_RS07440	0.88	-0.0
1,657,560	-		PFLU_RS07440	0.88	+0.9
1,657,735	+				+0.1
1,657,736	-				-0.4
1,657,756	+				+0.5
1,657,756	+				+1.0
1,657,757	-				+0.2
1,657,757	-				+1.2
1,657,757	-				+0.5
1,657,757	-				-0.1
1,657,757	-				-0.3
1,657,757	-				-0.3
1,657,757	-				+0.6
1,657,760	+				+0.3
1,657,760	+				+1.7
1,657,760	+				-0.8
1,657,760	+				-1.4
1,657,760	+				-0.6
1,657,760	+				+0.5
1,657,761	-				-1.4
1,657,761	-				-1.4
1,657,761	-				-0.7
1,657,761	-				+0.9
1,657,761	-				+0.6
1,657,761	-				+1.4
1,657,761	-				-0.5
1,657,761	-				-0.6
1,657,772	+				+1.2
1,657,772	+				-0.1
1,657,772	+				-0.5
1,657,773	-				+0.6
1,658,100	+		PFLU_RS31455	0.61	+0.3
1,658,100	+		PFLU_RS31455	0.61	-0.3
1,658,100	+		PFLU_RS31455	0.61	-0.6
1,658,104	+		PFLU_RS31455	0.63	-0.2
1,658,104	+		PFLU_RS31455	0.63	-0.4
1,658,104	+		PFLU_RS31455	0.63	-0.7
1,658,104	+		PFLU_RS31455	0.63	+0.1
1,658,104	+		PFLU_RS31455	0.63	-0.6
1,658,104	+		PFLU_RS31455	0.63	+0.3
1,658,104	+		PFLU_RS31455	0.63	-0.7
1,658,104	+		PFLU_RS31455	0.63	-0.6
1,658,104	+		PFLU_RS31455	0.63	+0.5
1,658,104	+		PFLU_RS31455	0.63	-0.4
1,658,104	+		PFLU_RS31455	0.63	-2.1
1,658,104	+		PFLU_RS31455	0.63	+1.4
1,658,104	+		PFLU_RS31455	0.63	+0.4
1,658,104	+		PFLU_RS31455	0.63	-0.7
1,658,104	+		PFLU_RS31455	0.63	-1.3
1,658,104	+		PFLU_RS31455	0.63	-0.2
1,658,104	+		PFLU_RS31455	0.63	-0.0
1,658,104	+		PFLU_RS31455	0.63	-1.0
1,658,104	+		PFLU_RS31455	0.63	-0.5
1,658,239	+				+0.4
1,658,239	+				+1.1
1,658,239	+				-0.5
1,658,239	+				-0.8
1,658,239	+				-0.3
1,658,239	+				-0.0
1,658,240	-				+0.4
1,658,240	-				-0.5
1,658,240	-				-1.8
1,658,240	-				-0.3
1,658,240	-				-1.6
1,658,240	-				+0.6
1,658,240	-				-0.0
1,658,240	-				-1.2
1,658,264	+				+0.9
1,658,264	+				+1.2
1,658,264	+				+0.7
1,658,264	+				-2.0
1,658,264	+				-1.1
1,658,264	+				+0.6
1,658,264	+				-1.5
1,658,265	-				+0.3
1,658,265	-				-0.3
1,658,265	-				-0.9
1,658,265	-				-1.7
1,658,265	-				-2.4
1,658,265	-				-0.9
1,658,265	-				+1.2
1,658,267	+				-1.9
1,658,268	-				+0.1
1,658,268	-				+0.1
1,658,283	+				+0.5
1,658,284	-				+0.6
1,658,284	-				+0.3
1,658,284	-				-0.2
1,658,284	-				-1.3
1,658,306	+				+0.3
1,658,306	+				+0.6
1,658,306	+				+0.6
1,658,306	+				+0.3
1,658,306	+				-1.4
1,658,306	+				-1.3
1,658,306	+				+1.8
1,658,306	+				-0.8
1,658,306	+				-0.2
1,658,306	+				+1.7
1,658,306	+				-0.2
1,658,306	+				+0.2
1,658,306	+				+1.0
1,658,306	+				+0.1
1,658,306	+				+0.4
1,658,306	+				-0.1
1,658,306	+				+0.8
1,658,306	+				+1.4
1,658,306	+				-0.3
1,658,306	+				-0.1
1,658,306	+				-0.7
1,658,306	+				-0.0
1,658,306	+				-0.3
1,658,306	+				+0.8
1,658,306	+				-2.1
1,658,306	+				-0.8
1,658,306	+				+0.2
1,658,306	+				+1.2
1,658,306	+				+0.2
1,658,306	+				-0.5
1,658,306	+				-0.8
1,658,306	+				-0.6
1,658,306	+				+0.7
1,658,306	+				-0.5
1,658,306	+				-0.8
1,658,306	+				+0.1
1,658,306	+				+0.4
1,658,306	+				-0.2
1,658,306	+				+1.3
1,658,306	+				+0.8
1,658,306	+				-1.1
1,658,306	+				-0.6
1,658,306	+				-0.2
1,658,307	-				-0.2
1,658,307	-				+0.7
1,658,307	-				-0.9
1,658,307	-				-0.0
1,658,307	-				+0.1
1,658,307	-				+0.6
1,658,307	-				-0.2
1,658,307	-				-0.4
1,658,307	-				-1.4
1,658,307	-				+0.4
1,658,307	-				-0.7
1,658,307	-				+0.4
1,658,307	-				-0.0
1,658,307	-				-2.0
1,658,307	-				+0.2
1,658,307	-				-1.8
1,658,307	-				+0.8
1,658,307	-				+0.6
1,658,307	-				+0.2
1,658,307	-				+1.0
1,658,307	-				+0.8
1,658,307	-				+0.3
1,658,307	-				-0.4
1,658,307	-				+0.2
1,658,307	-				-0.3
1,658,307	-				-1.0
1,658,316	+				+0.7
1,658,316	+				+0.5
1,658,317	-				-0.1
1,658,317	-				+0.5
1,658,317	-				-1.1
1,658,317	-				+0.7
1,658,354	+		PFLU_RS07445	0.12	-0.2
1,658,354	+		PFLU_RS07445	0.12	+0.5
1,658,355	-		PFLU_RS07445	0.12	+0.6
1,658,355	-		PFLU_RS07445	0.12	+0.7
1,658,355	-		PFLU_RS07445	0.12	-0.3
1,658,360	+		PFLU_RS07445	0.13	-1.7
1,658,360	+		PFLU_RS07445	0.13	-1.0
1,658,361	-		PFLU_RS07445	0.13	+0.8
1,658,361	-		PFLU_RS07445	0.13	+0.4
1,658,361	-		PFLU_RS07445	0.13	-0.3
1,658,361	-		PFLU_RS07445	0.13	-0.6
1,658,361	-		PFLU_RS07445	0.13	-0.1
1,658,361	-		PFLU_RS07445	0.13	-0.6
1,658,361	-		PFLU_RS07445	0.13	-0.9
1,658,361	-		PFLU_RS07445	0.13	+0.5
1,658,361	-		PFLU_RS07445	0.13	+0.1
1,658,361	-		PFLU_RS07445	0.13	-0.4
1,658,361	-		PFLU_RS07445	0.13	-2.6
1,658,361	-		PFLU_RS07445	0.13	-0.9
1,658,448	+		PFLU_RS07445	0.23	-0.1
1,658,448	+		PFLU_RS07445	0.23	-0.9
1,658,448	+		PFLU_RS07445	0.23	-1.4
1,658,449	-		PFLU_RS07445	0.23	-0.4
1,658,449	-		PFLU_RS07445	0.23	-0.3
1,658,449	-		PFLU_RS07445	0.23	-0.6
1,658,449	-		PFLU_RS07445	0.23	-0.6
1,658,466	+		PFLU_RS07445	0.25	+0.2
1,658,483	+		PFLU_RS07445	0.27	-0.4
1,658,483	+		PFLU_RS07445	0.27	-1.0
1,658,483	+		PFLU_RS07445	0.27	-0.9
1,658,483	+		PFLU_RS07445	0.27	+0.5
1,658,483	+		PFLU_RS07445	0.27	-0.0
1,658,483	+		PFLU_RS07445	0.27	+0.1
1,658,483	+		PFLU_RS07445	0.27	-1.3
1,658,483	+		PFLU_RS07445	0.27	+1.2
1,658,483	+		PFLU_RS07445	0.27	-0.4
1,658,484	-		PFLU_RS07445	0.27	+0.5
1,658,484	-		PFLU_RS07445	0.27	+0.5
1,658,484	-		PFLU_RS07445	0.27	-0.4
1,658,484	-		PFLU_RS07445	0.27	+1.1
1,658,484	-		PFLU_RS07445	0.27	+0.3
1,658,484	-		PFLU_RS07445	0.27	+0.6
1,658,516	+		PFLU_RS07445	0.31	+1.3
1,658,516	+		PFLU_RS07445	0.31	-0.1
1,658,516	+		PFLU_RS07445	0.31	+0.3
1,658,516	+		PFLU_RS07445	0.31	+1.1
1,658,516	+		PFLU_RS07445	0.31	-0.1
1,658,516	+		PFLU_RS07445	0.31	-0.5
1,658,516	+		PFLU_RS07445	0.31	+0.7
1,658,516	+		PFLU_RS07445	0.31	-1.4
1,658,516	+		PFLU_RS07445	0.31	+1.0
1,658,516	+		PFLU_RS07445	0.31	+0.3
1,658,516	+		PFLU_RS07445	0.31	-0.9
1,658,516	+		PFLU_RS07445	0.31	+0.5
1,658,516	+		PFLU_RS07445	0.31	-0.0
1,658,516	+		PFLU_RS07445	0.31	-0.9
1,658,516	+		PFLU_RS07445	0.31	+0.2
1,658,516	+		PFLU_RS07445	0.31	-0.4
1,658,516	+		PFLU_RS07445	0.31	-0.9
1,658,516	+		PFLU_RS07445	0.31	+0.4
1,658,516	+		PFLU_RS07445	0.31	+1.3
1,658,516	+		PFLU_RS07445	0.31	+0.6
1,658,517	-		PFLU_RS07445	0.31	+0.9
1,658,517	-		PFLU_RS07445	0.31	-0.3
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1,658,517	-		PFLU_RS07445	0.31	+1.4
1,658,517	-		PFLU_RS07445	0.31	-1.7
1,658,517	-		PFLU_RS07445	0.31	+0.2
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1,658,517	-		PFLU_RS07445	0.31	+0.9
1,658,517	-		PFLU_RS07445	0.31	+0.6
1,658,517	-		PFLU_RS07445	0.31	+1.3
1,658,517	-		PFLU_RS07445	0.31	+0.0
1,658,517	-		PFLU_RS07445	0.31	-0.4
1,658,517	-		PFLU_RS07445	0.31	+0.6
1,658,553	+		PFLU_RS07445	0.36	+1.1
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1,658,554	-		PFLU_RS07445	0.36	+0.3
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1,658,700	+		PFLU_RS07445	0.53	+0.2
1,658,700	+		PFLU_RS07445	0.53	+0.8
1,658,700	+		PFLU_RS07445	0.53	+0.7