Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06335

Experiment: Trisodium citrate (C); with MOPS

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPFLU_RS06325 and PFLU_RS06330 are separated by 111 nucleotidesPFLU_RS06330 and PFLU_RS06335 overlap by 4 nucleotidesPFLU_RS06335 and PFLU_RS06340 are separated by 2 nucleotides PFLU_RS06325: PFLU_RS06325 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 1,416,638 to 1,417,693 _RS06325 PFLU_RS06330: PFLU_RS06330 - 3-hydroxyacyl-ACP dehydratase FabZ, at 1,417,805 to 1,418,245 _RS06330 PFLU_RS06335: PFLU_RS06335 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 1,418,242 to 1,419,018 _RS06335 PFLU_RS06340: PFLU_RS06340 - lipid-A-disaccharide synthase, at 1,419,021 to 1,420,160 _RS06340 Position (kb) 1418 1419 1420Strain fitness (log2 ratio) -1 0 1at 1417.762 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Trisodium citrate (C); with MOPS
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1,417,762 + -0.6

Or see this region's nucleotide sequence