Strain Fitness in Pseudomonas sp. S08-1 around OH686_21095

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_21090 and OH686_21095 overlap by 11 nucleotidesOH686_21095 and OH686_21100 are separated by 135 nucleotides OH686_21090: OH686_21090 - Fumarylacetoacetase , at 4,318,263 to 4,319,246 _21090 OH686_21095: OH686_21095 - maleylacetoacetate isomerase, at 4,319,236 to 4,319,898 _21095 OH686_21100: OH686_21100 - Putative nitrite reductase, at 4,320,034 to 4,321,287 _21100 Position (kb) 4319 4320Strain fitness (log2 ratio) -3 -2 -1 0 1at 4318.247 kb on + strandat 4318.247 kb on + strandat 4318.247 kb on + strandat 4318.247 kb on + strandat 4318.247 kb on + strandat 4318.247 kb on + strandat 4318.248 kb on - strandat 4318.248 kb on - strandat 4318.248 kb on - strandat 4318.248 kb on - strandat 4318.248 kb on - strandat 4318.248 kb on - strandat 4318.248 kb on - strandat 4318.248 kb on - strandat 4318.248 kb on - strandat 4318.599 kb on + strand, within OH686_21090at 4318.599 kb on + strand, within OH686_21090at 4318.824 kb on + strand, within OH686_21090at 4318.825 kb on - strand, within OH686_21090at 4318.928 kb on + strand, within OH686_21090at 4319.235 kb on + strandat 4319.235 kb on + strandat 4319.235 kb on + strandat 4319.235 kb on + strandat 4319.235 kb on + strandat 4319.236 kb on - strandat 4319.236 kb on - strandat 4319.236 kb on - strandat 4319.236 kb on - strandat 4319.236 kb on - strandat 4319.258 kb on - strandat 4319.381 kb on - strand, within OH686_21095at 4319.474 kb on - strand, within OH686_21095at 4319.602 kb on + strand, within OH686_21095at 4319.603 kb on - strand, within OH686_21095at 4319.618 kb on + strand, within OH686_21095at 4319.618 kb on + strand, within OH686_21095at 4319.618 kb on + strand, within OH686_21095at 4319.618 kb on + strand, within OH686_21095at 4319.619 kb on - strand, within OH686_21095at 4319.619 kb on - strand, within OH686_21095at 4319.619 kb on - strand, within OH686_21095at 4319.619 kb on - strand, within OH686_21095at 4319.770 kb on + strand, within OH686_21095at 4319.771 kb on - strand, within OH686_21095at 4319.771 kb on - strand, within OH686_21095at 4319.771 kb on - strand, within OH686_21095at 4319.771 kb on - strand, within OH686_21095at 4319.771 kb on - strand, within OH686_21095at 4319.846 kb on + strandat 4319.846 kb on + strandat 4319.846 kb on + strandat 4319.847 kb on - strandat 4319.847 kb on - strandat 4319.847 kb on - strandat 4319.950 kb on + strandat 4319.950 kb on + strandat 4319.950 kb on + strandat 4319.950 kb on + strandat 4319.951 kb on - strandat 4319.951 kb on - strandat 4319.951 kb on - strandat 4319.951 kb on - strandat 4319.951 kb on - strandat 4319.951 kb on - strandat 4319.993 kb on + strandat 4319.993 kb on + strandat 4319.993 kb on + strandat 4319.993 kb on + strandat 4319.993 kb on + strandat 4319.994 kb on - strandat 4319.994 kb on - strandat 4319.994 kb on - strandat 4320.006 kb on - strandat 4320.033 kb on + strandat 4320.033 kb on + strandat 4320.033 kb on + strandat 4320.033 kb on + strandat 4320.033 kb on + strandat 4320.034 kb on - strandat 4320.034 kb on - strandat 4320.034 kb on - strandat 4320.034 kb on - strandat 4320.065 kb on + strandat 4320.066 kb on - strandat 4320.066 kb on - strandat 4320.159 kb on + strandat 4320.159 kb on + strandat 4320.159 kb on + strandat 4320.159 kb on + strandat 4320.159 kb on + strandat 4320.159 kb on + strandat 4320.160 kb on - strand, within OH686_21100at 4320.160 kb on - strand, within OH686_21100at 4320.160 kb on - strand, within OH686_21100at 4320.160 kb on - strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.235 kb on + strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.236 kb on - strand, within OH686_21100at 4320.241 kb on + strand, within OH686_21100at 4320.241 kb on + strand, within OH686_21100at 4320.241 kb on + strand, within OH686_21100at 4320.241 kb on + strand, within OH686_21100at 4320.242 kb on - strand, within OH686_21100at 4320.242 kb on - strand, within OH686_21100at 4320.242 kb on - strand, within OH686_21100at 4320.242 kb on - strand, within OH686_21100at 4320.242 kb on - strand, within OH686_21100at 4320.293 kb on + strand, within OH686_21100at 4320.293 kb on + strand, within OH686_21100at 4320.293 kb on + strand, within OH686_21100at 4320.293 kb on + strand, within OH686_21100at 4320.293 kb on + strand, within OH686_21100at 4320.294 kb on - strand, within OH686_21100at 4320.294 kb on - strand, within OH686_21100at 4320.294 kb on - strand, within OH686_21100at 4320.294 kb on - strand, within OH686_21100at 4320.294 kb on - strand, within OH686_21100at 4320.294 kb on - strand, within OH686_21100at 4320.488 kb on + strand, within OH686_21100at 4320.488 kb on + strand, within OH686_21100at 4320.488 kb on + strand, within OH686_21100at 4320.488 kb on + strand, within OH686_21100at 4320.488 kb on + strand, within OH686_21100at 4320.489 kb on - strand, within OH686_21100at 4320.489 kb on - strand, within OH686_21100at 4320.537 kb on + strand, within OH686_21100at 4320.537 kb on + strand, within OH686_21100at 4320.538 kb on - strand, within OH686_21100at 4320.538 kb on - strand, within OH686_21100at 4320.538 kb on - strand, within OH686_21100at 4320.565 kb on + strand, within OH686_21100at 4320.565 kb on + strand, within OH686_21100at 4320.565 kb on + strand, within OH686_21100at 4320.565 kb on + strand, within OH686_21100at 4320.565 kb on + strand, within OH686_21100at 4320.566 kb on - strand, within OH686_21100at 4320.613 kb on - strand, within OH686_21100at 4320.727 kb on + strand, within OH686_21100at 4320.727 kb on + strand, within OH686_21100at 4320.728 kb on - strand, within OH686_21100at 4320.728 kb on - strand, within OH686_21100at 4320.728 kb on - strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.817 kb on + strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.818 kb on - strand, within OH686_21100at 4320.823 kb on + strand, within OH686_21100at 4320.823 kb on + strand, within OH686_21100at 4320.824 kb on - strand, within OH686_21100at 4320.824 kb on - strand, within OH686_21100at 4320.862 kb on + strand, within OH686_21100at 4320.862 kb on + strand, within OH686_21100at 4320.862 kb on + strand, within OH686_21100at 4320.862 kb on + strand, within OH686_21100at 4320.862 kb on + strand, within OH686_21100at 4320.862 kb on + strand, within OH686_21100at 4320.863 kb on - strand, within OH686_21100at 4320.863 kb on - strand, within OH686_21100at 4320.863 kb on - strand, within OH686_21100

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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4,318,247 + -0.4
4,318,247 + +0.3
4,318,247 + -2.1
4,318,247 + -0.9
4,318,247 + -0.4
4,318,247 + -0.9
4,318,248 - +0.4
4,318,248 - +0.4
4,318,248 - +0.1
4,318,248 - +0.6
4,318,248 - -0.3
4,318,248 - -0.2
4,318,248 - +0.3
4,318,248 - +0.5
4,318,248 - +0.4
4,318,599 + OH686_21090 0.34 -0.4
4,318,599 + OH686_21090 0.34 -0.1
4,318,824 + OH686_21090 0.57 -1.1
4,318,825 - OH686_21090 0.57 -0.1
4,318,928 + OH686_21090 0.68 +0.9
4,319,235 + +0.7
4,319,235 + -0.4
4,319,235 + -0.5
4,319,235 + -0.0
4,319,235 + +1.0
4,319,236 - -0.8
4,319,236 - -1.2
4,319,236 - -0.6
4,319,236 - +0.4
4,319,236 - -0.1
4,319,258 - -1.9
4,319,381 - OH686_21095 0.22 +0.2
4,319,474 - OH686_21095 0.36 -1.5
4,319,602 + OH686_21095 0.55 -1.2
4,319,603 - OH686_21095 0.55 -0.1
4,319,618 + OH686_21095 0.58 -1.4
4,319,618 + OH686_21095 0.58 +0.5
4,319,618 + OH686_21095 0.58 -0.1
4,319,618 + OH686_21095 0.58 -0.1
4,319,619 - OH686_21095 0.58 -2.1
4,319,619 - OH686_21095 0.58 -0.4
4,319,619 - OH686_21095 0.58 -2.2
4,319,619 - OH686_21095 0.58 -1.7
4,319,770 + OH686_21095 0.81 -1.4
4,319,771 - OH686_21095 0.81 -0.4
4,319,771 - OH686_21095 0.81 -0.4
4,319,771 - OH686_21095 0.81 +0.0
4,319,771 - OH686_21095 0.81 -0.4
4,319,771 - OH686_21095 0.81 -0.4
4,319,846 + -3.2
4,319,846 + -0.4
4,319,846 + -1.2
4,319,847 - -0.4
4,319,847 - -1.3
4,319,847 - -1.1
4,319,950 + -1.1
4,319,950 + -0.9
4,319,950 + +0.8
4,319,950 + +1.2
4,319,951 - -0.4
4,319,951 - +0.2
4,319,951 - -0.2
4,319,951 - -0.4
4,319,951 - +0.5
4,319,951 - +0.5
4,319,993 + -0.5
4,319,993 + +0.0
4,319,993 + +0.3
4,319,993 + -0.3
4,319,993 + -0.3
4,319,994 - -0.4
4,319,994 - +0.8
4,319,994 - +0.2
4,320,006 - -0.6
4,320,033 + -0.1
4,320,033 + +0.8
4,320,033 + +0.5
4,320,033 + -1.0
4,320,033 + -0.1
4,320,034 - +0.8
4,320,034 - +0.2
4,320,034 - -0.1
4,320,034 - +0.3
4,320,065 + +0.4
4,320,066 - -0.5
4,320,066 - -0.9
4,320,159 + -0.3
4,320,159 + +0.1
4,320,159 + +0.5
4,320,159 + -2.3
4,320,159 + -0.2
4,320,159 + +0.5
4,320,160 - OH686_21100 0.10 -0.6
4,320,160 - OH686_21100 0.10 +1.6
4,320,160 - OH686_21100 0.10 -1.4
4,320,160 - OH686_21100 0.10 +0.1
4,320,235 + OH686_21100 0.16 -1.4
4,320,235 + OH686_21100 0.16 -0.3
4,320,235 + OH686_21100 0.16 -0.1
4,320,235 + OH686_21100 0.16 +0.9
4,320,235 + OH686_21100 0.16 +0.4
4,320,235 + OH686_21100 0.16 +0.2
4,320,235 + OH686_21100 0.16 +0.9
4,320,235 + OH686_21100 0.16 -1.5
4,320,235 + OH686_21100 0.16 -0.0
4,320,235 + OH686_21100 0.16 -0.2
4,320,235 + OH686_21100 0.16 +0.0
4,320,236 - OH686_21100 0.16 +0.3
4,320,236 - OH686_21100 0.16 -0.1
4,320,236 - OH686_21100 0.16 -0.9
4,320,236 - OH686_21100 0.16 -0.1
4,320,236 - OH686_21100 0.16 +0.1
4,320,236 - OH686_21100 0.16 -0.5
4,320,236 - OH686_21100 0.16 -1.0
4,320,236 - OH686_21100 0.16 +1.2
4,320,236 - OH686_21100 0.16 +0.8
4,320,236 - OH686_21100 0.16 +1.4
4,320,236 - OH686_21100 0.16 +0.6
4,320,241 + OH686_21100 0.17 -0.4
4,320,241 + OH686_21100 0.17 -0.2
4,320,241 + OH686_21100 0.17 -0.2
4,320,241 + OH686_21100 0.17 +0.1
4,320,242 - OH686_21100 0.17 -0.1
4,320,242 - OH686_21100 0.17 +0.3
4,320,242 - OH686_21100 0.17 +0.5
4,320,242 - OH686_21100 0.17 -0.7
4,320,242 - OH686_21100 0.17 +0.1
4,320,293 + OH686_21100 0.21 -1.0
4,320,293 + OH686_21100 0.21 -0.0
4,320,293 + OH686_21100 0.21 +0.5
4,320,293 + OH686_21100 0.21 -0.1
4,320,293 + OH686_21100 0.21 +0.7
4,320,294 - OH686_21100 0.21 -0.4
4,320,294 - OH686_21100 0.21 -0.9
4,320,294 - OH686_21100 0.21 -0.5
4,320,294 - OH686_21100 0.21 +0.6
4,320,294 - OH686_21100 0.21 -1.2
4,320,294 - OH686_21100 0.21 +0.1
4,320,488 + OH686_21100 0.36 +0.5
4,320,488 + OH686_21100 0.36 +0.8
4,320,488 + OH686_21100 0.36 -0.5
4,320,488 + OH686_21100 0.36 +0.4
4,320,488 + OH686_21100 0.36 -0.2
4,320,489 - OH686_21100 0.36 -0.1
4,320,489 - OH686_21100 0.36 +0.5
4,320,537 + OH686_21100 0.40 -0.1
4,320,537 + OH686_21100 0.40 +0.1
4,320,538 - OH686_21100 0.40 +0.1
4,320,538 - OH686_21100 0.40 -1.1
4,320,538 - OH686_21100 0.40 -0.9
4,320,565 + OH686_21100 0.42 -0.2
4,320,565 + OH686_21100 0.42 +1.6
4,320,565 + OH686_21100 0.42 -1.2
4,320,565 + OH686_21100 0.42 -0.8
4,320,565 + OH686_21100 0.42 -0.3
4,320,566 - OH686_21100 0.42 +0.0
4,320,613 - OH686_21100 0.46 +1.2
4,320,727 + OH686_21100 0.55 +0.6
4,320,727 + OH686_21100 0.55 +0.5
4,320,728 - OH686_21100 0.55 +0.8
4,320,728 - OH686_21100 0.55 -0.7
4,320,728 - OH686_21100 0.55 +0.3
4,320,817 + OH686_21100 0.62 -1.0
4,320,817 + OH686_21100 0.62 +0.5
4,320,817 + OH686_21100 0.62 -0.6
4,320,817 + OH686_21100 0.62 -0.1
4,320,817 + OH686_21100 0.62 +0.2
4,320,817 + OH686_21100 0.62 -1.1
4,320,817 + OH686_21100 0.62 +0.3
4,320,817 + OH686_21100 0.62 +0.8
4,320,817 + OH686_21100 0.62 -0.7
4,320,817 + OH686_21100 0.62 +0.4
4,320,817 + OH686_21100 0.62 -0.6
4,320,817 + OH686_21100 0.62 -0.1
4,320,817 + OH686_21100 0.62 -0.4
4,320,817 + OH686_21100 0.62 +0.3
4,320,817 + OH686_21100 0.62 -0.3
4,320,817 + OH686_21100 0.62 +0.8
4,320,817 + OH686_21100 0.62 +0.4
4,320,817 + OH686_21100 0.62 -0.1
4,320,817 + OH686_21100 0.62 +0.5
4,320,817 + OH686_21100 0.62 -0.1
4,320,817 + OH686_21100 0.62 -0.4
4,320,817 + OH686_21100 0.62 +1.0
4,320,817 + OH686_21100 0.62 -0.0
4,320,818 - OH686_21100 0.63 +0.0
4,320,818 - OH686_21100 0.63 -0.5
4,320,818 - OH686_21100 0.63 -1.3
4,320,818 - OH686_21100 0.63 +0.5
4,320,818 - OH686_21100 0.63 -0.6
4,320,818 - OH686_21100 0.63 -0.2
4,320,818 - OH686_21100 0.63 +0.8
4,320,818 - OH686_21100 0.63 -0.5
4,320,818 - OH686_21100 0.63 -0.2
4,320,818 - OH686_21100 0.63 -0.8
4,320,818 - OH686_21100 0.63 +0.1
4,320,818 - OH686_21100 0.63 +1.6
4,320,818 - OH686_21100 0.63 +0.4
4,320,818 - OH686_21100 0.63 +1.2
4,320,818 - OH686_21100 0.63 -0.4
4,320,818 - OH686_21100 0.63 -0.3
4,320,818 - OH686_21100 0.63 -0.0
4,320,818 - OH686_21100 0.63 +0.7
4,320,818 - OH686_21100 0.63 +0.8
4,320,818 - OH686_21100 0.63 -0.7
4,320,818 - OH686_21100 0.63 +0.9
4,320,818 - OH686_21100 0.63 +1.0
4,320,818 - OH686_21100 0.63 +0.3
4,320,818 - OH686_21100 0.63 -0.3
4,320,818 - OH686_21100 0.63 -1.5
4,320,818 - OH686_21100 0.63 -0.5
4,320,818 - OH686_21100 0.63 -1.6
4,320,818 - OH686_21100 0.63 -0.0
4,320,818 - OH686_21100 0.63 -0.1
4,320,818 - OH686_21100 0.63 +0.9
4,320,823 + OH686_21100 0.63 +0.5
4,320,823 + OH686_21100 0.63 -0.2
4,320,824 - OH686_21100 0.63 +0.6
4,320,824 - OH686_21100 0.63 -0.1
4,320,862 + OH686_21100 0.66 +0.8
4,320,862 + OH686_21100 0.66 -0.3
4,320,862 + OH686_21100 0.66 -0.5
4,320,862 + OH686_21100 0.66 +0.1
4,320,862 + OH686_21100 0.66 -0.3
4,320,862 + OH686_21100 0.66 +0.2
4,320,863 - OH686_21100 0.66 -1.3
4,320,863 - OH686_21100 0.66 -0.1
4,320,863 - OH686_21100 0.66 -0.7

Or see this region's nucleotide sequence