Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_10015 and OH686_10020 overlap by 32 nucleotides OH686_10020 and OH686_10025 are separated by 4 nucleotides
OH686_10015: OH686_10015 - 3-dehydroquinate synthase, at 2,055,954 to 2,057,138
_10015
OH686_10020: OH686_10020 - Shikimate kinase I , at 2,057,107 to 2,057,622
_10020
OH686_10025: OH686_10025 - Type IV pilus biogenesis protein PilQ, at 2,057,627 to 2,059,753
_10025
Position (kb)
2057
2058 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2057.046 kb on - strand at 2057.081 kb on + strand at 2057.081 kb on + strand at 2057.081 kb on + strand at 2057.081 kb on + strand at 2057.081 kb on + strand at 2057.081 kb on + strand at 2057.081 kb on + strand at 2057.082 kb on - strand at 2057.082 kb on - strand at 2057.082 kb on - strand at 2057.082 kb on - strand at 2057.095 kb on + strand at 2057.095 kb on + strand at 2057.096 kb on - strand at 2057.096 kb on - strand at 2057.096 kb on - strand at 2057.096 kb on - strand at 2057.096 kb on - strand at 2057.280 kb on + strand, within OH686_10020 at 2057.280 kb on + strand, within OH686_10020 at 2057.330 kb on + strand, within OH686_10020 at 2057.330 kb on + strand, within OH686_10020 at 2057.330 kb on + strand, within OH686_10020 at 2057.330 kb on + strand, within OH686_10020 at 2057.330 kb on + strand, within OH686_10020 at 2057.331 kb on - strand, within OH686_10020 at 2057.331 kb on - strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.332 kb on + strand, within OH686_10020 at 2057.333 kb on - strand, within OH686_10020 at 2057.333 kb on - strand, within OH686_10020 at 2057.333 kb on - strand, within OH686_10020 at 2057.333 kb on - strand, within OH686_10020 at 2057.333 kb on - strand, within OH686_10020 at 2057.333 kb on - strand, within OH686_10020 at 2057.333 kb on - strand, within OH686_10020 at 2057.508 kb on + strand, within OH686_10020 at 2057.587 kb on - strand at 2057.587 kb on - strand at 2057.614 kb on + strand at 2057.614 kb on + strand at 2057.615 kb on - strand at 2057.615 kb on - strand at 2057.628 kb on + strand at 2057.629 kb on - strand at 2057.633 kb on - strand at 2057.636 kb on + strand at 2057.636 kb on + strand at 2057.637 kb on - strand at 2057.637 kb on - strand at 2057.637 kb on - strand at 2057.654 kb on - strand at 2057.672 kb on - strand at 2057.795 kb on + strand at 2057.795 kb on + strand at 2057.795 kb on + strand at 2057.796 kb on - strand at 2057.892 kb on + strand, within OH686_10025 at 2057.909 kb on - strand, within OH686_10025 at 2057.929 kb on + strand, within OH686_10025 at 2058.077 kb on - strand, within OH686_10025 at 2058.131 kb on + strand, within OH686_10025 at 2058.176 kb on + strand, within OH686_10025 at 2058.177 kb on - strand, within OH686_10025 at 2058.259 kb on + strand, within OH686_10025 at 2058.326 kb on - strand, within OH686_10025 at 2058.330 kb on + strand, within OH686_10025 at 2058.330 kb on + strand, within OH686_10025 at 2058.330 kb on + strand, within OH686_10025 at 2058.334 kb on + strand, within OH686_10025 at 2058.334 kb on + strand, within OH686_10025 at 2058.335 kb on - strand, within OH686_10025 at 2058.343 kb on + strand, within OH686_10025 at 2058.344 kb on - strand, within OH686_10025 at 2058.385 kb on + strand, within OH686_10025 at 2058.385 kb on + strand, within OH686_10025 at 2058.385 kb on + strand, within OH686_10025 at 2058.386 kb on - strand, within OH686_10025 at 2058.416 kb on + strand, within OH686_10025 at 2058.416 kb on + strand, within OH686_10025 at 2058.417 kb on - strand, within OH686_10025 at 2058.451 kb on + strand, within OH686_10025 at 2058.514 kb on + strand, within OH686_10025 at 2058.515 kb on - strand, within OH686_10025 at 2058.515 kb on - strand, within OH686_10025 at 2058.526 kb on + strand, within OH686_10025 at 2058.574 kb on + strand, within OH686_10025 at 2058.594 kb on - strand, within OH686_10025 at 2058.594 kb on - strand, within OH686_10025 at 2058.602 kb on + strand, within OH686_10025 at 2058.603 kb on - strand, within OH686_10025 at 2058.603 kb on - strand, within OH686_10025 at 2058.621 kb on + strand, within OH686_10025 at 2058.621 kb on + strand, within OH686_10025
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,057,046 - -0.1 2,057,081 + -2.8 2,057,081 + -2.9 2,057,081 + -1.5 2,057,081 + -1.2 2,057,081 + -2.4 2,057,081 + -2.0 2,057,081 + -0.4 2,057,082 - +0.2 2,057,082 - -0.4 2,057,082 - +0.3 2,057,082 - -0.2 2,057,095 + -1.7 2,057,095 + +0.8 2,057,096 - +0.2 2,057,096 - -0.3 2,057,096 - +0.2 2,057,096 - +0.9 2,057,096 - +0.9 2,057,280 + OH686_10020 0.34 -3.0 2,057,280 + OH686_10020 0.34 -1.3 2,057,330 + OH686_10020 0.43 -2.2 2,057,330 + OH686_10020 0.43 -2.8 2,057,330 + OH686_10020 0.43 -1.9 2,057,330 + OH686_10020 0.43 -2.7 2,057,330 + OH686_10020 0.43 -1.6 2,057,331 - OH686_10020 0.43 -3.2 2,057,331 - OH686_10020 0.43 -1.7 2,057,332 + OH686_10020 0.44 -1.2 2,057,332 + OH686_10020 0.44 -0.7 2,057,332 + OH686_10020 0.44 -2.5 2,057,332 + OH686_10020 0.44 -2.4 2,057,332 + OH686_10020 0.44 -2.3 2,057,332 + OH686_10020 0.44 -3.1 2,057,332 + OH686_10020 0.44 -1.4 2,057,332 + OH686_10020 0.44 -2.8 2,057,332 + OH686_10020 0.44 -2.2 2,057,332 + OH686_10020 0.44 -1.6 2,057,333 - OH686_10020 0.44 -1.3 2,057,333 - OH686_10020 0.44 -4.1 2,057,333 - OH686_10020 0.44 -0.4 2,057,333 - OH686_10020 0.44 -2.7 2,057,333 - OH686_10020 0.44 -0.4 2,057,333 - OH686_10020 0.44 -2.7 2,057,333 - OH686_10020 0.44 -3.0 2,057,508 + OH686_10020 0.78 -3.2 2,057,587 - -2.1 2,057,587 - -0.9 2,057,614 + -3.3 2,057,614 + -2.0 2,057,615 - -1.2 2,057,615 - +0.1 2,057,628 + -0.9 2,057,629 - +0.1 2,057,633 - -0.0 2,057,636 + +0.2 2,057,636 + -0.1 2,057,637 - +1.9 2,057,637 - +0.2 2,057,637 - -1.1 2,057,654 - +0.5 2,057,672 - +0.2 2,057,795 + -0.5 2,057,795 + +0.2 2,057,795 + -0.1 2,057,796 - +0.0 2,057,892 + OH686_10025 0.12 -0.4 2,057,909 - OH686_10025 0.13 +0.8 2,057,929 + OH686_10025 0.14 +0.0 2,058,077 - OH686_10025 0.21 -0.2 2,058,131 + OH686_10025 0.24 -0.9 2,058,176 + OH686_10025 0.26 -0.2 2,058,177 - OH686_10025 0.26 +0.1 2,058,259 + OH686_10025 0.30 -2.7 2,058,326 - OH686_10025 0.33 +0.1 2,058,330 + OH686_10025 0.33 -0.3 2,058,330 + OH686_10025 0.33 -0.8 2,058,330 + OH686_10025 0.33 -1.4 2,058,334 + OH686_10025 0.33 -0.4 2,058,334 + OH686_10025 0.33 -0.9 2,058,335 - OH686_10025 0.33 +0.2 2,058,343 + OH686_10025 0.34 -1.1 2,058,344 - OH686_10025 0.34 -0.3 2,058,385 + OH686_10025 0.36 -0.4 2,058,385 + OH686_10025 0.36 -0.3 2,058,385 + OH686_10025 0.36 -0.6 2,058,386 - OH686_10025 0.36 +0.6 2,058,416 + OH686_10025 0.37 -0.8 2,058,416 + OH686_10025 0.37 -0.5 2,058,417 - OH686_10025 0.37 +0.3 2,058,451 + OH686_10025 0.39 -1.2 2,058,514 + OH686_10025 0.42 -0.5 2,058,515 - OH686_10025 0.42 +0.1 2,058,515 - OH686_10025 0.42 +0.5 2,058,526 + OH686_10025 0.42 -0.7 2,058,574 + OH686_10025 0.45 -0.3 2,058,594 - OH686_10025 0.45 +0.2 2,058,594 - OH686_10025 0.45 -0.1 2,058,602 + OH686_10025 0.46 -0.0 2,058,603 - OH686_10025 0.46 +0.8 2,058,603 - OH686_10025 0.46 +0.1 2,058,621 + OH686_10025 0.47 -0.8 2,058,621 + OH686_10025 0.47 -0.4
Or see this region's nucleotide sequence