Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4447 and Echvi_4448 are separated by 134 nucleotides Echvi_4448 and Echvi_4449 are separated by 593 nucleotides Echvi_4449 and Echvi_4450 are separated by 34 nucleotides
Echvi_4447: Echvi_4447 - Helix-turn-helix., at 5,321,409 to 5,321,810
_4447
Echvi_4448: Echvi_4448 - hypothetical protein, at 5,321,945 to 5,322,151
_4448
Echvi_4449: Echvi_4449 - Thiol-disulfide isomerase and thioredoxins, at 5,322,745 to 5,324,097
_4449
Echvi_4450: Echvi_4450 - TonB-linked outer membrane protein, SusC/RagA family, at 5,324,132 to 5,327,344
_4450
Position (kb) 5322
5323
5324
5325 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5321.760 kb on + strand, within Echvi_4447 at 5321.763 kb on - strand, within Echvi_4447 at 5321.827 kb on + strand at 5321.828 kb on - strand at 5321.850 kb on + strand at 5321.851 kb on - strand at 5321.928 kb on + strand at 5321.932 kb on + strand at 5321.941 kb on + strand at 5321.942 kb on - strand at 5321.986 kb on + strand, within Echvi_4448 at 5321.986 kb on + strand, within Echvi_4448 at 5322.007 kb on + strand, within Echvi_4448 at 5322.007 kb on + strand, within Echvi_4448 at 5322.008 kb on - strand, within Echvi_4448 at 5322.033 kb on + strand, within Echvi_4448 at 5322.034 kb on - strand, within Echvi_4448 at 5322.037 kb on - strand, within Echvi_4448 at 5322.055 kb on + strand, within Echvi_4448 at 5322.056 kb on - strand, within Echvi_4448 at 5322.056 kb on - strand, within Echvi_4448 at 5322.056 kb on - strand, within Echvi_4448 at 5322.060 kb on + strand, within Echvi_4448 at 5322.060 kb on + strand, within Echvi_4448 at 5322.060 kb on + strand, within Echvi_4448 at 5322.061 kb on - strand, within Echvi_4448 at 5322.066 kb on - strand, within Echvi_4448 at 5322.066 kb on - strand, within Echvi_4448 at 5322.068 kb on + strand, within Echvi_4448 at 5322.069 kb on - strand, within Echvi_4448 at 5322.111 kb on - strand, within Echvi_4448 at 5322.111 kb on - strand, within Echvi_4448 at 5322.111 kb on - strand, within Echvi_4448 at 5322.118 kb on - strand, within Echvi_4448 at 5322.165 kb on + strand at 5322.204 kb on - strand at 5322.204 kb on - strand at 5322.205 kb on + strand at 5322.206 kb on - strand at 5322.208 kb on + strand at 5322.209 kb on - strand at 5322.209 kb on - strand at 5322.209 kb on - strand at 5322.227 kb on - strand at 5322.237 kb on + strand at 5322.260 kb on + strand at 5322.263 kb on + strand at 5322.273 kb on - strand at 5322.307 kb on + strand at 5322.308 kb on - strand at 5322.335 kb on + strand at 5322.339 kb on + strand at 5322.339 kb on + strand at 5322.350 kb on - strand at 5322.431 kb on - strand at 5322.431 kb on - strand at 5322.433 kb on - strand at 5322.433 kb on - strand at 5322.460 kb on + strand at 5322.466 kb on + strand at 5322.466 kb on + strand at 5322.473 kb on + strand at 5322.485 kb on + strand at 5322.485 kb on + strand at 5322.486 kb on - strand at 5322.486 kb on - strand at 5322.486 kb on - strand at 5322.486 kb on - strand at 5322.486 kb on - strand at 5322.489 kb on - strand at 5322.493 kb on - strand at 5322.500 kb on - strand at 5322.502 kb on + strand at 5322.506 kb on + strand at 5322.507 kb on - strand at 5322.507 kb on - strand at 5322.507 kb on - strand at 5322.512 kb on - strand at 5322.580 kb on - strand at 5322.682 kb on + strand at 5322.685 kb on + strand at 5322.689 kb on + strand at 5322.689 kb on + strand at 5322.689 kb on + strand at 5322.689 kb on + strand at 5322.689 kb on + strand at 5322.689 kb on + strand at 5322.689 kb on + strand at 5322.690 kb on - strand at 5322.737 kb on + strand at 5322.737 kb on + strand at 5322.740 kb on + strand at 5322.741 kb on - strand at 5322.741 kb on - strand at 5322.744 kb on + strand at 5322.779 kb on - strand at 5322.779 kb on - strand at 5322.782 kb on + strand at 5322.782 kb on + strand at 5322.782 kb on + strand at 5322.783 kb on - strand at 5322.783 kb on - strand at 5322.783 kb on - strand at 5322.783 kb on - strand at 5322.804 kb on - strand at 5322.804 kb on - strand at 5322.804 kb on - strand at 5322.927 kb on + strand, within Echvi_4449 at 5322.951 kb on - strand, within Echvi_4449 at 5322.951 kb on - strand, within Echvi_4449 at 5323.042 kb on - strand, within Echvi_4449 at 5323.085 kb on + strand, within Echvi_4449 at 5323.090 kb on + strand, within Echvi_4449 at 5323.139 kb on + strand, within Echvi_4449 at 5323.177 kb on - strand, within Echvi_4449 at 5323.177 kb on - strand, within Echvi_4449 at 5323.177 kb on - strand, within Echvi_4449 at 5323.191 kb on - strand, within Echvi_4449 at 5323.216 kb on + strand, within Echvi_4449 at 5323.217 kb on - strand, within Echvi_4449 at 5323.220 kb on + strand, within Echvi_4449 at 5323.221 kb on - strand, within Echvi_4449 at 5323.221 kb on - strand, within Echvi_4449 at 5323.221 kb on - strand, within Echvi_4449 at 5323.221 kb on - strand, within Echvi_4449 at 5323.221 kb on - strand, within Echvi_4449 at 5323.221 kb on - strand, within Echvi_4449 at 5323.221 kb on - strand, within Echvi_4449 at 5323.244 kb on + strand, within Echvi_4449 at 5323.245 kb on - strand, within Echvi_4449 at 5323.245 kb on - strand, within Echvi_4449 at 5323.245 kb on - strand, within Echvi_4449 at 5323.245 kb on - strand, within Echvi_4449 at 5323.429 kb on + strand, within Echvi_4449 at 5323.430 kb on - strand, within Echvi_4449 at 5323.454 kb on - strand, within Echvi_4449 at 5323.454 kb on - strand, within Echvi_4449 at 5323.522 kb on + strand, within Echvi_4449 at 5323.538 kb on - strand, within Echvi_4449 at 5323.586 kb on + strand, within Echvi_4449 at 5323.586 kb on + strand, within Echvi_4449 at 5323.605 kb on - strand, within Echvi_4449 at 5323.610 kb on - strand, within Echvi_4449 at 5323.630 kb on + strand, within Echvi_4449 at 5323.631 kb on - strand, within Echvi_4449 at 5323.672 kb on - strand, within Echvi_4449 at 5323.672 kb on - strand, within Echvi_4449 at 5323.677 kb on - strand, within Echvi_4449 at 5323.702 kb on + strand, within Echvi_4449 at 5323.702 kb on + strand, within Echvi_4449 at 5323.778 kb on + strand, within Echvi_4449 at 5323.779 kb on - strand, within Echvi_4449 at 5323.801 kb on - strand, within Echvi_4449 at 5323.841 kb on + strand, within Echvi_4449 at 5323.884 kb on - strand, within Echvi_4449 at 5323.962 kb on + strand at 5323.962 kb on + strand at 5323.963 kb on - strand at 5323.963 kb on - strand at 5323.967 kb on + strand at 5323.968 kb on - strand at 5323.971 kb on + strand at 5323.972 kb on - strand at 5324.008 kb on - strand at 5324.117 kb on - strand at 5324.131 kb on + strand at 5324.131 kb on + strand at 5324.132 kb on - strand at 5324.132 kb on - strand at 5324.143 kb on + strand at 5324.143 kb on + strand at 5324.145 kb on + strand at 5324.145 kb on + strand at 5324.145 kb on + strand at 5324.198 kb on + strand at 5324.198 kb on + strand at 5324.198 kb on + strand at 5324.198 kb on + strand at 5324.199 kb on - strand at 5324.199 kb on - strand at 5324.199 kb on - strand at 5324.257 kb on - strand at 5324.324 kb on - strand at 5324.340 kb on + strand at 5324.340 kb on + strand at 5324.341 kb on - strand at 5324.351 kb on + strand at 5324.383 kb on + strand at 5324.384 kb on - strand at 5324.413 kb on - strand at 5324.543 kb on - strand, within Echvi_4450 at 5324.548 kb on + strand, within Echvi_4450 at 5324.549 kb on - strand, within Echvi_4450 at 5324.589 kb on + strand, within Echvi_4450 at 5324.646 kb on + strand, within Echvi_4450 at 5324.646 kb on + strand, within Echvi_4450 at 5324.647 kb on - strand, within Echvi_4450 at 5324.647 kb on - strand, within Echvi_4450 at 5324.647 kb on - strand, within Echvi_4450 at 5324.656 kb on + strand, within Echvi_4450 at 5324.743 kb on - strand, within Echvi_4450 at 5324.743 kb on - strand, within Echvi_4450 at 5324.861 kb on - strand, within Echvi_4450 at 5324.861 kb on - strand, within Echvi_4450 at 5324.864 kb on - strand, within Echvi_4450 at 5324.891 kb on + strand, within Echvi_4450 at 5324.892 kb on - strand, within Echvi_4450 at 5324.921 kb on - strand, within Echvi_4450 at 5324.922 kb on + strand, within Echvi_4450 at 5324.923 kb on - strand, within Echvi_4450 at 5324.994 kb on + strand, within Echvi_4450 at 5325.026 kb on - strand, within Echvi_4450 at 5325.066 kb on + strand, within Echvi_4450
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 5,321,760 + Echvi_4447 0.87 -0.2 5,321,763 - Echvi_4447 0.88 +0.6 5,321,827 + +0.1 5,321,828 - +0.2 5,321,850 + -0.0 5,321,851 - -0.5 5,321,928 + -2.5 5,321,932 + +0.1 5,321,941 + -0.6 5,321,942 - -1.9 5,321,986 + Echvi_4448 0.20 -0.4 5,321,986 + Echvi_4448 0.20 -0.0 5,322,007 + Echvi_4448 0.30 -0.5 5,322,007 + Echvi_4448 0.30 -0.1 5,322,008 - Echvi_4448 0.30 +1.3 5,322,033 + Echvi_4448 0.43 -1.8 5,322,034 - Echvi_4448 0.43 -0.3 5,322,037 - Echvi_4448 0.44 +0.2 5,322,055 + Echvi_4448 0.53 -0.8 5,322,056 - Echvi_4448 0.54 -0.5 5,322,056 - Echvi_4448 0.54 +0.6 5,322,056 - Echvi_4448 0.54 -1.0 5,322,060 + Echvi_4448 0.56 +0.3 5,322,060 + Echvi_4448 0.56 +0.1 5,322,060 + Echvi_4448 0.56 -0.5 5,322,061 - Echvi_4448 0.56 -0.4 5,322,066 - Echvi_4448 0.58 -1.2 5,322,066 - Echvi_4448 0.58 +0.5 5,322,068 + Echvi_4448 0.59 -0.4 5,322,069 - Echvi_4448 0.60 -0.6 5,322,111 - Echvi_4448 0.80 -0.3 5,322,111 - Echvi_4448 0.80 -0.2 5,322,111 - Echvi_4448 0.80 +0.4 5,322,118 - Echvi_4448 0.84 -2.3 5,322,165 + -0.3 5,322,204 - -0.5 5,322,204 - -0.1 5,322,205 + -0.6 5,322,206 - -0.0 5,322,208 + -0.6 5,322,209 - +0.3 5,322,209 - -0.6 5,322,209 - -2.4 5,322,227 - -1.0 5,322,237 + -1.2 5,322,260 + +0.1 5,322,263 + -0.8 5,322,273 - +0.2 5,322,307 + -0.9 5,322,308 - -0.7 5,322,335 + -0.6 5,322,339 + +1.0 5,322,339 + -0.4 5,322,350 - +0.8 5,322,431 - -0.2 5,322,431 - +0.9 5,322,433 - -0.4 5,322,433 - -0.5 5,322,460 + +2.0 5,322,466 + -1.5 5,322,466 + -0.9 5,322,473 + -0.4 5,322,485 + +0.3 5,322,485 + -0.9 5,322,486 - +0.1 5,322,486 - +0.0 5,322,486 - +0.3 5,322,486 - +0.3 5,322,486 - +1.8 5,322,489 - +1.2 5,322,493 - -0.0 5,322,500 - -0.0 5,322,502 + -1.6 5,322,506 + -0.3 5,322,507 - -0.2 5,322,507 - +0.4 5,322,507 - -0.0 5,322,512 - -0.7 5,322,580 - +0.4 5,322,682 + -0.3 5,322,685 + -0.2 5,322,689 + -1.1 5,322,689 + -2.0 5,322,689 + -1.1 5,322,689 + -0.8 5,322,689 + -0.7 5,322,689 + +0.3 5,322,689 + -1.9 5,322,690 - +0.2 5,322,737 + +0.1 5,322,737 + -1.5 5,322,740 + -0.4 5,322,741 - -0.7 5,322,741 - +0.0 5,322,744 + -0.9 5,322,779 - -0.5 5,322,779 - -0.3 5,322,782 + -1.7 5,322,782 + -0.4 5,322,782 + +0.2 5,322,783 - -1.5 5,322,783 - -0.8 5,322,783 - -0.7 5,322,783 - +0.4 5,322,804 - +0.0 5,322,804 - -0.2 5,322,804 - -0.1 5,322,927 + Echvi_4449 0.13 -1.2 5,322,951 - Echvi_4449 0.15 +1.0 5,322,951 - Echvi_4449 0.15 -0.9 5,323,042 - Echvi_4449 0.22 -1.5 5,323,085 + Echvi_4449 0.25 +0.7 5,323,090 + Echvi_4449 0.25 -1.4 5,323,139 + Echvi_4449 0.29 -1.5 5,323,177 - Echvi_4449 0.32 +0.4 5,323,177 - Echvi_4449 0.32 +2.1 5,323,177 - Echvi_4449 0.32 -0.3 5,323,191 - Echvi_4449 0.33 -2.0 5,323,216 + Echvi_4449 0.35 -1.0 5,323,217 - Echvi_4449 0.35 -0.6 5,323,220 + Echvi_4449 0.35 +1.3 5,323,221 - Echvi_4449 0.35 -2.1 5,323,221 - Echvi_4449 0.35 -0.6 5,323,221 - Echvi_4449 0.35 -1.3 5,323,221 - Echvi_4449 0.35 -0.4 5,323,221 - Echvi_4449 0.35 +0.2 5,323,221 - Echvi_4449 0.35 +0.8 5,323,221 - Echvi_4449 0.35 +0.2 5,323,244 + Echvi_4449 0.37 -0.8 5,323,245 - Echvi_4449 0.37 -0.6 5,323,245 - Echvi_4449 0.37 -0.5 5,323,245 - Echvi_4449 0.37 -0.3 5,323,245 - Echvi_4449 0.37 -1.9 5,323,429 + Echvi_4449 0.51 -0.4 5,323,430 - Echvi_4449 0.51 -0.4 5,323,454 - Echvi_4449 0.52 -1.5 5,323,454 - Echvi_4449 0.52 -1.3 5,323,522 + Echvi_4449 0.57 -1.1 5,323,538 - Echvi_4449 0.59 -0.2 5,323,586 + Echvi_4449 0.62 -0.8 5,323,586 + Echvi_4449 0.62 -1.0 5,323,605 - Echvi_4449 0.64 +0.2 5,323,610 - Echvi_4449 0.64 +0.6 5,323,630 + Echvi_4449 0.65 -0.8 5,323,631 - Echvi_4449 0.65 +0.7 5,323,672 - Echvi_4449 0.69 -0.6 5,323,672 - Echvi_4449 0.69 -0.4 5,323,677 - Echvi_4449 0.69 -1.4 5,323,702 + Echvi_4449 0.71 +0.4 5,323,702 + Echvi_4449 0.71 -0.9 5,323,778 + Echvi_4449 0.76 -1.5 5,323,779 - Echvi_4449 0.76 +0.2 5,323,801 - Echvi_4449 0.78 -1.9 5,323,841 + Echvi_4449 0.81 -0.5 5,323,884 - Echvi_4449 0.84 -1.1 5,323,962 + +0.4 5,323,962 + -1.5 5,323,963 - -0.4 5,323,963 - -1.0 5,323,967 + -1.2 5,323,968 - +0.0 5,323,971 + -0.2 5,323,972 - +0.2 5,324,008 - +0.4 5,324,117 - +0.2 5,324,131 + -2.4 5,324,131 + +0.1 5,324,132 - -0.3 5,324,132 - -0.7 5,324,143 + +0.0 5,324,143 + -0.3 5,324,145 + -1.7 5,324,145 + +0.4 5,324,145 + -0.5 5,324,198 + -1.7 5,324,198 + +0.6 5,324,198 + -0.2 5,324,198 + -0.5 5,324,199 - -1.6 5,324,199 - -0.0 5,324,199 - -0.4 5,324,257 - +1.1 5,324,324 - +1.4 5,324,340 + -0.3 5,324,340 + +0.1 5,324,341 - +0.0 5,324,351 + +0.3 5,324,383 + -1.0 5,324,384 - +0.3 5,324,413 - -0.1 5,324,543 - Echvi_4450 0.13 -0.6 5,324,548 + Echvi_4450 0.13 +2.5 5,324,549 - Echvi_4450 0.13 -0.1 5,324,589 + Echvi_4450 0.14 +0.5 5,324,646 + Echvi_4450 0.16 -0.2 5,324,646 + Echvi_4450 0.16 -0.2 5,324,647 - Echvi_4450 0.16 +0.3 5,324,647 - Echvi_4450 0.16 -0.5 5,324,647 - Echvi_4450 0.16 -0.9 5,324,656 + Echvi_4450 0.16 -0.3 5,324,743 - Echvi_4450 0.19 -1.3 5,324,743 - Echvi_4450 0.19 +0.5 5,324,861 - Echvi_4450 0.23 +1.4 5,324,861 - Echvi_4450 0.23 -0.4 5,324,864 - Echvi_4450 0.23 -0.6 5,324,891 + Echvi_4450 0.24 +0.1 5,324,892 - Echvi_4450 0.24 +1.3 5,324,921 - Echvi_4450 0.25 +1.5 5,324,922 + Echvi_4450 0.25 +1.0 5,324,923 - Echvi_4450 0.25 -1.0 5,324,994 + Echvi_4450 0.27 -0.3 5,325,026 - Echvi_4450 0.28 -0.3 5,325,066 + Echvi_4450 0.29 +0.1
Or see this region's nucleotide sequence