Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4236 and Echvi_4237 are separated by 11 nucleotides Echvi_4237 and Echvi_4238 are separated by 145 nucleotides
Echvi_4236: Echvi_4236 - Endopolygalacturonase, at 5,080,219 to 5,081,922
_4236
Echvi_4237: Echvi_4237 - Predicted glycosyltransferases, at 5,081,934 to 5,082,854
_4237
Echvi_4238: Echvi_4238 - Sugar transferases involved in lipopolysaccharide synthesis, at 5,083,000 to 5,083,719
_4238
Position (kb) 5081
5082
5083 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5081.184 kb on + strand, within Echvi_4236 at 5081.184 kb on + strand, within Echvi_4236 at 5081.215 kb on + strand, within Echvi_4236 at 5081.215 kb on + strand, within Echvi_4236 at 5081.345 kb on + strand, within Echvi_4236 at 5081.345 kb on + strand, within Echvi_4236 at 5081.345 kb on + strand, within Echvi_4236 at 5081.346 kb on - strand, within Echvi_4236 at 5081.346 kb on - strand, within Echvi_4236 at 5081.346 kb on - strand, within Echvi_4236 at 5081.356 kb on + strand, within Echvi_4236 at 5081.657 kb on + strand, within Echvi_4236 at 5081.797 kb on - strand at 5081.824 kb on + strand at 5081.825 kb on - strand at 5081.913 kb on + strand at 5081.926 kb on + strand at 5081.931 kb on + strand at 5081.932 kb on - strand at 5081.932 kb on - strand at 5081.932 kb on - strand at 5081.932 kb on - strand at 5081.932 kb on - strand at 5081.951 kb on + strand at 5082.097 kb on + strand, within Echvi_4237 at 5082.098 kb on - strand, within Echvi_4237 at 5082.100 kb on + strand, within Echvi_4237 at 5082.336 kb on + strand, within Echvi_4237 at 5082.336 kb on + strand, within Echvi_4237 at 5082.532 kb on - strand, within Echvi_4237 at 5082.594 kb on + strand, within Echvi_4237 at 5082.772 kb on + strand at 5082.773 kb on - strand at 5082.938 kb on + strand at 5082.939 kb on - strand at 5082.941 kb on - strand at 5082.965 kb on + strand at 5083.209 kb on - strand, within Echvi_4238 at 5083.254 kb on + strand, within Echvi_4238 at 5083.254 kb on + strand, within Echvi_4238 at 5083.255 kb on - strand, within Echvi_4238 at 5083.255 kb on - strand, within Echvi_4238 at 5083.308 kb on + strand, within Echvi_4238 at 5083.324 kb on + strand, within Echvi_4238 at 5083.327 kb on - strand, within Echvi_4238 at 5083.455 kb on + strand, within Echvi_4238 at 5083.455 kb on + strand, within Echvi_4238 at 5083.456 kb on - strand, within Echvi_4238 at 5083.456 kb on - strand, within Echvi_4238 at 5083.495 kb on - strand, within Echvi_4238 at 5083.579 kb on + strand, within Echvi_4238 at 5083.625 kb on - strand, within Echvi_4238 at 5083.665 kb on + strand at 5083.718 kb on - strand at 5083.734 kb on - strand at 5083.740 kb on + strand at 5083.741 kb on - strand at 5083.742 kb on + strand at 5083.743 kb on - strand at 5083.743 kb on - strand at 5083.746 kb on + strand at 5083.747 kb on - strand at 5083.747 kb on - strand at 5083.797 kb on - strand at 5083.814 kb on - strand at 5083.817 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 5,081,184 + Echvi_4236 0.57 -0.1 5,081,184 + Echvi_4236 0.57 -0.4 5,081,215 + Echvi_4236 0.58 -1.7 5,081,215 + Echvi_4236 0.58 -1.0 5,081,345 + Echvi_4236 0.66 +0.0 5,081,345 + Echvi_4236 0.66 +0.2 5,081,345 + Echvi_4236 0.66 -0.5 5,081,346 - Echvi_4236 0.66 +0.7 5,081,346 - Echvi_4236 0.66 -0.3 5,081,346 - Echvi_4236 0.66 +0.0 5,081,356 + Echvi_4236 0.67 -0.3 5,081,657 + Echvi_4236 0.84 +0.9 5,081,797 - -0.4 5,081,824 + -0.2 5,081,825 - -1.0 5,081,913 + -0.4 5,081,926 + -0.1 5,081,931 + +0.1 5,081,932 - -1.3 5,081,932 - -0.9 5,081,932 - -0.8 5,081,932 - -0.2 5,081,932 - -0.3 5,081,951 + -0.8 5,082,097 + Echvi_4237 0.18 -1.3 5,082,098 - Echvi_4237 0.18 -0.6 5,082,100 + Echvi_4237 0.18 -0.5 5,082,336 + Echvi_4237 0.44 -0.4 5,082,336 + Echvi_4237 0.44 +0.6 5,082,532 - Echvi_4237 0.65 +0.4 5,082,594 + Echvi_4237 0.72 +0.0 5,082,772 + -0.1 5,082,773 - -0.2 5,082,938 + -0.6 5,082,939 - +0.2 5,082,941 - -0.8 5,082,965 + +0.6 5,083,209 - Echvi_4238 0.29 +1.3 5,083,254 + Echvi_4238 0.35 +0.3 5,083,254 + Echvi_4238 0.35 -0.4 5,083,255 - Echvi_4238 0.35 -0.2 5,083,255 - Echvi_4238 0.35 -2.4 5,083,308 + Echvi_4238 0.43 +0.0 5,083,324 + Echvi_4238 0.45 +1.6 5,083,327 - Echvi_4238 0.45 +0.1 5,083,455 + Echvi_4238 0.63 -0.5 5,083,455 + Echvi_4238 0.63 +0.2 5,083,456 - Echvi_4238 0.63 -0.7 5,083,456 - Echvi_4238 0.63 +0.5 5,083,495 - Echvi_4238 0.69 -0.2 5,083,579 + Echvi_4238 0.80 +0.3 5,083,625 - Echvi_4238 0.87 -0.1 5,083,665 + +2.9 5,083,718 - -1.2 5,083,734 - -1.1 5,083,740 + -0.0 5,083,741 - -0.4 5,083,742 + -1.4 5,083,743 - +0.8 5,083,743 - -0.0 5,083,746 + -0.0 5,083,747 - -0.6 5,083,747 - -1.0 5,083,797 - -0.1 5,083,814 - +0.7 5,083,817 - -0.3
Or see this region's nucleotide sequence