Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4074 and Echvi_4075 overlap by 8 nucleotides Echvi_4075 and Echvi_4076 are separated by 3 nucleotides Echvi_4076 and Echvi_4077 are separated by 269 nucleotides Echvi_4077 and Echvi_4078 are separated by 14 nucleotides
Echvi_4074: Echvi_4074 - Tetratricopeptide repeat., at 4,883,689 to 4,885,437
_4074
Echvi_4075: Echvi_4075 - hypothetical protein, at 4,885,430 to 4,886,170
_4075
Echvi_4076: Echvi_4076 - Membrane-bound metallopeptidase, at 4,886,174 to 4,887,424
_4076
Echvi_4077: Echvi_4077 - twin arginine-targeting protein translocase, TatA/E family, at 4,887,694 to 4,887,900
_4077
Echvi_4078: Echvi_4078 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit, at 4,887,915 to 4,889,342
_4078
Position (kb)
4886
4887
4888 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4885.215 kb on - strand, within Echvi_4074 at 4885.252 kb on + strand, within Echvi_4074 at 4885.253 kb on - strand, within Echvi_4074 at 4885.302 kb on - strand at 4885.302 kb on - strand at 4885.339 kb on - strand at 4885.430 kb on - strand at 4885.436 kb on - strand at 4885.446 kb on + strand at 4885.459 kb on - strand at 4885.504 kb on - strand, within Echvi_4075 at 4885.544 kb on + strand, within Echvi_4075 at 4885.744 kb on + strand, within Echvi_4075 at 4885.780 kb on + strand, within Echvi_4075 at 4885.781 kb on - strand, within Echvi_4075 at 4885.781 kb on - strand, within Echvi_4075 at 4885.784 kb on + strand, within Echvi_4075 at 4885.784 kb on + strand, within Echvi_4075 at 4885.785 kb on - strand, within Echvi_4075 at 4885.791 kb on + strand, within Echvi_4075 at 4885.791 kb on + strand, within Echvi_4075 at 4885.920 kb on - strand, within Echvi_4075 at 4885.920 kb on - strand, within Echvi_4075 at 4885.953 kb on + strand, within Echvi_4075 at 4885.954 kb on - strand, within Echvi_4075 at 4886.039 kb on + strand, within Echvi_4075 at 4886.045 kb on + strand, within Echvi_4075 at 4886.045 kb on + strand, within Echvi_4075 at 4886.045 kb on + strand, within Echvi_4075 at 4886.046 kb on - strand, within Echvi_4075 at 4886.046 kb on - strand, within Echvi_4075 at 4886.046 kb on - strand, within Echvi_4075 at 4886.047 kb on + strand, within Echvi_4075 at 4886.047 kb on + strand, within Echvi_4075 at 4886.047 kb on + strand, within Echvi_4075 at 4886.048 kb on - strand, within Echvi_4075 at 4886.064 kb on + strand, within Echvi_4075 at 4886.064 kb on + strand, within Echvi_4075 at 4886.173 kb on + strand at 4886.174 kb on - strand at 4886.509 kb on - strand, within Echvi_4076 at 4886.509 kb on - strand, within Echvi_4076 at 4886.519 kb on + strand, within Echvi_4076 at 4886.609 kb on + strand, within Echvi_4076 at 4886.610 kb on - strand, within Echvi_4076 at 4886.637 kb on - strand, within Echvi_4076 at 4887.100 kb on + strand, within Echvi_4076 at 4887.251 kb on + strand, within Echvi_4076 at 4887.260 kb on + strand, within Echvi_4076 at 4887.261 kb on - strand, within Echvi_4076 at 4887.261 kb on - strand, within Echvi_4076 at 4887.261 kb on - strand, within Echvi_4076 at 4887.261 kb on - strand, within Echvi_4076 at 4887.529 kb on + strand at 4887.530 kb on - strand at 4887.556 kb on - strand at 4887.561 kb on + strand at 4887.579 kb on + strand at 4887.579 kb on + strand at 4887.579 kb on + strand at 4887.579 kb on + strand at 4887.580 kb on - strand at 4887.580 kb on - strand at 4887.585 kb on + strand at 4887.586 kb on - strand at 4887.657 kb on + strand at 4887.657 kb on + strand at 4887.659 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 4,885,215 - Echvi_4074 0.87 +0.6 4,885,252 + Echvi_4074 0.89 -0.1 4,885,253 - Echvi_4074 0.89 +0.5 4,885,302 - -0.4 4,885,302 - +0.4 4,885,339 - +1.7 4,885,430 - +1.6 4,885,436 - +1.7 4,885,446 + -0.1 4,885,459 - +3.0 4,885,504 - Echvi_4075 0.10 +2.9 4,885,544 + Echvi_4075 0.15 +1.5 4,885,744 + Echvi_4075 0.42 +2.9 4,885,780 + Echvi_4075 0.47 +2.4 4,885,781 - Echvi_4075 0.47 +2.9 4,885,781 - Echvi_4075 0.47 +2.9 4,885,784 + Echvi_4075 0.48 +2.2 4,885,784 + Echvi_4075 0.48 +2.9 4,885,785 - Echvi_4075 0.48 +3.2 4,885,791 + Echvi_4075 0.49 +2.3 4,885,791 + Echvi_4075 0.49 +2.6 4,885,920 - Echvi_4075 0.66 +2.8 4,885,920 - Echvi_4075 0.66 +2.8 4,885,953 + Echvi_4075 0.71 +2.1 4,885,954 - Echvi_4075 0.71 +3.4 4,886,039 + Echvi_4075 0.82 +2.4 4,886,045 + Echvi_4075 0.83 +2.3 4,886,045 + Echvi_4075 0.83 +1.8 4,886,045 + Echvi_4075 0.83 +2.4 4,886,046 - Echvi_4075 0.83 +0.5 4,886,046 - Echvi_4075 0.83 +2.9 4,886,046 - Echvi_4075 0.83 +3.2 4,886,047 + Echvi_4075 0.83 +2.4 4,886,047 + Echvi_4075 0.83 +2.5 4,886,047 + Echvi_4075 0.83 +2.9 4,886,048 - Echvi_4075 0.83 +1.0 4,886,064 + Echvi_4075 0.86 +2.8 4,886,064 + Echvi_4075 0.86 +3.3 4,886,173 + +0.7 4,886,174 - +0.2 4,886,509 - Echvi_4076 0.27 -0.5 4,886,509 - Echvi_4076 0.27 -0.2 4,886,519 + Echvi_4076 0.28 -0.5 4,886,609 + Echvi_4076 0.35 +0.3 4,886,610 - Echvi_4076 0.35 -2.2 4,886,637 - Echvi_4076 0.37 -1.3 4,887,100 + Echvi_4076 0.74 -1.2 4,887,251 + Echvi_4076 0.86 -0.2 4,887,260 + Echvi_4076 0.87 -0.8 4,887,261 - Echvi_4076 0.87 -2.1 4,887,261 - Echvi_4076 0.87 -2.9 4,887,261 - Echvi_4076 0.87 -1.9 4,887,261 - Echvi_4076 0.87 -1.7 4,887,529 + +0.4 4,887,530 - +0.5 4,887,556 - -0.6 4,887,561 + -1.2 4,887,579 + +0.2 4,887,579 + -2.4 4,887,579 + -1.0 4,887,579 + -1.8 4,887,580 - +0.2 4,887,580 - +1.0 4,887,585 + +0.0 4,887,586 - +0.5 4,887,657 + +0.1 4,887,657 + -0.3 4,887,659 + +0.1
Or see this region's nucleotide sequence