Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3545 and Echvi_3546 overlap by 4 nucleotides Echvi_3546 and Echvi_3547 are separated by 1 nucleotides Echvi_3547 and Echvi_3548 overlap by 32 nucleotides
Echvi_3545: Echvi_3545 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 4,203,999 to 4,204,904
_3545
Echvi_3546: Echvi_3546 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 4,204,901 to 4,206,193
_3546
Echvi_3547: Echvi_3547 - ABC-type Mn/Zn transport systems, ATPase component, at 4,206,195 to 4,206,983
_3547
Echvi_3548: Echvi_3548 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 4,206,952 to 4,207,896
_3548
Position (kb)
4204
4205
4206
4207 Strain fitness (log2 ratio)
-1
0
1
2 at 4203.904 kb on + strand at 4203.905 kb on - strand at 4203.905 kb on - strand at 4203.950 kb on + strand at 4203.951 kb on - strand at 4203.958 kb on + strand at 4203.958 kb on + strand at 4203.958 kb on + strand at 4203.962 kb on - strand at 4203.962 kb on - strand at 4203.976 kb on + strand at 4204.026 kb on + strand at 4204.928 kb on - strand at 4205.000 kb on - strand at 4205.002 kb on + strand at 4205.003 kb on - strand at 4205.055 kb on + strand, within Echvi_3546 at 4205.056 kb on - strand, within Echvi_3546 at 4205.056 kb on - strand, within Echvi_3546 at 4205.068 kb on - strand, within Echvi_3546 at 4205.068 kb on - strand, within Echvi_3546 at 4205.093 kb on + strand, within Echvi_3546 at 4205.157 kb on - strand at 4205.309 kb on - strand, within Echvi_3546 at 4205.317 kb on - strand, within Echvi_3546
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 4,203,904 + +0.5 4,203,905 - -1.7 4,203,905 - +0.5 4,203,950 + -0.3 4,203,951 - -1.1 4,203,958 + -0.4 4,203,958 + -0.6 4,203,958 + +0.3 4,203,962 - +0.7 4,203,962 - -0.2 4,203,976 + -0.8 4,204,026 + -0.4 4,204,928 - +1.0 4,205,000 - -0.5 4,205,002 + -0.4 4,205,003 - +1.2 4,205,055 + Echvi_3546 0.12 -1.4 4,205,056 - Echvi_3546 0.12 -1.5 4,205,056 - Echvi_3546 0.12 -0.2 4,205,068 - Echvi_3546 0.13 -1.5 4,205,068 - Echvi_3546 0.13 +0.5 4,205,093 + Echvi_3546 0.15 +0.1 4,205,157 - +1.8 4,205,309 - Echvi_3546 0.32 -1.2 4,205,317 - Echvi_3546 0.32 -1.4
Or see this region's nucleotide sequence