Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3203 and Echvi_3204 are separated by 353 nucleotides Echvi_3204 and Echvi_3205 overlap by 1 nucleotides Echvi_3205 and Echvi_3206 overlap by 4 nucleotides
Echvi_3202: Echvi_3202 - copper-(or silver)-translocating P-type ATPase, at 3,798,772 to 3,802,233
_3202
Echvi_3203: Echvi_3203 - Transposase DDE domain., at 3,800,576 to 3,801,898
_3203
Echvi_3204: Echvi_3204 - Protein of unknown function (DUF2911)., at 3,802,252 to 3,802,833
_3204
Echvi_3205: Echvi_3205 - hypothetical protein, at 3,802,833 to 3,803,546
_3205
Echvi_3206: Echvi_3206 - Amino acid transporters, at 3,803,543 to 3,804,856
_3206
Position (kb)
3802
3803
3804 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3801.858 kb on + strand at 3801.858 kb on + strand at 3801.880 kb on + strand at 3801.884 kb on + strand at 3801.885 kb on - strand at 3801.889 kb on + strand at 3801.890 kb on - strand at 3801.890 kb on - strand at 3801.983 kb on + strand at 3801.983 kb on + strand at 3801.984 kb on - strand at 3801.984 kb on - strand at 3802.019 kb on - strand at 3802.033 kb on - strand at 3802.039 kb on + strand at 3802.197 kb on + strand at 3802.222 kb on - strand at 3802.253 kb on + strand at 3802.283 kb on - strand at 3802.333 kb on + strand, within Echvi_3204 at 3802.333 kb on + strand, within Echvi_3204 at 3802.333 kb on + strand, within Echvi_3204 at 3802.334 kb on - strand, within Echvi_3204 at 3802.338 kb on + strand, within Echvi_3204 at 3802.339 kb on - strand, within Echvi_3204 at 3802.340 kb on + strand, within Echvi_3204 at 3802.341 kb on - strand, within Echvi_3204 at 3802.341 kb on - strand, within Echvi_3204 at 3802.341 kb on - strand, within Echvi_3204 at 3802.341 kb on - strand, within Echvi_3204 at 3802.341 kb on - strand, within Echvi_3204 at 3802.416 kb on - strand, within Echvi_3204 at 3802.416 kb on - strand, within Echvi_3204 at 3802.486 kb on - strand, within Echvi_3204 at 3802.486 kb on - strand, within Echvi_3204 at 3802.496 kb on + strand, within Echvi_3204 at 3802.497 kb on - strand, within Echvi_3204 at 3802.497 kb on - strand, within Echvi_3204 at 3802.550 kb on - strand, within Echvi_3204 at 3802.643 kb on + strand, within Echvi_3204 at 3802.653 kb on + strand, within Echvi_3204 at 3802.813 kb on + strand at 3802.898 kb on + strand at 3802.908 kb on + strand, within Echvi_3205 at 3803.064 kb on + strand, within Echvi_3205 at 3803.065 kb on - strand, within Echvi_3205 at 3803.065 kb on - strand, within Echvi_3205 at 3803.065 kb on - strand, within Echvi_3205 at 3803.065 kb on - strand, within Echvi_3205 at 3803.267 kb on - strand, within Echvi_3205 at 3803.267 kb on - strand, within Echvi_3205 at 3803.267 kb on - strand, within Echvi_3205 at 3803.276 kb on + strand, within Echvi_3205 at 3803.312 kb on - strand, within Echvi_3205 at 3803.450 kb on - strand, within Echvi_3205 at 3803.524 kb on + strand at 3803.524 kb on + strand at 3803.525 kb on - strand at 3803.525 kb on - strand at 3803.527 kb on + strand at 3803.555 kb on - strand at 3803.573 kb on + strand at 3803.574 kb on - strand at 3803.603 kb on + strand at 3803.626 kb on + strand at 3803.626 kb on + strand at 3803.627 kb on - strand at 3803.675 kb on + strand, within Echvi_3206 at 3803.706 kb on - strand, within Echvi_3206 at 3803.706 kb on - strand, within Echvi_3206 at 3803.706 kb on - strand, within Echvi_3206 at 3803.742 kb on + strand, within Echvi_3206 at 3803.742 kb on + strand, within Echvi_3206 at 3803.743 kb on - strand, within Echvi_3206 at 3803.746 kb on + strand, within Echvi_3206 at 3803.747 kb on - strand, within Echvi_3206 at 3803.747 kb on - strand, within Echvi_3206 at 3803.748 kb on + strand, within Echvi_3206 at 3803.750 kb on + strand, within Echvi_3206 at 3803.751 kb on - strand, within Echvi_3206 at 3803.751 kb on - strand, within Echvi_3206 at 3803.764 kb on + strand, within Echvi_3206 at 3803.782 kb on + strand, within Echvi_3206 at 3803.785 kb on - strand, within Echvi_3206 at 3803.830 kb on + strand, within Echvi_3206 at 3803.859 kb on + strand, within Echvi_3206 at 3803.859 kb on + strand, within Echvi_3206 at 3803.860 kb on - strand, within Echvi_3206 at 3803.869 kb on + strand, within Echvi_3206 at 3803.869 kb on + strand, within Echvi_3206 at 3803.869 kb on + strand, within Echvi_3206 at 3803.869 kb on + strand, within Echvi_3206 at 3803.869 kb on + strand, within Echvi_3206 at 3803.870 kb on - strand, within Echvi_3206 at 3803.870 kb on - strand, within Echvi_3206 at 3803.870 kb on - strand, within Echvi_3206 at 3803.870 kb on - strand, within Echvi_3206 at 3803.880 kb on - strand, within Echvi_3206 at 3803.906 kb on - strand, within Echvi_3206 at 3803.915 kb on - strand, within Echvi_3206 at 3803.923 kb on + strand, within Echvi_3206 at 3803.923 kb on + strand, within Echvi_3206 at 3803.923 kb on + strand, within Echvi_3206 at 3803.930 kb on - strand, within Echvi_3206 at 3803.984 kb on - strand, within Echvi_3206 at 3803.990 kb on + strand, within Echvi_3206 at 3803.990 kb on + strand, within Echvi_3206 at 3803.990 kb on + strand, within Echvi_3206 at 3803.990 kb on + strand, within Echvi_3206 at 3803.990 kb on + strand, within Echvi_3206 at 3803.990 kb on + strand, within Echvi_3206 at 3803.991 kb on - strand, within Echvi_3206 at 3803.991 kb on - strand, within Echvi_3206 at 3803.991 kb on - strand, within Echvi_3206 at 3803.991 kb on - strand, within Echvi_3206 at 3803.991 kb on - strand, within Echvi_3206 at 3803.991 kb on - strand, within Echvi_3206 at 3803.991 kb on - strand, within Echvi_3206 at 3804.002 kb on - strand, within Echvi_3206 at 3804.108 kb on - strand, within Echvi_3206 at 3804.144 kb on - strand, within Echvi_3206 at 3804.158 kb on - strand, within Echvi_3206 at 3804.158 kb on - strand, within Echvi_3206 at 3804.160 kb on + strand, within Echvi_3206 at 3804.209 kb on - strand, within Echvi_3206 at 3804.211 kb on + strand, within Echvi_3206 at 3804.212 kb on - strand, within Echvi_3206 at 3804.212 kb on - strand, within Echvi_3206 at 3804.215 kb on + strand, within Echvi_3206 at 3804.266 kb on - strand, within Echvi_3206 at 3804.267 kb on + strand, within Echvi_3206 at 3804.268 kb on - strand, within Echvi_3206 at 3804.283 kb on - strand, within Echvi_3206 at 3804.351 kb on - strand, within Echvi_3206 at 3804.410 kb on + strand, within Echvi_3206 at 3804.428 kb on + strand, within Echvi_3206 at 3804.428 kb on + strand, within Echvi_3206 at 3804.428 kb on + strand, within Echvi_3206 at 3804.428 kb on + strand, within Echvi_3206 at 3804.429 kb on - strand, within Echvi_3206 at 3804.429 kb on - strand, within Echvi_3206 at 3804.519 kb on + strand, within Echvi_3206 at 3804.519 kb on + strand, within Echvi_3206 at 3804.519 kb on + strand, within Echvi_3206 at 3804.520 kb on - strand, within Echvi_3206
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,801,858 + -0.7 3,801,858 + -0.3 3,801,880 + -1.0 3,801,884 + -0.7 3,801,885 - -0.2 3,801,889 + +0.4 3,801,890 - -0.4 3,801,890 - -0.7 3,801,983 + -2.0 3,801,983 + +0.0 3,801,984 - +0.3 3,801,984 - +0.7 3,802,019 - +0.4 3,802,033 - -0.1 3,802,039 + -0.2 3,802,197 + -0.1 3,802,222 - -1.0 3,802,253 + -0.2 3,802,283 - -1.0 3,802,333 + Echvi_3204 0.14 +0.5 3,802,333 + Echvi_3204 0.14 +0.5 3,802,333 + Echvi_3204 0.14 -0.5 3,802,334 - Echvi_3204 0.14 -0.7 3,802,338 + Echvi_3204 0.15 +0.3 3,802,339 - Echvi_3204 0.15 +0.5 3,802,340 + Echvi_3204 0.15 +1.8 3,802,341 - Echvi_3204 0.15 -0.2 3,802,341 - Echvi_3204 0.15 -0.9 3,802,341 - Echvi_3204 0.15 -1.2 3,802,341 - Echvi_3204 0.15 -1.6 3,802,341 - Echvi_3204 0.15 +1.3 3,802,416 - Echvi_3204 0.28 +1.3 3,802,416 - Echvi_3204 0.28 -1.7 3,802,486 - Echvi_3204 0.40 -0.1 3,802,486 - Echvi_3204 0.40 +0.4 3,802,496 + Echvi_3204 0.42 -0.7 3,802,497 - Echvi_3204 0.42 +0.5 3,802,497 - Echvi_3204 0.42 -0.8 3,802,550 - Echvi_3204 0.51 -0.3 3,802,643 + Echvi_3204 0.67 +0.7 3,802,653 + Echvi_3204 0.69 +1.2 3,802,813 + -1.1 3,802,898 + -0.2 3,802,908 + Echvi_3205 0.11 -0.4 3,803,064 + Echvi_3205 0.32 -0.4 3,803,065 - Echvi_3205 0.32 -1.1 3,803,065 - Echvi_3205 0.32 -0.8 3,803,065 - Echvi_3205 0.32 -0.4 3,803,065 - Echvi_3205 0.32 +0.6 3,803,267 - Echvi_3205 0.61 -0.9 3,803,267 - Echvi_3205 0.61 -1.8 3,803,267 - Echvi_3205 0.61 -0.9 3,803,276 + Echvi_3205 0.62 -1.0 3,803,312 - Echvi_3205 0.67 +0.0 3,803,450 - Echvi_3205 0.86 +0.9 3,803,524 + +0.7 3,803,524 + +0.1 3,803,525 - -2.1 3,803,525 - -0.6 3,803,527 + -0.5 3,803,555 - -0.5 3,803,573 + -0.1 3,803,574 - -0.1 3,803,603 + +0.7 3,803,626 + +0.2 3,803,626 + -0.4 3,803,627 - +1.2 3,803,675 + Echvi_3206 0.10 +0.6 3,803,706 - Echvi_3206 0.12 +0.0 3,803,706 - Echvi_3206 0.12 +0.1 3,803,706 - Echvi_3206 0.12 -1.0 3,803,742 + Echvi_3206 0.15 +0.5 3,803,742 + Echvi_3206 0.15 +0.6 3,803,743 - Echvi_3206 0.15 -0.7 3,803,746 + Echvi_3206 0.15 -0.3 3,803,747 - Echvi_3206 0.16 -0.1 3,803,747 - Echvi_3206 0.16 +0.6 3,803,748 + Echvi_3206 0.16 +0.7 3,803,750 + Echvi_3206 0.16 +0.1 3,803,751 - Echvi_3206 0.16 -0.7 3,803,751 - Echvi_3206 0.16 -0.5 3,803,764 + Echvi_3206 0.17 -0.6 3,803,782 + Echvi_3206 0.18 -0.9 3,803,785 - Echvi_3206 0.18 -0.6 3,803,830 + Echvi_3206 0.22 -1.0 3,803,859 + Echvi_3206 0.24 -0.3 3,803,859 + Echvi_3206 0.24 -0.3 3,803,860 - Echvi_3206 0.24 -0.8 3,803,869 + Echvi_3206 0.25 -1.0 3,803,869 + Echvi_3206 0.25 -0.5 3,803,869 + Echvi_3206 0.25 -0.7 3,803,869 + Echvi_3206 0.25 -1.0 3,803,869 + Echvi_3206 0.25 +0.5 3,803,870 - Echvi_3206 0.25 -1.4 3,803,870 - Echvi_3206 0.25 -0.1 3,803,870 - Echvi_3206 0.25 -0.1 3,803,870 - Echvi_3206 0.25 -0.5 3,803,880 - Echvi_3206 0.26 +0.0 3,803,906 - Echvi_3206 0.28 -1.1 3,803,915 - Echvi_3206 0.28 +0.1 3,803,923 + Echvi_3206 0.29 +1.1 3,803,923 + Echvi_3206 0.29 +0.4 3,803,923 + Echvi_3206 0.29 -0.4 3,803,930 - Echvi_3206 0.29 -0.1 3,803,984 - Echvi_3206 0.34 +0.9 3,803,990 + Echvi_3206 0.34 -0.5 3,803,990 + Echvi_3206 0.34 -0.0 3,803,990 + Echvi_3206 0.34 +0.6 3,803,990 + Echvi_3206 0.34 +0.1 3,803,990 + Echvi_3206 0.34 +0.5 3,803,990 + Echvi_3206 0.34 +0.1 3,803,991 - Echvi_3206 0.34 +0.3 3,803,991 - Echvi_3206 0.34 -0.9 3,803,991 - Echvi_3206 0.34 -0.2 3,803,991 - Echvi_3206 0.34 -0.1 3,803,991 - Echvi_3206 0.34 -0.1 3,803,991 - Echvi_3206 0.34 +0.4 3,803,991 - Echvi_3206 0.34 -0.1 3,804,002 - Echvi_3206 0.35 +0.8 3,804,108 - Echvi_3206 0.43 -0.4 3,804,144 - Echvi_3206 0.46 -0.6 3,804,158 - Echvi_3206 0.47 +0.8 3,804,158 - Echvi_3206 0.47 +0.3 3,804,160 + Echvi_3206 0.47 -0.7 3,804,209 - Echvi_3206 0.51 -0.8 3,804,211 + Echvi_3206 0.51 -0.3 3,804,212 - Echvi_3206 0.51 -0.6 3,804,212 - Echvi_3206 0.51 +0.5 3,804,215 + Echvi_3206 0.51 -0.4 3,804,266 - Echvi_3206 0.55 +0.5 3,804,267 + Echvi_3206 0.55 +0.1 3,804,268 - Echvi_3206 0.55 +0.2 3,804,283 - Echvi_3206 0.56 -0.2 3,804,351 - Echvi_3206 0.61 -0.9 3,804,410 + Echvi_3206 0.66 +1.4 3,804,428 + Echvi_3206 0.67 -1.4 3,804,428 + Echvi_3206 0.67 +0.1 3,804,428 + Echvi_3206 0.67 +0.6 3,804,428 + Echvi_3206 0.67 -0.5 3,804,429 - Echvi_3206 0.67 -0.0 3,804,429 - Echvi_3206 0.67 -1.1 3,804,519 + Echvi_3206 0.74 +0.8 3,804,519 + Echvi_3206 0.74 -0.0 3,804,519 + Echvi_3206 0.74 -0.7 3,804,520 - Echvi_3206 0.74 +0.4
Or see this region's nucleotide sequence