Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2963 and Echvi_2964 are separated by 93 nucleotides Echvi_2964 and Echvi_2965 are separated by 198 nucleotides Echvi_2965 and Echvi_2966 are separated by 128 nucleotides
Echvi_2963: Echvi_2963 - hypothetical protein, at 3,540,152 to 3,541,384
_2963
Echvi_2964: Echvi_2964 - Serine acetyltransferase, at 3,541,478 to 3,542,065
_2964
Echvi_2965: Echvi_2965 - Uncharacterized protein conserved in archaea, at 3,542,264 to 3,543,370
_2965
Echvi_2966: Echvi_2966 - Glycosyltransferase, at 3,543,499 to 3,544,539
_2966
Position (kb)
3542
3543
3544 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3541.265 kb on + strand at 3541.266 kb on - strand at 3541.274 kb on - strand at 3541.300 kb on + strand at 3541.385 kb on + strand at 3541.385 kb on + strand at 3541.386 kb on - strand at 3541.442 kb on + strand at 3541.443 kb on - strand at 3541.516 kb on - strand at 3541.520 kb on + strand at 3541.556 kb on - strand, within Echvi_2964 at 3541.577 kb on + strand, within Echvi_2964 at 3541.577 kb on + strand, within Echvi_2964 at 3541.577 kb on + strand, within Echvi_2964 at 3541.577 kb on + strand, within Echvi_2964 at 3541.577 kb on + strand, within Echvi_2964 at 3541.578 kb on - strand, within Echvi_2964 at 3541.578 kb on - strand, within Echvi_2964 at 3541.582 kb on + strand, within Echvi_2964 at 3541.582 kb on + strand, within Echvi_2964 at 3541.595 kb on - strand, within Echvi_2964 at 3541.595 kb on - strand, within Echvi_2964 at 3541.598 kb on + strand, within Echvi_2964 at 3541.598 kb on + strand, within Echvi_2964 at 3541.599 kb on - strand, within Echvi_2964 at 3541.626 kb on - strand, within Echvi_2964 at 3541.633 kb on + strand, within Echvi_2964 at 3541.648 kb on + strand, within Echvi_2964 at 3541.667 kb on + strand, within Echvi_2964 at 3541.668 kb on - strand, within Echvi_2964 at 3541.685 kb on + strand, within Echvi_2964 at 3541.766 kb on + strand, within Echvi_2964 at 3541.766 kb on + strand, within Echvi_2964 at 3541.767 kb on - strand, within Echvi_2964 at 3541.767 kb on - strand, within Echvi_2964 at 3541.808 kb on - strand, within Echvi_2964 at 3541.820 kb on - strand, within Echvi_2964 at 3541.821 kb on + strand, within Echvi_2964 at 3541.821 kb on + strand, within Echvi_2964 at 3541.821 kb on + strand, within Echvi_2964 at 3541.872 kb on - strand, within Echvi_2964 at 3541.877 kb on + strand, within Echvi_2964 at 3541.878 kb on - strand, within Echvi_2964 at 3541.882 kb on - strand, within Echvi_2964 at 3541.919 kb on + strand, within Echvi_2964 at 3541.920 kb on - strand, within Echvi_2964 at 3541.982 kb on + strand, within Echvi_2964 at 3541.982 kb on + strand, within Echvi_2964 at 3541.982 kb on + strand, within Echvi_2964 at 3542.071 kb on + strand at 3542.099 kb on - strand at 3542.107 kb on - strand at 3542.110 kb on - strand at 3542.126 kb on - strand at 3542.140 kb on - strand at 3542.150 kb on - strand at 3542.150 kb on - strand at 3542.168 kb on - strand at 3542.168 kb on - strand at 3542.185 kb on + strand at 3542.265 kb on + strand at 3542.265 kb on + strand at 3542.303 kb on - strand at 3542.303 kb on - strand at 3542.344 kb on - strand at 3542.344 kb on - strand at 3542.366 kb on - strand at 3542.367 kb on + strand at 3542.368 kb on - strand at 3542.377 kb on + strand, within Echvi_2965 at 3542.377 kb on + strand, within Echvi_2965 at 3542.381 kb on + strand, within Echvi_2965 at 3542.381 kb on + strand, within Echvi_2965 at 3542.382 kb on - strand, within Echvi_2965 at 3542.417 kb on - strand, within Echvi_2965 at 3542.417 kb on - strand, within Echvi_2965 at 3542.506 kb on - strand, within Echvi_2965 at 3542.516 kb on - strand, within Echvi_2965 at 3542.516 kb on - strand, within Echvi_2965 at 3542.516 kb on - strand, within Echvi_2965 at 3542.635 kb on + strand, within Echvi_2965 at 3542.635 kb on + strand, within Echvi_2965 at 3542.636 kb on - strand, within Echvi_2965 at 3542.637 kb on + strand, within Echvi_2965 at 3542.637 kb on + strand, within Echvi_2965 at 3542.638 kb on - strand, within Echvi_2965 at 3542.655 kb on - strand, within Echvi_2965 at 3542.659 kb on + strand, within Echvi_2965 at 3542.721 kb on - strand, within Echvi_2965 at 3542.722 kb on + strand, within Echvi_2965 at 3542.722 kb on + strand, within Echvi_2965 at 3542.722 kb on + strand, within Echvi_2965 at 3542.723 kb on - strand, within Echvi_2965 at 3542.726 kb on + strand, within Echvi_2965 at 3542.726 kb on + strand, within Echvi_2965 at 3542.727 kb on - strand, within Echvi_2965 at 3542.727 kb on - strand, within Echvi_2965 at 3542.737 kb on - strand, within Echvi_2965 at 3542.776 kb on + strand, within Echvi_2965 at 3542.870 kb on + strand, within Echvi_2965 at 3542.870 kb on + strand, within Echvi_2965 at 3542.873 kb on + strand, within Echvi_2965 at 3542.875 kb on + strand, within Echvi_2965 at 3542.875 kb on + strand, within Echvi_2965 at 3542.875 kb on + strand, within Echvi_2965 at 3542.876 kb on - strand, within Echvi_2965 at 3542.876 kb on - strand, within Echvi_2965 at 3542.876 kb on - strand, within Echvi_2965 at 3542.876 kb on - strand, within Echvi_2965 at 3542.906 kb on + strand, within Echvi_2965 at 3542.906 kb on + strand, within Echvi_2965 at 3542.906 kb on + strand, within Echvi_2965 at 3542.906 kb on + strand, within Echvi_2965 at 3542.907 kb on - strand, within Echvi_2965 at 3542.907 kb on - strand, within Echvi_2965 at 3542.907 kb on - strand, within Echvi_2965 at 3542.907 kb on - strand, within Echvi_2965 at 3542.911 kb on - strand, within Echvi_2965 at 3542.911 kb on - strand, within Echvi_2965 at 3542.911 kb on - strand, within Echvi_2965 at 3543.008 kb on + strand, within Echvi_2965 at 3543.013 kb on + strand, within Echvi_2965 at 3543.014 kb on - strand, within Echvi_2965 at 3543.025 kb on + strand, within Echvi_2965 at 3543.026 kb on - strand, within Echvi_2965 at 3543.069 kb on - strand, within Echvi_2965 at 3543.069 kb on - strand, within Echvi_2965 at 3543.079 kb on + strand, within Echvi_2965 at 3543.080 kb on - strand, within Echvi_2965 at 3543.113 kb on + strand, within Echvi_2965 at 3543.142 kb on + strand, within Echvi_2965 at 3543.162 kb on + strand, within Echvi_2965 at 3543.163 kb on - strand, within Echvi_2965 at 3543.165 kb on - strand, within Echvi_2965 at 3543.165 kb on - strand, within Echvi_2965 at 3543.167 kb on + strand, within Echvi_2965 at 3543.167 kb on + strand, within Echvi_2965 at 3543.168 kb on - strand, within Echvi_2965 at 3543.168 kb on - strand, within Echvi_2965 at 3543.173 kb on + strand, within Echvi_2965 at 3543.227 kb on - strand, within Echvi_2965 at 3543.231 kb on + strand, within Echvi_2965 at 3543.231 kb on + strand, within Echvi_2965 at 3543.232 kb on - strand, within Echvi_2965 at 3543.247 kb on + strand, within Echvi_2965 at 3543.247 kb on + strand, within Echvi_2965 at 3543.248 kb on - strand, within Echvi_2965 at 3543.282 kb on - strand at 3543.315 kb on - strand at 3543.322 kb on + strand at 3543.353 kb on - strand at 3543.397 kb on - strand at 3543.419 kb on - strand at 3543.466 kb on - strand at 3543.472 kb on + strand at 3543.506 kb on - strand at 3543.506 kb on - strand at 3543.518 kb on + strand at 3543.535 kb on - strand at 3543.599 kb on - strand at 3543.666 kb on + strand, within Echvi_2966 at 3543.666 kb on + strand, within Echvi_2966 at 3543.669 kb on + strand, within Echvi_2966 at 3543.670 kb on - strand, within Echvi_2966 at 3543.673 kb on - strand, within Echvi_2966 at 3543.675 kb on + strand, within Echvi_2966 at 3543.675 kb on + strand, within Echvi_2966 at 3543.676 kb on - strand, within Echvi_2966 at 3543.688 kb on + strand, within Echvi_2966 at 3543.688 kb on + strand, within Echvi_2966 at 3543.689 kb on - strand, within Echvi_2966 at 3543.706 kb on - strand, within Echvi_2966 at 3543.710 kb on - strand, within Echvi_2966 at 3543.718 kb on - strand, within Echvi_2966 at 3543.751 kb on - strand, within Echvi_2966 at 3543.782 kb on - strand, within Echvi_2966 at 3543.800 kb on - strand, within Echvi_2966 at 3543.813 kb on + strand, within Echvi_2966 at 3543.814 kb on - strand, within Echvi_2966 at 3543.814 kb on - strand, within Echvi_2966 at 3543.844 kb on + strand, within Echvi_2966 at 3543.850 kb on - strand, within Echvi_2966 at 3543.865 kb on + strand, within Echvi_2966 at 3543.866 kb on - strand, within Echvi_2966 at 3543.886 kb on + strand, within Echvi_2966 at 3543.939 kb on - strand, within Echvi_2966 at 3543.986 kb on + strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3544.010 kb on - strand, within Echvi_2966 at 3544.060 kb on + strand, within Echvi_2966 at 3544.062 kb on + strand, within Echvi_2966 at 3544.062 kb on + strand, within Echvi_2966 at 3544.128 kb on - strand, within Echvi_2966 at 3544.158 kb on + strand, within Echvi_2966 at 3544.158 kb on + strand, within Echvi_2966 at 3544.159 kb on - strand, within Echvi_2966 at 3544.159 kb on - strand, within Echvi_2966 at 3544.159 kb on - strand, within Echvi_2966 at 3544.173 kb on - strand, within Echvi_2966 at 3544.203 kb on + strand, within Echvi_2966 at 3544.207 kb on + strand, within Echvi_2966 at 3544.228 kb on + strand, within Echvi_2966 at 3544.228 kb on + strand, within Echvi_2966 at 3544.229 kb on - strand, within Echvi_2966 at 3544.229 kb on - strand, within Echvi_2966 at 3544.229 kb on - strand, within Echvi_2966 at 3544.265 kb on - strand, within Echvi_2966 at 3544.278 kb on + strand, within Echvi_2966 at 3544.317 kb on - strand, within Echvi_2966 at 3544.339 kb on + strand, within Echvi_2966 at 3544.357 kb on + strand, within Echvi_2966 at 3544.358 kb on - strand, within Echvi_2966
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,541,265 + +1.9 3,541,266 - -0.9 3,541,274 - -0.0 3,541,300 + +0.0 3,541,385 + +0.1 3,541,385 + -1.1 3,541,386 - -0.2 3,541,442 + -0.5 3,541,443 - -0.7 3,541,516 - -0.8 3,541,520 + -0.6 3,541,556 - Echvi_2964 0.13 -0.4 3,541,577 + Echvi_2964 0.17 +2.2 3,541,577 + Echvi_2964 0.17 -0.4 3,541,577 + Echvi_2964 0.17 -1.0 3,541,577 + Echvi_2964 0.17 -0.9 3,541,577 + Echvi_2964 0.17 +0.9 3,541,578 - Echvi_2964 0.17 +0.2 3,541,578 - Echvi_2964 0.17 +0.2 3,541,582 + Echvi_2964 0.18 -0.5 3,541,582 + Echvi_2964 0.18 -0.4 3,541,595 - Echvi_2964 0.20 -2.2 3,541,595 - Echvi_2964 0.20 +0.3 3,541,598 + Echvi_2964 0.20 -1.1 3,541,598 + Echvi_2964 0.20 -1.2 3,541,599 - Echvi_2964 0.21 -0.5 3,541,626 - Echvi_2964 0.25 +0.4 3,541,633 + Echvi_2964 0.26 +0.1 3,541,648 + Echvi_2964 0.29 +0.0 3,541,667 + Echvi_2964 0.32 +0.2 3,541,668 - Echvi_2964 0.32 +0.3 3,541,685 + Echvi_2964 0.35 -1.9 3,541,766 + Echvi_2964 0.49 -0.0 3,541,766 + Echvi_2964 0.49 -1.0 3,541,767 - Echvi_2964 0.49 -0.2 3,541,767 - Echvi_2964 0.49 -1.1 3,541,808 - Echvi_2964 0.56 +0.0 3,541,820 - Echvi_2964 0.58 +1.0 3,541,821 + Echvi_2964 0.58 -0.2 3,541,821 + Echvi_2964 0.58 +0.5 3,541,821 + Echvi_2964 0.58 +0.3 3,541,872 - Echvi_2964 0.67 +0.8 3,541,877 + Echvi_2964 0.68 +0.2 3,541,878 - Echvi_2964 0.68 +0.0 3,541,882 - Echvi_2964 0.69 +0.2 3,541,919 + Echvi_2964 0.75 -0.5 3,541,920 - Echvi_2964 0.75 -1.2 3,541,982 + Echvi_2964 0.86 -2.1 3,541,982 + Echvi_2964 0.86 +0.1 3,541,982 + Echvi_2964 0.86 -0.3 3,542,071 + -0.9 3,542,099 - -0.4 3,542,107 - -1.7 3,542,110 - +0.2 3,542,126 - -0.6 3,542,140 - +1.4 3,542,150 - -0.9 3,542,150 - -1.4 3,542,168 - -0.5 3,542,168 - -0.3 3,542,185 + -0.8 3,542,265 + -0.8 3,542,265 + +0.4 3,542,303 - +0.1 3,542,303 - -0.7 3,542,344 - -2.9 3,542,344 - +0.4 3,542,366 - -0.2 3,542,367 + +0.0 3,542,368 - +0.8 3,542,377 + Echvi_2965 0.10 +0.2 3,542,377 + Echvi_2965 0.10 -0.3 3,542,381 + Echvi_2965 0.11 +1.6 3,542,381 + Echvi_2965 0.11 +0.1 3,542,382 - Echvi_2965 0.11 -0.3 3,542,417 - Echvi_2965 0.14 -0.4 3,542,417 - Echvi_2965 0.14 +0.1 3,542,506 - Echvi_2965 0.22 -0.1 3,542,516 - Echvi_2965 0.23 +0.6 3,542,516 - Echvi_2965 0.23 -0.4 3,542,516 - Echvi_2965 0.23 +0.8 3,542,635 + Echvi_2965 0.34 +0.9 3,542,635 + Echvi_2965 0.34 -0.3 3,542,636 - Echvi_2965 0.34 -0.0 3,542,637 + Echvi_2965 0.34 -0.5 3,542,637 + Echvi_2965 0.34 +0.9 3,542,638 - Echvi_2965 0.34 +1.2 3,542,655 - Echvi_2965 0.35 +0.1 3,542,659 + Echvi_2965 0.36 -0.5 3,542,721 - Echvi_2965 0.41 +0.6 3,542,722 + Echvi_2965 0.41 +0.2 3,542,722 + Echvi_2965 0.41 -0.7 3,542,722 + Echvi_2965 0.41 +0.7 3,542,723 - Echvi_2965 0.41 -0.4 3,542,726 + Echvi_2965 0.42 -0.5 3,542,726 + Echvi_2965 0.42 +0.6 3,542,727 - Echvi_2965 0.42 -0.8 3,542,727 - Echvi_2965 0.42 +0.2 3,542,737 - Echvi_2965 0.43 +0.1 3,542,776 + Echvi_2965 0.46 -1.2 3,542,870 + Echvi_2965 0.55 -0.3 3,542,870 + Echvi_2965 0.55 +0.2 3,542,873 + Echvi_2965 0.55 +0.2 3,542,875 + Echvi_2965 0.55 +1.5 3,542,875 + Echvi_2965 0.55 -0.4 3,542,875 + Echvi_2965 0.55 +1.4 3,542,876 - Echvi_2965 0.55 -0.4 3,542,876 - Echvi_2965 0.55 +0.2 3,542,876 - Echvi_2965 0.55 +2.4 3,542,876 - Echvi_2965 0.55 -0.7 3,542,906 + Echvi_2965 0.58 -0.0 3,542,906 + Echvi_2965 0.58 -1.9 3,542,906 + Echvi_2965 0.58 -0.4 3,542,906 + Echvi_2965 0.58 -0.6 3,542,907 - Echvi_2965 0.58 -0.4 3,542,907 - Echvi_2965 0.58 +0.2 3,542,907 - Echvi_2965 0.58 +0.6 3,542,907 - Echvi_2965 0.58 +0.3 3,542,911 - Echvi_2965 0.58 +0.6 3,542,911 - Echvi_2965 0.58 +0.4 3,542,911 - Echvi_2965 0.58 -0.0 3,543,008 + Echvi_2965 0.67 +0.0 3,543,013 + Echvi_2965 0.68 +0.6 3,543,014 - Echvi_2965 0.68 -0.1 3,543,025 + Echvi_2965 0.69 -2.1 3,543,026 - Echvi_2965 0.69 -1.0 3,543,069 - Echvi_2965 0.73 +0.2 3,543,069 - Echvi_2965 0.73 -0.5 3,543,079 + Echvi_2965 0.74 -0.2 3,543,080 - Echvi_2965 0.74 +0.0 3,543,113 + Echvi_2965 0.77 -1.1 3,543,142 + Echvi_2965 0.79 -0.4 3,543,162 + Echvi_2965 0.81 -0.0 3,543,163 - Echvi_2965 0.81 +0.1 3,543,165 - Echvi_2965 0.81 +0.5 3,543,165 - Echvi_2965 0.81 +0.1 3,543,167 + Echvi_2965 0.82 -0.8 3,543,167 + Echvi_2965 0.82 -1.8 3,543,168 - Echvi_2965 0.82 +0.5 3,543,168 - Echvi_2965 0.82 +0.2 3,543,173 + Echvi_2965 0.82 +0.0 3,543,227 - Echvi_2965 0.87 -0.5 3,543,231 + Echvi_2965 0.87 +0.2 3,543,231 + Echvi_2965 0.87 -0.5 3,543,232 - Echvi_2965 0.87 +0.0 3,543,247 + Echvi_2965 0.89 +0.3 3,543,247 + Echvi_2965 0.89 -0.6 3,543,248 - Echvi_2965 0.89 -1.5 3,543,282 - -1.4 3,543,315 - -0.2 3,543,322 + -0.0 3,543,353 - -0.3 3,543,397 - +2.6 3,543,419 - +1.2 3,543,466 - -0.4 3,543,472 + +0.3 3,543,506 - +0.3 3,543,506 - -0.1 3,543,518 + +0.2 3,543,535 - -1.6 3,543,599 - -1.1 3,543,666 + Echvi_2966 0.16 -0.6 3,543,666 + Echvi_2966 0.16 -0.3 3,543,669 + Echvi_2966 0.16 +0.1 3,543,670 - Echvi_2966 0.16 -0.3 3,543,673 - Echvi_2966 0.17 -0.1 3,543,675 + Echvi_2966 0.17 +0.2 3,543,675 + Echvi_2966 0.17 -1.0 3,543,676 - Echvi_2966 0.17 +0.6 3,543,688 + Echvi_2966 0.18 -0.7 3,543,688 + Echvi_2966 0.18 +0.1 3,543,689 - Echvi_2966 0.18 +0.5 3,543,706 - Echvi_2966 0.20 +0.2 3,543,710 - Echvi_2966 0.20 -0.3 3,543,718 - Echvi_2966 0.21 +0.8 3,543,751 - Echvi_2966 0.24 +1.0 3,543,782 - Echvi_2966 0.27 -0.4 3,543,800 - Echvi_2966 0.29 -0.8 3,543,813 + Echvi_2966 0.30 -0.9 3,543,814 - Echvi_2966 0.30 -0.5 3,543,814 - Echvi_2966 0.30 +0.1 3,543,844 + Echvi_2966 0.33 -0.4 3,543,850 - Echvi_2966 0.34 +0.6 3,543,865 + Echvi_2966 0.35 -1.1 3,543,866 - Echvi_2966 0.35 +1.0 3,543,886 + Echvi_2966 0.37 -0.4 3,543,939 - Echvi_2966 0.42 +0.6 3,543,986 + Echvi_2966 0.47 -0.2 3,543,987 - Echvi_2966 0.47 +0.4 3,543,987 - Echvi_2966 0.47 -0.7 3,543,987 - Echvi_2966 0.47 +1.1 3,543,987 - Echvi_2966 0.47 +1.2 3,543,987 - Echvi_2966 0.47 +0.8 3,544,010 - Echvi_2966 0.49 +0.1 3,544,060 + Echvi_2966 0.54 +0.9 3,544,062 + Echvi_2966 0.54 +1.4 3,544,062 + Echvi_2966 0.54 -0.2 3,544,128 - Echvi_2966 0.60 -0.9 3,544,158 + Echvi_2966 0.63 +0.8 3,544,158 + Echvi_2966 0.63 -1.8 3,544,159 - Echvi_2966 0.63 +2.6 3,544,159 - Echvi_2966 0.63 -0.9 3,544,159 - Echvi_2966 0.63 +0.1 3,544,173 - Echvi_2966 0.65 +0.4 3,544,203 + Echvi_2966 0.68 +0.2 3,544,207 + Echvi_2966 0.68 -0.4 3,544,228 + Echvi_2966 0.70 +0.1 3,544,228 + Echvi_2966 0.70 +0.2 3,544,229 - Echvi_2966 0.70 +0.4 3,544,229 - Echvi_2966 0.70 +0.9 3,544,229 - Echvi_2966 0.70 +1.0 3,544,265 - Echvi_2966 0.74 -0.1 3,544,278 + Echvi_2966 0.75 +0.5 3,544,317 - Echvi_2966 0.79 -0.2 3,544,339 + Echvi_2966 0.81 -0.7 3,544,357 + Echvi_2966 0.82 +1.5 3,544,358 - Echvi_2966 0.83 +0.3
Or see this region's nucleotide sequence