Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2529

Experiment: m.b. Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cisplatin 0.025 mg/ml
3,001,912	-		Echvi_2527	0.79	-1.6
3,001,970	-				-2.9
3,001,970	-				-0.3
3,001,999	+				-1.2
3,002,036	-				-0.2
3,002,052	+				-2.3
3,002,052	+				-1.1
3,002,123	-				+0.2
3,002,543	-				+0.9
3,002,572	-				+1.6
3,002,572	-				-0.2
3,002,597	+				-1.8
3,002,668	+				+0.4
3,002,668	+				-1.0
3,002,669	-				+0.6
3,002,707	+				-0.7
3,002,707	+				-1.3
3,002,708	-				-1.2
3,002,721	-				-0.4
3,002,721	-				+0.4
3,002,761	-				+2.0
3,002,809	+				+1.1
3,002,810	-				-2.6
3,002,810	-				-1.8
3,002,851	-				+0.1
3,002,862	-				-0.5
3,002,866	-				+0.5
3,002,866	-				+0.6
3,002,879	+				-0.7
3,002,886	-				-0.7
3,002,919	+				+0.4
3,002,919	+				+0.9
3,002,919	+				-2.0
3,002,994	+				+0.1
3,002,996	+				+0.5
3,003,016	+		Echvi_2529	0.11	+0.1
3,003,017	-		Echvi_2529	0.12	-0.9
3,003,205	+		Echvi_2529	0.30	-1.8
3,003,206	-		Echvi_2529	0.30	+1.0
3,003,206	-		Echvi_2529	0.30	-1.4
3,003,206	-		Echvi_2529	0.30	-0.8
3,003,224	-		Echvi_2529	0.32	-1.3
3,003,247	+		Echvi_2529	0.34	-1.7
3,003,248	-		Echvi_2529	0.34	-1.2
3,003,275	-		Echvi_2529	0.37	-0.4
3,003,318	+		Echvi_2529	0.41	+0.1
3,003,335	+		Echvi_2529	0.43	-0.7
3,003,381	-		Echvi_2529	0.47	+0.5
3,003,402	+		Echvi_2529	0.49	+0.5
3,003,402	+		Echvi_2529	0.49	+1.1
3,003,491	+		Echvi_2529	0.58	-0.7
3,003,492	-		Echvi_2529	0.58	+1.6
3,003,492	-		Echvi_2529	0.58	-0.3
3,003,550	-		Echvi_2529	0.64	+0.6
3,003,580	+		Echvi_2529	0.67	-1.6
3,003,580	+		Echvi_2529	0.67	-1.2
3,003,580	+		Echvi_2529	0.67	-1.0
3,003,580	+		Echvi_2529	0.67	+0.5
3,003,601	+		Echvi_2529	0.69	-0.2
3,003,601	+		Echvi_2529	0.69	-0.6
3,003,605	+		Echvi_2529	0.69	-1.6
3,003,614	-		Echvi_2529	0.70	-1.6
3,003,614	-		Echvi_2529	0.70	+3.0
3,003,618	-		Echvi_2529	0.71	-2.4
3,003,624	-		Echvi_2529	0.71	+1.2
3,003,624	-		Echvi_2529	0.71	+1.1
3,003,638	+		Echvi_2529	0.73	+0.1
3,003,638	+		Echvi_2529	0.73	-0.3
3,003,639	-		Echvi_2529	0.73	-1.0
3,003,723	+		Echvi_2529	0.81	-0.3
3,003,723	+		Echvi_2529	0.81	-0.8
3,003,723	+		Echvi_2529	0.81	-0.0
3,003,724	-		Echvi_2529	0.81	-0.4
3,003,725	+		Echvi_2529	0.81	+0.3
3,003,726	-		Echvi_2529	0.81	-0.9
3,003,726	-		Echvi_2529	0.81	-1.0
3,003,729	-		Echvi_2529	0.82	-0.5
3,003,737	+		Echvi_2529	0.82	+0.4
3,003,737	+		Echvi_2529	0.82	-0.3
3,003,763	+		Echvi_2529	0.85	-0.4
3,003,805	+		Echvi_2529	0.89	-0.3
3,003,806	-		Echvi_2529	0.89	-0.0
3,003,869	+				-1.1
3,003,909	+				+0.2
3,003,910	-				-1.3
3,003,930	+				+0.7
3,003,931	-				-0.1
3,003,987	+				+1.5
3,003,988	-				+0.2
3,003,993	-				+0.1
3,003,993	-				-0.1
3,004,084	+				+1.0
3,004,085	-				-1.4
3,004,138	+				-0.3
3,004,139	-				+0.2
3,004,346	-		Echvi_2530	0.25	+0.1
3,004,368	+		Echvi_2530	0.27	-0.2
3,004,368	+		Echvi_2530	0.27	+0.8
3,004,368	+		Echvi_2530	0.27	+0.8
3,004,368	+		Echvi_2530	0.27	-0.1
3,004,426	+		Echvi_2530	0.32	-0.3
3,004,427	-		Echvi_2530	0.32	-0.0
3,004,427	-		Echvi_2530	0.32	+0.2
3,004,427	-		Echvi_2530	0.32	+0.1
3,004,572	+		Echvi_2530	0.43	-1.8
3,004,572	+		Echvi_2530	0.43	-0.2
3,004,572	+		Echvi_2530	0.43	+0.6
3,004,572	+		Echvi_2530	0.43	-0.2
3,004,572	+		Echvi_2530	0.43	-0.0
3,004,573	-		Echvi_2530	0.43	+0.5
3,004,588	-		Echvi_2530	0.44	-1.7
3,004,657	+		Echvi_2530	0.49	+0.6
3,004,796	-		Echvi_2530	0.60	+1.5
3,004,799	-		Echvi_2530	0.60	-1.1
3,004,799	-		Echvi_2530	0.60	+0.7
3,004,809	-		Echvi_2530	0.61	-1.0