Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2296 and Echvi_2297 are separated by 103 nucleotides Echvi_2297 and Echvi_2298 are separated by 370 nucleotides Echvi_2298 and Echvi_2299 are separated by 31 nucleotides
Echvi_2296: Echvi_2296 - Arabinose efflux permease, at 2,718,867 to 2,720,048
_2296
Echvi_2297: Echvi_2297 - methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain, at 2,720,152 to 2,722,212
_2297
Echvi_2298: Echvi_2298 - hypothetical protein, at 2,722,583 to 2,722,810
_2298
Echvi_2299: Echvi_2299 - Phosphopantetheinyl transferase, at 2,722,842 to 2,723,618
_2299
Position (kb)
2720
2721
2722
2723 Strain fitness (log2 ratio)
-1
0
1 at 2719.243 kb on - strand, within Echvi_2296 at 2719.244 kb on + strand, within Echvi_2296 at 2719.253 kb on + strand, within Echvi_2296 at 2719.253 kb on + strand, within Echvi_2296 at 2719.286 kb on - strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.520 kb on + strand, within Echvi_2296 at 2719.521 kb on - strand, within Echvi_2296 at 2719.542 kb on + strand, within Echvi_2296 at 2719.555 kb on + strand, within Echvi_2296 at 2719.556 kb on - strand, within Echvi_2296 at 2719.591 kb on - strand, within Echvi_2296 at 2719.591 kb on - strand, within Echvi_2296 at 2719.649 kb on + strand, within Echvi_2296 at 2719.649 kb on + strand, within Echvi_2296 at 2719.650 kb on - strand, within Echvi_2296 at 2719.759 kb on + strand, within Echvi_2296 at 2719.799 kb on + strand, within Echvi_2296 at 2719.800 kb on - strand, within Echvi_2296 at 2719.905 kb on - strand, within Echvi_2296 at 2719.965 kb on - strand at 2719.985 kb on + strand at 2720.008 kb on - strand at 2720.066 kb on + strand at 2721.821 kb on + strand, within Echvi_2297 at 2721.864 kb on + strand, within Echvi_2297 at 2721.893 kb on + strand, within Echvi_2297 at 2721.893 kb on + strand, within Echvi_2297 at 2722.211 kb on - strand at 2722.219 kb on + strand at 2722.220 kb on - strand at 2722.327 kb on - strand at 2722.333 kb on + strand at 2722.343 kb on - strand at 2722.343 kb on - strand at 2722.345 kb on - strand at 2722.345 kb on - strand at 2722.422 kb on - strand at 2722.446 kb on - strand at 2722.558 kb on + strand at 2722.558 kb on + strand at 2722.558 kb on + strand at 2722.603 kb on + strand at 2722.718 kb on - strand, within Echvi_2298 at 2722.729 kb on + strand, within Echvi_2298 at 2722.777 kb on + strand, within Echvi_2298 at 2722.808 kb on + strand at 2722.841 kb on - strand at 2722.900 kb on + strand at 2722.901 kb on - strand at 2722.953 kb on + strand, within Echvi_2299 at 2722.953 kb on + strand, within Echvi_2299 at 2722.960 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.968 kb on - strand, within Echvi_2299 at 2722.968 kb on - strand, within Echvi_2299 at 2722.970 kb on - strand, within Echvi_2299 at 2723.020 kb on - strand, within Echvi_2299 at 2723.048 kb on + strand, within Echvi_2299 at 2723.063 kb on + strand, within Echvi_2299 at 2723.142 kb on + strand, within Echvi_2299
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,719,243 - Echvi_2296 0.32 +0.3 2,719,244 + Echvi_2296 0.32 -1.4 2,719,253 + Echvi_2296 0.33 -0.2 2,719,253 + Echvi_2296 0.33 +1.2 2,719,286 - Echvi_2296 0.35 -0.5 2,719,520 + Echvi_2296 0.55 +1.4 2,719,520 + Echvi_2296 0.55 -0.9 2,719,520 + Echvi_2296 0.55 -0.3 2,719,520 + Echvi_2296 0.55 -0.3 2,719,520 + Echvi_2296 0.55 -0.4 2,719,521 - Echvi_2296 0.55 -0.3 2,719,542 + Echvi_2296 0.57 +0.1 2,719,555 + Echvi_2296 0.58 +0.3 2,719,556 - Echvi_2296 0.58 +0.6 2,719,591 - Echvi_2296 0.61 +0.1 2,719,591 - Echvi_2296 0.61 -1.1 2,719,649 + Echvi_2296 0.66 +0.1 2,719,649 + Echvi_2296 0.66 +0.5 2,719,650 - Echvi_2296 0.66 -0.8 2,719,759 + Echvi_2296 0.75 +0.1 2,719,799 + Echvi_2296 0.79 +0.4 2,719,800 - Echvi_2296 0.79 -0.7 2,719,905 - Echvi_2296 0.88 +0.3 2,719,965 - +1.0 2,719,985 + +0.0 2,720,008 - -0.3 2,720,066 + +0.5 2,721,821 + Echvi_2297 0.81 -0.5 2,721,864 + Echvi_2297 0.83 -0.6 2,721,893 + Echvi_2297 0.84 -0.3 2,721,893 + Echvi_2297 0.84 -1.1 2,722,211 - -1.1 2,722,219 + -0.4 2,722,220 - -0.0 2,722,327 - -0.5 2,722,333 + -0.5 2,722,343 - -0.7 2,722,343 - -0.0 2,722,345 - +0.9 2,722,345 - +0.7 2,722,422 - -0.2 2,722,446 - +0.3 2,722,558 + +0.6 2,722,558 + +0.3 2,722,558 + +0.6 2,722,603 + +0.5 2,722,718 - Echvi_2298 0.59 -0.2 2,722,729 + Echvi_2298 0.64 +1.3 2,722,777 + Echvi_2298 0.85 +1.1 2,722,808 + -1.3 2,722,841 - -0.3 2,722,900 + +0.2 2,722,901 - -0.2 2,722,953 + Echvi_2299 0.14 -0.3 2,722,953 + Echvi_2299 0.14 -1.0 2,722,960 + Echvi_2299 0.15 -0.1 2,722,967 + Echvi_2299 0.16 +0.4 2,722,967 + Echvi_2299 0.16 +0.2 2,722,967 + Echvi_2299 0.16 +0.2 2,722,968 - Echvi_2299 0.16 -0.7 2,722,968 - Echvi_2299 0.16 +0.6 2,722,970 - Echvi_2299 0.16 -0.0 2,723,020 - Echvi_2299 0.23 +0.3 2,723,048 + Echvi_2299 0.27 +0.0 2,723,063 + Echvi_2299 0.28 +0.8 2,723,142 + Echvi_2299 0.39 -0.8
Or see this region's nucleotide sequence