Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1734 and Echvi_1735 are separated by 302 nucleotides Echvi_1735 and Echvi_1736 are separated by 89 nucleotides Echvi_1736 and Echvi_1737 are separated by 31 nucleotides
Echvi_1734: Echvi_1734 - Cystathionine beta-lyases/cystathionine gamma-synthases, at 2,042,644 to 2,043,753
_1734
Echvi_1735: Echvi_1735 - Mg chelatase-related protein, at 2,044,056 to 2,045,594
_1735
Echvi_1736: Echvi_1736 - hypothetical protein, at 2,045,684 to 2,046,064
_1736
Echvi_1737: Echvi_1737 - ABC-type multidrug transport system, ATPase and permease components, at 2,046,096 to 2,047,931
_1737
Position (kb)
2044
2045
2046 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2043.060 kb on + strand, within Echvi_1734 at 2043.120 kb on + strand, within Echvi_1734 at 2043.142 kb on - strand, within Echvi_1734 at 2043.142 kb on - strand, within Echvi_1734 at 2043.215 kb on - strand, within Echvi_1734 at 2043.235 kb on - strand, within Echvi_1734 at 2043.338 kb on - strand, within Echvi_1734 at 2043.338 kb on - strand, within Echvi_1734 at 2043.519 kb on - strand, within Echvi_1734 at 2043.558 kb on + strand, within Echvi_1734 at 2043.563 kb on + strand, within Echvi_1734 at 2043.576 kb on - strand, within Echvi_1734 at 2043.602 kb on + strand, within Echvi_1734 at 2043.752 kb on - strand at 2043.854 kb on + strand at 2043.854 kb on + strand at 2043.912 kb on - strand at 2043.986 kb on + strand at 2044.042 kb on + strand at 2044.042 kb on + strand at 2044.043 kb on - strand at 2044.201 kb on - strand at 2044.305 kb on - strand, within Echvi_1735 at 2044.305 kb on - strand, within Echvi_1735 at 2044.449 kb on + strand, within Echvi_1735 at 2044.449 kb on + strand, within Echvi_1735 at 2044.462 kb on - strand, within Echvi_1735 at 2044.462 kb on - strand, within Echvi_1735 at 2044.525 kb on + strand, within Echvi_1735 at 2044.698 kb on - strand, within Echvi_1735 at 2044.766 kb on + strand, within Echvi_1735 at 2044.767 kb on - strand, within Echvi_1735 at 2044.991 kb on + strand, within Echvi_1735 at 2045.026 kb on + strand, within Echvi_1735 at 2045.039 kb on + strand, within Echvi_1735 at 2045.086 kb on - strand, within Echvi_1735 at 2045.086 kb on - strand, within Echvi_1735 at 2045.086 kb on - strand, within Echvi_1735 at 2045.098 kb on - strand, within Echvi_1735 at 2045.136 kb on + strand, within Echvi_1735 at 2045.148 kb on - strand, within Echvi_1735 at 2045.156 kb on + strand, within Echvi_1735 at 2045.156 kb on + strand, within Echvi_1735 at 2045.156 kb on + strand, within Echvi_1735 at 2045.156 kb on + strand, within Echvi_1735 at 2045.156 kb on + strand, within Echvi_1735 at 2045.157 kb on - strand, within Echvi_1735 at 2045.221 kb on - strand, within Echvi_1735 at 2045.222 kb on + strand, within Echvi_1735 at 2045.223 kb on - strand, within Echvi_1735 at 2045.271 kb on + strand, within Echvi_1735 at 2045.271 kb on + strand, within Echvi_1735 at 2045.290 kb on + strand, within Echvi_1735 at 2045.291 kb on - strand, within Echvi_1735 at 2045.291 kb on - strand, within Echvi_1735 at 2045.291 kb on - strand, within Echvi_1735 at 2045.291 kb on - strand, within Echvi_1735 at 2045.310 kb on + strand, within Echvi_1735 at 2045.442 kb on + strand at 2045.504 kb on - strand at 2045.529 kb on + strand at 2045.530 kb on - strand at 2045.536 kb on - strand at 2045.573 kb on + strand at 2045.574 kb on - strand at 2045.574 kb on - strand at 2045.574 kb on - strand at 2045.574 kb on - strand at 2045.574 kb on - strand at 2045.578 kb on + strand at 2045.579 kb on - strand at 2045.579 kb on - strand at 2045.579 kb on - strand at 2045.579 kb on - strand at 2045.661 kb on + strand at 2045.661 kb on + strand at 2045.662 kb on - strand at 2045.664 kb on - strand at 2045.773 kb on + strand, within Echvi_1736 at 2045.774 kb on - strand, within Echvi_1736 at 2045.819 kb on + strand, within Echvi_1736 at 2045.819 kb on + strand, within Echvi_1736 at 2045.840 kb on + strand, within Echvi_1736 at 2045.866 kb on + strand, within Echvi_1736 at 2045.875 kb on - strand, within Echvi_1736 at 2045.896 kb on + strand, within Echvi_1736 at 2046.012 kb on - strand, within Echvi_1736 at 2046.054 kb on - strand at 2046.065 kb on - strand at 2046.070 kb on + strand at 2046.071 kb on - strand at 2046.076 kb on + strand at 2046.076 kb on + strand at 2046.092 kb on + strand at 2046.092 kb on + strand at 2046.110 kb on + strand at 2046.144 kb on + strand at 2046.145 kb on - strand at 2046.255 kb on - strand at 2046.333 kb on + strand, within Echvi_1737 at 2046.342 kb on - strand, within Echvi_1737 at 2046.342 kb on - strand, within Echvi_1737 at 2046.374 kb on + strand, within Echvi_1737 at 2046.374 kb on + strand, within Echvi_1737 at 2046.374 kb on + strand, within Echvi_1737 at 2046.405 kb on - strand, within Echvi_1737 at 2046.405 kb on - strand, within Echvi_1737 at 2046.454 kb on - strand, within Echvi_1737 at 2046.490 kb on - strand, within Echvi_1737 at 2046.531 kb on - strand, within Echvi_1737
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,043,060 + Echvi_1734 0.37 -0.4 2,043,120 + Echvi_1734 0.43 +1.0 2,043,142 - Echvi_1734 0.45 -0.5 2,043,142 - Echvi_1734 0.45 +1.6 2,043,215 - Echvi_1734 0.51 -0.5 2,043,235 - Echvi_1734 0.53 +1.6 2,043,338 - Echvi_1734 0.63 -0.2 2,043,338 - Echvi_1734 0.63 +0.4 2,043,519 - Echvi_1734 0.79 -0.1 2,043,558 + Echvi_1734 0.82 -0.5 2,043,563 + Echvi_1734 0.83 -0.7 2,043,576 - Echvi_1734 0.84 -0.3 2,043,602 + Echvi_1734 0.86 -0.0 2,043,752 - +0.9 2,043,854 + -0.0 2,043,854 + -1.2 2,043,912 - +0.3 2,043,986 + -0.3 2,044,042 + +0.8 2,044,042 + +0.3 2,044,043 - -0.3 2,044,201 - -0.2 2,044,305 - Echvi_1735 0.16 -0.3 2,044,305 - Echvi_1735 0.16 +0.0 2,044,449 + Echvi_1735 0.26 +2.5 2,044,449 + Echvi_1735 0.26 -0.2 2,044,462 - Echvi_1735 0.26 +0.8 2,044,462 - Echvi_1735 0.26 -1.0 2,044,525 + Echvi_1735 0.30 +0.7 2,044,698 - Echvi_1735 0.42 +0.4 2,044,766 + Echvi_1735 0.46 +0.8 2,044,767 - Echvi_1735 0.46 +1.4 2,044,991 + Echvi_1735 0.61 +0.7 2,045,026 + Echvi_1735 0.63 +0.6 2,045,039 + Echvi_1735 0.64 -0.1 2,045,086 - Echvi_1735 0.67 +0.2 2,045,086 - Echvi_1735 0.67 -0.1 2,045,086 - Echvi_1735 0.67 +0.1 2,045,098 - Echvi_1735 0.68 +0.3 2,045,136 + Echvi_1735 0.70 +1.0 2,045,148 - Echvi_1735 0.71 +0.9 2,045,156 + Echvi_1735 0.71 -0.1 2,045,156 + Echvi_1735 0.71 +0.1 2,045,156 + Echvi_1735 0.71 +0.2 2,045,156 + Echvi_1735 0.71 -1.3 2,045,156 + Echvi_1735 0.71 -1.5 2,045,157 - Echvi_1735 0.72 +0.2 2,045,221 - Echvi_1735 0.76 +2.4 2,045,222 + Echvi_1735 0.76 +0.9 2,045,223 - Echvi_1735 0.76 -0.3 2,045,271 + Echvi_1735 0.79 +1.2 2,045,271 + Echvi_1735 0.79 +0.6 2,045,290 + Echvi_1735 0.80 +0.3 2,045,291 - Echvi_1735 0.80 +0.1 2,045,291 - Echvi_1735 0.80 +0.9 2,045,291 - Echvi_1735 0.80 +0.4 2,045,291 - Echvi_1735 0.80 +1.2 2,045,310 + Echvi_1735 0.81 +1.6 2,045,442 + -0.1 2,045,504 - -0.4 2,045,529 + +0.2 2,045,530 - -0.1 2,045,536 - +0.5 2,045,573 + +0.1 2,045,574 - +0.5 2,045,574 - -0.2 2,045,574 - +0.2 2,045,574 - +0.3 2,045,574 - +1.1 2,045,578 + -0.1 2,045,579 - +0.7 2,045,579 - -0.4 2,045,579 - +0.0 2,045,579 - -1.2 2,045,661 + +1.1 2,045,661 + +0.4 2,045,662 - +0.6 2,045,664 - -2.7 2,045,773 + Echvi_1736 0.23 +1.6 2,045,774 - Echvi_1736 0.24 -0.7 2,045,819 + Echvi_1736 0.35 +0.4 2,045,819 + Echvi_1736 0.35 +0.3 2,045,840 + Echvi_1736 0.41 +0.2 2,045,866 + Echvi_1736 0.48 +0.4 2,045,875 - Echvi_1736 0.50 +0.3 2,045,896 + Echvi_1736 0.56 +0.3 2,046,012 - Echvi_1736 0.86 -1.6 2,046,054 - -0.8 2,046,065 - -0.3 2,046,070 + +0.3 2,046,071 - +0.4 2,046,076 + -0.9 2,046,076 + -0.2 2,046,092 + +0.5 2,046,092 + -0.5 2,046,110 + +0.6 2,046,144 + -0.2 2,046,145 - -0.1 2,046,255 - -1.1 2,046,333 + Echvi_1737 0.13 -1.8 2,046,342 - Echvi_1737 0.13 -2.3 2,046,342 - Echvi_1737 0.13 -1.7 2,046,374 + Echvi_1737 0.15 +0.9 2,046,374 + Echvi_1737 0.15 -1.8 2,046,374 + Echvi_1737 0.15 -0.3 2,046,405 - Echvi_1737 0.17 -1.3 2,046,405 - Echvi_1737 0.17 +0.2 2,046,454 - Echvi_1737 0.19 +1.8 2,046,490 - Echvi_1737 0.21 -0.3 2,046,531 - Echvi_1737 0.24 +0.4
Or see this region's nucleotide sequence