Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1200

Experiment: m.b. Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cisplatin 0.025 mg/ml
1,375,422	+		Echvi_1198	0.84	+0.3
1,375,423	-		Echvi_1198	0.84	+0.5
1,375,437	+		Echvi_1198	0.86	-0.7
1,375,437	+		Echvi_1198	0.86	+0.8
1,375,438	-		Echvi_1198	0.86	-1.1
1,375,438	-		Echvi_1198	0.86	-1.0
1,375,602	-				+0.6
1,375,606	-				+0.2
1,375,606	-				-1.1
1,375,606	-				+0.2
1,375,764	+		Echvi_1199	0.33	+0.7
1,375,765	-		Echvi_1199	0.33	-0.5
1,375,789	-		Echvi_1199	0.37	-0.1
1,375,876	+		Echvi_1199	0.51	-0.2
1,375,877	-		Echvi_1199	0.51	+1.4
1,375,904	+		Echvi_1199	0.55	-0.4
1,375,910	+		Echvi_1199	0.56	+0.4
1,375,911	-		Echvi_1199	0.57	+0.5
1,376,068	+		Echvi_1199	0.82	+1.3
1,376,068	+		Echvi_1199	0.82	+0.8
1,376,162	+				+0.3
1,376,162	+				-0.0
1,376,178	+				+0.2
1,376,185	+				+0.1
1,376,230	+				+0.1
1,376,231	-				+0.2
1,376,247	-				+0.5
1,376,247	-				-0.6
1,376,247	-				-0.1
1,376,248	+				+1.8
1,376,248	+				+0.0
1,376,248	+				+0.9
1,376,249	-				-1.3
1,376,249	-				+0.7
1,376,249	-				+2.1
1,376,249	-				-0.9
1,376,254	+				+2.4
1,376,307	+				+0.6
1,376,307	+				+0.2
1,376,307	+				+0.1
1,376,307	+				+1.2
1,376,307	+				+0.5
1,376,314	-				-0.5
1,376,314	-				-0.3
1,376,314	-				-0.6
1,376,314	-				-0.8
1,376,314	-				+0.4
1,376,315	+				+1.5
1,376,315	+				+0.2
1,376,315	+				-0.1
1,376,315	+				-0.2
1,376,315	+				+0.7
1,376,315	+				+0.6
1,376,316	-				-0.2
1,376,316	-				+0.6
1,376,316	-				-0.8
1,376,316	-				+0.6
1,376,316	-				-0.1
1,376,316	-				-0.8
1,376,316	-				+0.3
1,376,317	+				-1.2
1,376,317	+				+0.5
1,376,317	+				+0.1
1,376,317	+				+1.1
1,376,317	+				+0.8
1,376,317	+				-0.1
1,376,317	+				+1.2
1,376,317	+				+1.2
1,376,317	+				-0.2
1,376,317	+				+0.9
1,376,318	-				+0.3
1,376,318	-				-0.1
1,376,318	-				+0.1
1,376,318	-				+0.3
1,376,318	-				+0.1
1,376,318	-				+1.5
1,376,318	-				-1.0
1,376,326	-				+1.3
1,376,367	-				+0.2
1,376,386	-				+0.4
1,376,386	-				+1.2
1,376,449	+				-1.1
1,376,526	+		Echvi_1200	0.18	+0.1
1,376,553	-		Echvi_1200	0.23	-0.1
1,376,617	-		Echvi_1200	0.33	-1.4
1,376,695	-		Echvi_1200	0.46	-1.0
1,376,695	-		Echvi_1200	0.46	+0.1
1,376,753	+		Echvi_1200	0.56	+0.2
1,376,839	-		Echvi_1200	0.70	+1.1
1,376,926	-		Echvi_1200	0.84	-1.1
1,376,926	-		Echvi_1200	0.84	-0.2
1,376,928	+		Echvi_1200	0.84	-1.3
1,376,989	-				-0.9
1,376,994	-				-1.8
1,377,023	-				-0.5
1,377,049	-				-0.2
1,377,127	-				+0.7
1,377,129	-				-0.6
1,377,129	-				-1.7
1,377,129	-				+0.6
1,377,169	-				-0.6
1,377,177	-				-0.8
1,377,184	+				+0.3
1,377,185	-				+0.6
1,377,223	+				-0.4
1,377,239	+				+1.2
1,377,289	-				+1.1
1,377,350	+				+0.5
1,377,350	+				+0.3
1,377,351	-				-0.4
1,377,426	-		Echvi_1201	0.15	+1.0
1,377,471	-		Echvi_1201	0.18	-0.2
1,377,471	-		Echvi_1201	0.18	-0.3
1,377,612	-		Echvi_1201	0.28	+0.9
1,377,833	+		Echvi_1201	0.44	-1.9
1,377,928	-		Echvi_1201	0.51	+1.5
1,377,978	-		Echvi_1201	0.54	-0.3