Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1157 and Echvi_1158 are separated by 89 nucleotides Echvi_1158 and Echvi_1159 are separated by 25 nucleotides Echvi_1159 and Echvi_1160 are separated by 103 nucleotides
Echvi_1157: Echvi_1157 - hypothetical protein, at 1,324,959 to 1,325,318
_1157
Echvi_1158: Echvi_1158 - nicotinate-nucleotide pyrophosphorylase, at 1,325,408 to 1,326,265
_1158
Echvi_1159: Echvi_1159 - Response regulator of the LytR/AlgR family, at 1,326,291 to 1,327,061
_1159
Echvi_1160: Echvi_1160 - Alpha-L-fucosidase, at 1,327,165 to 1,329,219
_1160
Position (kb)
1326
1327
1328 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1325.402 kb on + strand at 1325.421 kb on - strand at 1325.424 kb on + strand at 1325.449 kb on + strand at 1325.539 kb on - strand, within Echvi_1158 at 1325.539 kb on - strand, within Echvi_1158 at 1325.600 kb on + strand, within Echvi_1158 at 1325.601 kb on - strand, within Echvi_1158 at 1325.649 kb on + strand, within Echvi_1158 at 1325.650 kb on - strand, within Echvi_1158 at 1325.695 kb on + strand, within Echvi_1158 at 1325.746 kb on + strand, within Echvi_1158 at 1325.746 kb on + strand, within Echvi_1158 at 1325.747 kb on - strand, within Echvi_1158 at 1325.764 kb on + strand, within Echvi_1158 at 1325.765 kb on - strand, within Echvi_1158 at 1325.765 kb on - strand, within Echvi_1158 at 1325.765 kb on - strand, within Echvi_1158 at 1325.765 kb on - strand, within Echvi_1158 at 1325.771 kb on - strand, within Echvi_1158 at 1325.895 kb on - strand, within Echvi_1158 at 1325.904 kb on + strand, within Echvi_1158 at 1325.904 kb on + strand, within Echvi_1158 at 1325.953 kb on + strand, within Echvi_1158 at 1325.953 kb on + strand, within Echvi_1158 at 1326.070 kb on + strand, within Echvi_1158 at 1326.071 kb on - strand, within Echvi_1158 at 1326.071 kb on - strand, within Echvi_1158 at 1326.082 kb on + strand, within Echvi_1158 at 1326.082 kb on + strand, within Echvi_1158 at 1326.090 kb on - strand, within Echvi_1158 at 1326.128 kb on - strand, within Echvi_1158 at 1326.128 kb on - strand, within Echvi_1158 at 1326.202 kb on + strand at 1326.202 kb on + strand at 1326.203 kb on - strand at 1326.281 kb on + strand at 1326.282 kb on - strand at 1326.432 kb on + strand, within Echvi_1159 at 1326.433 kb on - strand, within Echvi_1159 at 1326.475 kb on - strand, within Echvi_1159 at 1326.475 kb on - strand, within Echvi_1159 at 1326.491 kb on - strand, within Echvi_1159 at 1326.509 kb on + strand, within Echvi_1159 at 1326.524 kb on + strand, within Echvi_1159 at 1326.535 kb on + strand, within Echvi_1159 at 1326.536 kb on - strand, within Echvi_1159 at 1326.539 kb on + strand, within Echvi_1159 at 1326.540 kb on - strand, within Echvi_1159 at 1326.540 kb on - strand, within Echvi_1159 at 1326.597 kb on - strand, within Echvi_1159 at 1326.597 kb on - strand, within Echvi_1159 at 1326.652 kb on + strand, within Echvi_1159 at 1326.653 kb on - strand, within Echvi_1159 at 1326.653 kb on - strand, within Echvi_1159 at 1326.653 kb on - strand, within Echvi_1159 at 1326.653 kb on - strand, within Echvi_1159 at 1326.657 kb on + strand, within Echvi_1159 at 1326.740 kb on - strand, within Echvi_1159 at 1326.813 kb on + strand, within Echvi_1159 at 1326.813 kb on + strand, within Echvi_1159 at 1326.814 kb on - strand, within Echvi_1159 at 1326.814 kb on - strand, within Echvi_1159 at 1326.858 kb on - strand, within Echvi_1159 at 1326.863 kb on - strand, within Echvi_1159 at 1326.965 kb on + strand, within Echvi_1159 at 1326.974 kb on + strand, within Echvi_1159 at 1326.974 kb on + strand, within Echvi_1159 at 1326.974 kb on + strand, within Echvi_1159 at 1326.975 kb on - strand, within Echvi_1159 at 1326.996 kb on + strand at 1326.997 kb on - strand at 1326.997 kb on - strand at 1327.007 kb on + strand at 1327.008 kb on - strand at 1327.008 kb on - strand at 1327.008 kb on - strand at 1327.031 kb on - strand at 1327.031 kb on - strand at 1327.034 kb on + strand at 1327.035 kb on - strand at 1327.035 kb on - strand at 1327.109 kb on - strand at 1327.241 kb on + strand at 1327.241 kb on + strand at 1327.266 kb on + strand at 1327.279 kb on + strand at 1327.280 kb on - strand at 1327.296 kb on + strand at 1327.362 kb on - strand at 1327.386 kb on - strand, within Echvi_1160 at 1327.386 kb on - strand, within Echvi_1160 at 1327.386 kb on - strand, within Echvi_1160 at 1327.386 kb on - strand, within Echvi_1160 at 1327.386 kb on - strand, within Echvi_1160 at 1327.386 kb on - strand, within Echvi_1160 at 1327.386 kb on - strand, within Echvi_1160 at 1327.406 kb on + strand, within Echvi_1160 at 1327.407 kb on - strand, within Echvi_1160 at 1327.407 kb on - strand, within Echvi_1160 at 1327.410 kb on + strand, within Echvi_1160 at 1327.410 kb on + strand, within Echvi_1160 at 1327.410 kb on + strand, within Echvi_1160 at 1327.411 kb on - strand, within Echvi_1160 at 1327.411 kb on - strand, within Echvi_1160 at 1327.432 kb on - strand, within Echvi_1160 at 1327.432 kb on - strand, within Echvi_1160 at 1327.432 kb on - strand, within Echvi_1160 at 1327.432 kb on - strand, within Echvi_1160 at 1327.432 kb on - strand, within Echvi_1160 at 1327.570 kb on + strand, within Echvi_1160 at 1327.570 kb on + strand, within Echvi_1160 at 1327.571 kb on - strand, within Echvi_1160 at 1327.608 kb on + strand, within Echvi_1160 at 1327.608 kb on + strand, within Echvi_1160 at 1327.652 kb on + strand, within Echvi_1160 at 1327.652 kb on + strand, within Echvi_1160 at 1327.653 kb on - strand, within Echvi_1160 at 1327.653 kb on - strand, within Echvi_1160 at 1327.653 kb on - strand, within Echvi_1160 at 1327.653 kb on - strand, within Echvi_1160 at 1327.692 kb on + strand, within Echvi_1160 at 1327.693 kb on - strand, within Echvi_1160 at 1327.693 kb on - strand, within Echvi_1160 at 1327.693 kb on - strand, within Echvi_1160 at 1327.694 kb on + strand, within Echvi_1160 at 1327.697 kb on + strand, within Echvi_1160 at 1327.697 kb on + strand, within Echvi_1160 at 1327.698 kb on - strand, within Echvi_1160 at 1327.698 kb on - strand, within Echvi_1160 at 1327.698 kb on - strand, within Echvi_1160 at 1327.698 kb on - strand, within Echvi_1160 at 1327.733 kb on - strand, within Echvi_1160 at 1327.733 kb on - strand, within Echvi_1160 at 1327.744 kb on + strand, within Echvi_1160 at 1327.744 kb on + strand, within Echvi_1160 at 1327.745 kb on - strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.790 kb on + strand, within Echvi_1160 at 1327.791 kb on - strand, within Echvi_1160 at 1327.791 kb on - strand, within Echvi_1160 at 1327.791 kb on - strand, within Echvi_1160 at 1327.791 kb on - strand, within Echvi_1160 at 1327.791 kb on - strand, within Echvi_1160 at 1327.855 kb on - strand, within Echvi_1160 at 1327.982 kb on + strand, within Echvi_1160 at 1327.982 kb on + strand, within Echvi_1160 at 1327.982 kb on + strand, within Echvi_1160 at 1327.983 kb on - strand, within Echvi_1160 at 1327.983 kb on - strand, within Echvi_1160
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,325,402 + -0.9 1,325,421 - -0.4 1,325,424 + -1.1 1,325,449 + +0.3 1,325,539 - Echvi_1158 0.15 -0.5 1,325,539 - Echvi_1158 0.15 +0.0 1,325,600 + Echvi_1158 0.22 -0.2 1,325,601 - Echvi_1158 0.22 +0.6 1,325,649 + Echvi_1158 0.28 -2.0 1,325,650 - Echvi_1158 0.28 +0.9 1,325,695 + Echvi_1158 0.33 -1.0 1,325,746 + Echvi_1158 0.39 -2.7 1,325,746 + Echvi_1158 0.39 -1.8 1,325,747 - Echvi_1158 0.40 -1.9 1,325,764 + Echvi_1158 0.41 -0.4 1,325,765 - Echvi_1158 0.42 -0.5 1,325,765 - Echvi_1158 0.42 +0.2 1,325,765 - Echvi_1158 0.42 +0.2 1,325,765 - Echvi_1158 0.42 +1.2 1,325,771 - Echvi_1158 0.42 +0.3 1,325,895 - Echvi_1158 0.57 +0.8 1,325,904 + Echvi_1158 0.58 -0.6 1,325,904 + Echvi_1158 0.58 +2.6 1,325,953 + Echvi_1158 0.64 -1.6 1,325,953 + Echvi_1158 0.64 +1.3 1,326,070 + Echvi_1158 0.77 +0.0 1,326,071 - Echvi_1158 0.77 -0.9 1,326,071 - Echvi_1158 0.77 -0.5 1,326,082 + Echvi_1158 0.79 -0.2 1,326,082 + Echvi_1158 0.79 -0.9 1,326,090 - Echvi_1158 0.79 -0.0 1,326,128 - Echvi_1158 0.84 +1.1 1,326,128 - Echvi_1158 0.84 -1.3 1,326,202 + +0.6 1,326,202 + -0.1 1,326,203 - -0.8 1,326,281 + -0.2 1,326,282 - +0.5 1,326,432 + Echvi_1159 0.18 +0.9 1,326,433 - Echvi_1159 0.18 +0.1 1,326,475 - Echvi_1159 0.24 -1.3 1,326,475 - Echvi_1159 0.24 +0.1 1,326,491 - Echvi_1159 0.26 +0.3 1,326,509 + Echvi_1159 0.28 +0.5 1,326,524 + Echvi_1159 0.30 -0.6 1,326,535 + Echvi_1159 0.32 +0.0 1,326,536 - Echvi_1159 0.32 +0.5 1,326,539 + Echvi_1159 0.32 -0.3 1,326,540 - Echvi_1159 0.32 +0.7 1,326,540 - Echvi_1159 0.32 +0.4 1,326,597 - Echvi_1159 0.40 -0.1 1,326,597 - Echvi_1159 0.40 -0.4 1,326,652 + Echvi_1159 0.47 +1.6 1,326,653 - Echvi_1159 0.47 -0.8 1,326,653 - Echvi_1159 0.47 +0.2 1,326,653 - Echvi_1159 0.47 +0.2 1,326,653 - Echvi_1159 0.47 +0.6 1,326,657 + Echvi_1159 0.47 +0.9 1,326,740 - Echvi_1159 0.58 +0.7 1,326,813 + Echvi_1159 0.68 +0.5 1,326,813 + Echvi_1159 0.68 -0.0 1,326,814 - Echvi_1159 0.68 -0.2 1,326,814 - Echvi_1159 0.68 +0.7 1,326,858 - Echvi_1159 0.74 +1.9 1,326,863 - Echvi_1159 0.74 +0.4 1,326,965 + Echvi_1159 0.87 +0.5 1,326,974 + Echvi_1159 0.89 +0.9 1,326,974 + Echvi_1159 0.89 -0.8 1,326,974 + Echvi_1159 0.89 -0.3 1,326,975 - Echvi_1159 0.89 +0.6 1,326,996 + -0.8 1,326,997 - -0.7 1,326,997 - +0.1 1,327,007 + +0.1 1,327,008 - -0.5 1,327,008 - +0.5 1,327,008 - -1.1 1,327,031 - +1.3 1,327,031 - -0.6 1,327,034 + +0.2 1,327,035 - -0.3 1,327,035 - +0.0 1,327,109 - -1.7 1,327,241 + +0.9 1,327,241 + -1.4 1,327,266 + -1.1 1,327,279 + +0.9 1,327,280 - +0.2 1,327,296 + -0.6 1,327,362 - -0.5 1,327,386 - Echvi_1160 0.11 -1.0 1,327,386 - Echvi_1160 0.11 -0.5 1,327,386 - Echvi_1160 0.11 -0.2 1,327,386 - Echvi_1160 0.11 -1.2 1,327,386 - Echvi_1160 0.11 -0.4 1,327,386 - Echvi_1160 0.11 -0.3 1,327,386 - Echvi_1160 0.11 -1.1 1,327,406 + Echvi_1160 0.12 +0.2 1,327,407 - Echvi_1160 0.12 -0.5 1,327,407 - Echvi_1160 0.12 -1.6 1,327,410 + Echvi_1160 0.12 +0.5 1,327,410 + Echvi_1160 0.12 +0.6 1,327,410 + Echvi_1160 0.12 -0.2 1,327,411 - Echvi_1160 0.12 -0.8 1,327,411 - Echvi_1160 0.12 +0.5 1,327,432 - Echvi_1160 0.13 +0.3 1,327,432 - Echvi_1160 0.13 -0.9 1,327,432 - Echvi_1160 0.13 +0.2 1,327,432 - Echvi_1160 0.13 -0.7 1,327,432 - Echvi_1160 0.13 -0.2 1,327,570 + Echvi_1160 0.20 -1.8 1,327,570 + Echvi_1160 0.20 +0.6 1,327,571 - Echvi_1160 0.20 -1.6 1,327,608 + Echvi_1160 0.22 +0.3 1,327,608 + Echvi_1160 0.22 -1.0 1,327,652 + Echvi_1160 0.24 -1.1 1,327,652 + Echvi_1160 0.24 -0.0 1,327,653 - Echvi_1160 0.24 +0.6 1,327,653 - Echvi_1160 0.24 +0.8 1,327,653 - Echvi_1160 0.24 -0.9 1,327,653 - Echvi_1160 0.24 -2.1 1,327,692 + Echvi_1160 0.26 -0.9 1,327,693 - Echvi_1160 0.26 -1.2 1,327,693 - Echvi_1160 0.26 +0.5 1,327,693 - Echvi_1160 0.26 +0.6 1,327,694 + Echvi_1160 0.26 +0.1 1,327,697 + Echvi_1160 0.26 -0.4 1,327,697 + Echvi_1160 0.26 +0.9 1,327,698 - Echvi_1160 0.26 +0.1 1,327,698 - Echvi_1160 0.26 -0.5 1,327,698 - Echvi_1160 0.26 +0.2 1,327,698 - Echvi_1160 0.26 -0.8 1,327,733 - Echvi_1160 0.28 -0.5 1,327,733 - Echvi_1160 0.28 -1.0 1,327,744 + Echvi_1160 0.28 +1.0 1,327,744 + Echvi_1160 0.28 +1.2 1,327,745 - Echvi_1160 0.28 -1.3 1,327,790 + Echvi_1160 0.30 -0.1 1,327,790 + Echvi_1160 0.30 +0.7 1,327,790 + Echvi_1160 0.30 +0.6 1,327,790 + Echvi_1160 0.30 +0.7 1,327,790 + Echvi_1160 0.30 +1.3 1,327,790 + Echvi_1160 0.30 +2.0 1,327,790 + Echvi_1160 0.30 +1.1 1,327,790 + Echvi_1160 0.30 -0.2 1,327,790 + Echvi_1160 0.30 -0.7 1,327,791 - Echvi_1160 0.30 -1.2 1,327,791 - Echvi_1160 0.30 -1.0 1,327,791 - Echvi_1160 0.30 -0.1 1,327,791 - Echvi_1160 0.30 +1.2 1,327,791 - Echvi_1160 0.30 +1.5 1,327,855 - Echvi_1160 0.34 +0.4 1,327,982 + Echvi_1160 0.40 -1.4 1,327,982 + Echvi_1160 0.40 +2.6 1,327,982 + Echvi_1160 0.40 -1.4 1,327,983 - Echvi_1160 0.40 -0.7 1,327,983 - Echvi_1160 0.40 -0.9
Or see this region's nucleotide sequence