Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1031 and Echvi_1032 are separated by 147 nucleotides Echvi_1032 and Echvi_1033 are separated by 447 nucleotides
Echvi_1031: Echvi_1031 - DNA repair protein RadA, at 1,192,607 to 1,193,983
_1031
Echvi_1032: Echvi_1032 - DNA polymerase I, at 1,194,131 to 1,196,944
_1032
Echvi_1033: Echvi_1033 - hypothetical protein, at 1,197,392 to 1,197,709
_1033
Position (kb)
1194
1195
1196
1197 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1193.184 kb on + strand, within Echvi_1031 at 1193.185 kb on - strand, within Echvi_1031 at 1193.204 kb on - strand, within Echvi_1031 at 1193.242 kb on - strand, within Echvi_1031 at 1193.287 kb on + strand, within Echvi_1031 at 1193.287 kb on + strand, within Echvi_1031 at 1193.288 kb on - strand, within Echvi_1031 at 1193.288 kb on - strand, within Echvi_1031 at 1193.288 kb on - strand, within Echvi_1031 at 1193.288 kb on - strand, within Echvi_1031 at 1193.288 kb on - strand, within Echvi_1031 at 1193.288 kb on - strand, within Echvi_1031 at 1193.288 kb on - strand, within Echvi_1031 at 1193.297 kb on + strand, within Echvi_1031 at 1193.312 kb on + strand, within Echvi_1031 at 1193.313 kb on - strand, within Echvi_1031 at 1193.332 kb on + strand, within Echvi_1031 at 1193.332 kb on + strand, within Echvi_1031 at 1193.332 kb on + strand, within Echvi_1031 at 1193.332 kb on + strand, within Echvi_1031 at 1193.392 kb on + strand, within Echvi_1031 at 1193.393 kb on - strand, within Echvi_1031 at 1193.393 kb on - strand, within Echvi_1031 at 1193.495 kb on + strand, within Echvi_1031 at 1193.496 kb on - strand, within Echvi_1031 at 1193.496 kb on - strand, within Echvi_1031 at 1193.496 kb on - strand, within Echvi_1031 at 1193.613 kb on + strand, within Echvi_1031 at 1193.613 kb on + strand, within Echvi_1031 at 1193.614 kb on - strand, within Echvi_1031 at 1193.614 kb on - strand, within Echvi_1031 at 1193.614 kb on - strand, within Echvi_1031 at 1193.614 kb on - strand, within Echvi_1031 at 1193.633 kb on + strand, within Echvi_1031 at 1193.779 kb on - strand, within Echvi_1031 at 1193.779 kb on - strand, within Echvi_1031 at 1193.810 kb on - strand, within Echvi_1031 at 1193.890 kb on + strand at 1193.891 kb on - strand at 1193.891 kb on - strand at 1193.961 kb on + strand at 1193.962 kb on - strand at 1193.978 kb on - strand at 1193.994 kb on + strand at 1193.994 kb on + strand at 1193.995 kb on - strand at 1194.004 kb on + strand at 1194.004 kb on + strand at 1194.004 kb on + strand at 1194.004 kb on + strand at 1194.004 kb on + strand at 1194.004 kb on + strand at 1194.005 kb on - strand at 1194.005 kb on - strand at 1194.005 kb on - strand at 1194.005 kb on - strand at 1194.005 kb on - strand at 1194.005 kb on - strand at 1194.018 kb on + strand at 1194.018 kb on + strand at 1194.018 kb on + strand at 1194.049 kb on + strand at 1194.049 kb on + strand at 1194.049 kb on + strand at 1194.050 kb on - strand at 1194.050 kb on - strand at 1194.050 kb on - strand at 1194.056 kb on - strand at 1194.064 kb on + strand at 1194.085 kb on + strand at 1194.118 kb on - strand at 1194.118 kb on - strand at 1194.164 kb on + strand at 1194.164 kb on + strand at 1194.164 kb on + strand at 1194.478 kb on - strand, within Echvi_1032 at 1194.555 kb on - strand, within Echvi_1032 at 1194.945 kb on + strand, within Echvi_1032 at 1195.003 kb on - strand, within Echvi_1032 at 1195.014 kb on - strand, within Echvi_1032 at 1195.102 kb on - strand, within Echvi_1032 at 1195.344 kb on + strand, within Echvi_1032 at 1195.512 kb on - strand, within Echvi_1032 at 1195.598 kb on - strand, within Echvi_1032 at 1195.603 kb on - strand, within Echvi_1032 at 1195.870 kb on - strand, within Echvi_1032 at 1195.910 kb on - strand, within Echvi_1032 at 1195.964 kb on - strand, within Echvi_1032 at 1196.951 kb on - strand at 1196.960 kb on - strand at 1196.960 kb on - strand at 1196.960 kb on - strand at 1196.960 kb on - strand at 1196.966 kb on + strand at 1196.967 kb on - strand at 1196.969 kb on - strand at 1196.969 kb on - strand at 1197.024 kb on + strand at 1197.056 kb on + strand at 1197.066 kb on + strand at 1197.066 kb on + strand at 1197.067 kb on - strand at 1197.160 kb on + strand at 1197.160 kb on + strand at 1197.161 kb on - strand at 1197.178 kb on + strand at 1197.178 kb on + strand at 1197.179 kb on - strand at 1197.213 kb on + strand at 1197.213 kb on + strand at 1197.264 kb on - strand at 1197.264 kb on - strand at 1197.264 kb on - strand at 1197.264 kb on - strand at 1197.269 kb on - strand at 1197.289 kb on + strand at 1197.298 kb on - strand at 1197.298 kb on - strand at 1197.356 kb on + strand at 1197.357 kb on - strand at 1197.363 kb on - strand at 1197.363 kb on - strand at 1197.391 kb on + strand at 1197.495 kb on + strand, within Echvi_1033 at 1197.495 kb on + strand, within Echvi_1033 at 1197.496 kb on - strand, within Echvi_1033 at 1197.541 kb on - strand, within Echvi_1033 at 1197.654 kb on - strand, within Echvi_1033 at 1197.711 kb on - strand at 1197.711 kb on - strand at 1197.750 kb on - strand at 1197.780 kb on - strand at 1197.808 kb on - strand at 1197.813 kb on + strand at 1197.847 kb on + strand at 1197.847 kb on + strand at 1197.864 kb on + strand at 1197.884 kb on + strand at 1197.884 kb on + strand at 1197.884 kb on + strand at 1197.885 kb on - strand at 1197.944 kb on - strand at 1197.944 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,193,184 + Echvi_1031 0.42 -1.0 1,193,185 - Echvi_1031 0.42 -1.8 1,193,204 - Echvi_1031 0.43 -1.2 1,193,242 - Echvi_1031 0.46 -1.2 1,193,287 + Echvi_1031 0.49 -2.5 1,193,287 + Echvi_1031 0.49 +0.1 1,193,288 - Echvi_1031 0.49 -2.0 1,193,288 - Echvi_1031 0.49 -0.6 1,193,288 - Echvi_1031 0.49 +0.9 1,193,288 - Echvi_1031 0.49 -0.1 1,193,288 - Echvi_1031 0.49 -0.5 1,193,288 - Echvi_1031 0.49 -0.3 1,193,288 - Echvi_1031 0.49 -1.0 1,193,297 + Echvi_1031 0.50 -1.4 1,193,312 + Echvi_1031 0.51 -2.3 1,193,313 - Echvi_1031 0.51 -1.8 1,193,332 + Echvi_1031 0.53 +0.2 1,193,332 + Echvi_1031 0.53 -1.9 1,193,332 + Echvi_1031 0.53 -2.3 1,193,332 + Echvi_1031 0.53 -1.6 1,193,392 + Echvi_1031 0.57 -1.1 1,193,393 - Echvi_1031 0.57 -0.4 1,193,393 - Echvi_1031 0.57 -0.6 1,193,495 + Echvi_1031 0.64 -1.9 1,193,496 - Echvi_1031 0.65 -2.8 1,193,496 - Echvi_1031 0.65 -0.8 1,193,496 - Echvi_1031 0.65 -0.3 1,193,613 + Echvi_1031 0.73 -1.0 1,193,613 + Echvi_1031 0.73 -0.5 1,193,614 - Echvi_1031 0.73 -0.6 1,193,614 - Echvi_1031 0.73 -1.1 1,193,614 - Echvi_1031 0.73 -1.5 1,193,614 - Echvi_1031 0.73 -2.7 1,193,633 + Echvi_1031 0.75 -1.5 1,193,779 - Echvi_1031 0.85 -2.5 1,193,779 - Echvi_1031 0.85 +0.1 1,193,810 - Echvi_1031 0.87 -0.3 1,193,890 + -1.5 1,193,891 - -1.0 1,193,891 - -0.9 1,193,961 + -1.8 1,193,962 - -1.0 1,193,978 - -1.9 1,193,994 + -0.4 1,193,994 + -0.1 1,193,995 - +1.4 1,194,004 + -0.3 1,194,004 + -0.5 1,194,004 + -0.6 1,194,004 + -0.4 1,194,004 + +0.2 1,194,004 + +0.3 1,194,005 - +0.5 1,194,005 - -1.3 1,194,005 - +0.4 1,194,005 - +0.5 1,194,005 - +0.9 1,194,005 - +2.7 1,194,018 + -0.7 1,194,018 + -1.1 1,194,018 + +0.2 1,194,049 + +0.0 1,194,049 + +0.1 1,194,049 + -0.2 1,194,050 - +0.2 1,194,050 - +0.5 1,194,050 - +0.4 1,194,056 - +0.0 1,194,064 + +0.2 1,194,085 + +0.3 1,194,118 - +0.3 1,194,118 - +0.5 1,194,164 + -1.1 1,194,164 + -1.6 1,194,164 + -0.5 1,194,478 - Echvi_1032 0.12 -1.1 1,194,555 - Echvi_1032 0.15 +1.1 1,194,945 + Echvi_1032 0.29 -1.5 1,195,003 - Echvi_1032 0.31 -1.3 1,195,014 - Echvi_1032 0.31 +1.7 1,195,102 - Echvi_1032 0.35 +0.5 1,195,344 + Echvi_1032 0.43 -1.6 1,195,512 - Echvi_1032 0.49 +0.3 1,195,598 - Echvi_1032 0.52 +0.1 1,195,603 - Echvi_1032 0.52 +1.3 1,195,870 - Echvi_1032 0.62 -0.3 1,195,910 - Echvi_1032 0.63 -0.6 1,195,964 - Echvi_1032 0.65 -0.7 1,196,951 - +1.1 1,196,960 - -1.5 1,196,960 - -0.2 1,196,960 - -0.7 1,196,960 - -0.6 1,196,966 + -0.3 1,196,967 - +0.3 1,196,969 - -0.9 1,196,969 - -0.1 1,197,024 + +0.0 1,197,056 + -1.2 1,197,066 + +0.9 1,197,066 + +0.6 1,197,067 - -0.1 1,197,160 + +1.0 1,197,160 + -1.2 1,197,161 - +2.7 1,197,178 + +1.2 1,197,178 + +0.1 1,197,179 - -0.3 1,197,213 + -1.0 1,197,213 + -0.1 1,197,264 - -0.1 1,197,264 - +0.9 1,197,264 - -0.3 1,197,264 - +0.3 1,197,269 - +0.5 1,197,289 + +0.9 1,197,298 - -0.2 1,197,298 - -0.7 1,197,356 + -0.1 1,197,357 - -0.2 1,197,363 - +0.2 1,197,363 - +0.2 1,197,391 + -0.9 1,197,495 + Echvi_1033 0.32 +0.5 1,197,495 + Echvi_1033 0.32 -0.3 1,197,496 - Echvi_1033 0.33 -2.0 1,197,541 - Echvi_1033 0.47 +0.3 1,197,654 - Echvi_1033 0.82 +0.1 1,197,711 - +0.3 1,197,711 - -0.0 1,197,750 - +1.3 1,197,780 - +0.9 1,197,808 - -0.5 1,197,813 + -0.3 1,197,847 + -0.9 1,197,847 + +1.1 1,197,864 + +0.0 1,197,884 + -1.4 1,197,884 + +0.9 1,197,884 + +0.9 1,197,885 - +0.3 1,197,944 - -0.6 1,197,944 - +1.2
Or see this region's nucleotide sequence