Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0782 and Echvi_0783 are separated by 287 nucleotides Echvi_0783 and Echvi_0784 are separated by 173 nucleotides
Echvi_0782: Echvi_0782 - Uncharacterized membrane protein (homolog of Drosophila rhomboid), at 882,606 to 883,526
_0782
Echvi_0783: Echvi_0783 - hypothetical protein, at 883,814 to 885,331
_0783
Echvi_0784: Echvi_0784 - ATP-dependent DNA helicase RecQ, at 885,505 to 887,631
_0784
Position (kb) 883
884
885
886 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 882.827 kb on + strand, within Echvi_0782 at 882.827 kb on + strand, within Echvi_0782 at 882.827 kb on + strand, within Echvi_0782 at 882.827 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.831 kb on + strand, within Echvi_0782 at 882.832 kb on - strand, within Echvi_0782 at 882.832 kb on - strand, within Echvi_0782 at 882.832 kb on - strand, within Echvi_0782 at 882.832 kb on - strand, within Echvi_0782 at 882.839 kb on + strand, within Echvi_0782 at 882.884 kb on - strand, within Echvi_0782 at 882.884 kb on - strand, within Echvi_0782 at 882.885 kb on + strand, within Echvi_0782 at 882.886 kb on - strand, within Echvi_0782 at 882.913 kb on - strand, within Echvi_0782 at 882.942 kb on + strand, within Echvi_0782 at 882.942 kb on + strand, within Echvi_0782 at 882.942 kb on + strand, within Echvi_0782 at 882.943 kb on - strand, within Echvi_0782 at 882.976 kb on - strand, within Echvi_0782 at 882.976 kb on - strand, within Echvi_0782 at 882.987 kb on + strand, within Echvi_0782 at 882.988 kb on - strand, within Echvi_0782 at 882.988 kb on - strand, within Echvi_0782 at 882.995 kb on - strand, within Echvi_0782 at 883.009 kb on + strand, within Echvi_0782 at 883.009 kb on + strand, within Echvi_0782 at 883.009 kb on + strand, within Echvi_0782 at 883.010 kb on - strand, within Echvi_0782 at 883.056 kb on + strand, within Echvi_0782 at 883.146 kb on - strand, within Echvi_0782 at 883.147 kb on + strand, within Echvi_0782 at 883.148 kb on - strand, within Echvi_0782 at 883.153 kb on - strand, within Echvi_0782 at 883.228 kb on + strand, within Echvi_0782 at 883.233 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.237 kb on + strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.238 kb on - strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.239 kb on + strand, within Echvi_0782 at 883.240 kb on - strand, within Echvi_0782 at 883.240 kb on - strand, within Echvi_0782 at 883.365 kb on + strand, within Echvi_0782 at 883.366 kb on - strand, within Echvi_0782 at 883.366 kb on - strand, within Echvi_0782 at 883.520 kb on + strand at 883.521 kb on - strand at 883.521 kb on - strand at 883.524 kb on + strand at 883.524 kb on + strand at 883.524 kb on + strand at 883.525 kb on - strand at 883.528 kb on - strand at 883.528 kb on - strand at 883.530 kb on + strand at 883.530 kb on + strand at 883.530 kb on + strand at 883.530 kb on + strand at 883.534 kb on + strand at 883.542 kb on - strand at 883.542 kb on - strand at 883.542 kb on - strand at 883.545 kb on + strand at 883.545 kb on + strand at 883.545 kb on + strand at 883.545 kb on + strand at 883.545 kb on + strand at 883.546 kb on - strand at 883.546 kb on - strand at 883.546 kb on - strand at 883.549 kb on - strand at 883.647 kb on - strand at 883.647 kb on - strand at 883.687 kb on + strand at 883.707 kb on - strand at 883.707 kb on - strand at 883.820 kb on + strand at 883.822 kb on + strand at 883.836 kb on + strand at 883.901 kb on + strand at 883.901 kb on + strand at 883.901 kb on + strand at 883.901 kb on + strand at 883.938 kb on + strand at 883.960 kb on - strand at 883.975 kb on + strand, within Echvi_0783 at 883.976 kb on - strand, within Echvi_0783 at 884.084 kb on - strand, within Echvi_0783 at 884.090 kb on - strand, within Echvi_0783 at 884.093 kb on + strand, within Echvi_0783 at 884.093 kb on + strand, within Echvi_0783 at 884.094 kb on - strand, within Echvi_0783 at 884.094 kb on - strand, within Echvi_0783 at 884.163 kb on + strand, within Echvi_0783 at 884.163 kb on + strand, within Echvi_0783 at 884.163 kb on + strand, within Echvi_0783 at 884.164 kb on - strand, within Echvi_0783 at 884.164 kb on - strand, within Echvi_0783 at 884.164 kb on - strand, within Echvi_0783 at 884.200 kb on - strand, within Echvi_0783 at 884.200 kb on - strand, within Echvi_0783 at 884.200 kb on - strand, within Echvi_0783 at 884.214 kb on + strand, within Echvi_0783 at 884.214 kb on + strand, within Echvi_0783 at 884.215 kb on - strand, within Echvi_0783 at 884.282 kb on + strand, within Echvi_0783 at 884.283 kb on - strand, within Echvi_0783 at 884.283 kb on - strand, within Echvi_0783 at 884.301 kb on + strand, within Echvi_0783 at 884.301 kb on + strand, within Echvi_0783 at 884.302 kb on - strand, within Echvi_0783 at 884.418 kb on + strand, within Echvi_0783 at 884.419 kb on - strand, within Echvi_0783 at 884.433 kb on - strand, within Echvi_0783 at 884.443 kb on + strand, within Echvi_0783 at 884.558 kb on - strand, within Echvi_0783 at 884.558 kb on - strand, within Echvi_0783 at 884.567 kb on + strand, within Echvi_0783 at 884.567 kb on + strand, within Echvi_0783 at 884.568 kb on - strand, within Echvi_0783 at 884.568 kb on - strand, within Echvi_0783 at 884.568 kb on - strand, within Echvi_0783 at 884.568 kb on - strand, within Echvi_0783 at 884.570 kb on + strand, within Echvi_0783 at 884.576 kb on - strand, within Echvi_0783 at 884.623 kb on + strand, within Echvi_0783 at 884.624 kb on - strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.675 kb on + strand, within Echvi_0783 at 884.676 kb on - strand, within Echvi_0783 at 884.676 kb on - strand, within Echvi_0783 at 884.677 kb on + strand, within Echvi_0783 at 884.677 kb on + strand, within Echvi_0783 at 884.684 kb on + strand, within Echvi_0783 at 884.685 kb on - strand, within Echvi_0783 at 884.707 kb on + strand, within Echvi_0783 at 884.807 kb on + strand, within Echvi_0783 at 884.807 kb on + strand, within Echvi_0783 at 884.807 kb on + strand, within Echvi_0783 at 884.965 kb on - strand, within Echvi_0783 at 884.965 kb on - strand, within Echvi_0783 at 884.988 kb on + strand, within Echvi_0783 at 884.988 kb on + strand, within Echvi_0783 at 884.989 kb on - strand, within Echvi_0783 at 884.990 kb on + strand, within Echvi_0783 at 884.990 kb on + strand, within Echvi_0783 at 884.994 kb on - strand, within Echvi_0783 at 885.058 kb on - strand, within Echvi_0783 at 885.174 kb on - strand, within Echvi_0783 at 885.185 kb on - strand at 885.185 kb on - strand at 885.207 kb on + strand at 885.207 kb on + strand at 885.207 kb on + strand at 885.237 kb on + strand at 885.241 kb on + strand at 885.241 kb on + strand at 885.241 kb on + strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.242 kb on - strand at 885.247 kb on - strand at 885.350 kb on + strand at 885.351 kb on - strand at 885.392 kb on + strand at 885.471 kb on - strand at 885.471 kb on - strand at 885.477 kb on - strand at 885.525 kb on - strand at 885.529 kb on - strand at 885.529 kb on - strand at 885.539 kb on - strand at 885.545 kb on - strand at 885.549 kb on + strand at 885.550 kb on - strand at 885.590 kb on + strand at 885.641 kb on + strand at 885.687 kb on + strand at 885.687 kb on + strand at 885.757 kb on + strand, within Echvi_0784 at 885.835 kb on + strand, within Echvi_0784 at 885.835 kb on + strand, within Echvi_0784 at 885.836 kb on - strand, within Echvi_0784 at 885.917 kb on + strand, within Echvi_0784 at 885.917 kb on + strand, within Echvi_0784 at 885.917 kb on + strand, within Echvi_0784 at 885.918 kb on - strand, within Echvi_0784 at 885.968 kb on - strand, within Echvi_0784 at 885.968 kb on - strand, within Echvi_0784 at 885.968 kb on - strand, within Echvi_0784 at 886.007 kb on + strand, within Echvi_0784 at 886.007 kb on + strand, within Echvi_0784 at 886.017 kb on - strand, within Echvi_0784 at 886.123 kb on - strand, within Echvi_0784 at 886.123 kb on - strand, within Echvi_0784 at 886.123 kb on - strand, within Echvi_0784 at 886.126 kb on + strand, within Echvi_0784 at 886.126 kb on + strand, within Echvi_0784 at 886.181 kb on - strand, within Echvi_0784 at 886.230 kb on - strand, within Echvi_0784
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 882,827 + Echvi_0782 0.24 -1.1 882,827 + Echvi_0782 0.24 +0.0 882,827 + Echvi_0782 0.24 -0.5 882,827 + Echvi_0782 0.24 -0.4 882,831 + Echvi_0782 0.24 -0.4 882,831 + Echvi_0782 0.24 +0.1 882,831 + Echvi_0782 0.24 +0.0 882,831 + Echvi_0782 0.24 -0.9 882,831 + +2.6 882,831 + Echvi_0782 0.24 -2.0 882,831 + Echvi_0782 0.24 +1.1 882,831 + Echvi_0782 0.24 +0.8 882,832 - Echvi_0782 0.25 -1.1 882,832 - Echvi_0782 0.25 -1.1 882,832 - Echvi_0782 0.25 -0.8 882,832 - Echvi_0782 0.25 +1.0 882,839 + Echvi_0782 0.25 +0.2 882,884 - Echvi_0782 0.30 +1.3 882,884 - Echvi_0782 0.30 +0.2 882,885 + Echvi_0782 0.30 +0.1 882,886 - Echvi_0782 0.30 -1.0 882,913 - Echvi_0782 0.33 -1.8 882,942 + Echvi_0782 0.36 -0.6 882,942 + Echvi_0782 0.36 -0.1 882,942 + Echvi_0782 0.36 -0.4 882,943 - Echvi_0782 0.37 -2.6 882,976 - Echvi_0782 0.40 -0.4 882,976 - Echvi_0782 0.40 -1.3 882,987 + Echvi_0782 0.41 +0.1 882,988 - Echvi_0782 0.41 -1.9 882,988 - Echvi_0782 0.41 +0.6 882,995 - Echvi_0782 0.42 -1.5 883,009 + Echvi_0782 0.44 +0.3 883,009 + Echvi_0782 0.44 -0.3 883,009 + Echvi_0782 0.44 +0.3 883,010 - Echvi_0782 0.44 -0.5 883,056 + Echvi_0782 0.49 -1.5 883,146 - Echvi_0782 0.59 -1.0 883,147 + Echvi_0782 0.59 +0.0 883,148 - Echvi_0782 0.59 -1.1 883,153 - Echvi_0782 0.59 -1.2 883,228 + Echvi_0782 0.68 -0.6 883,233 + Echvi_0782 0.68 +0.2 883,237 + Echvi_0782 0.69 +1.3 883,237 + Echvi_0782 0.69 +0.5 883,237 + Echvi_0782 0.69 +2.0 883,237 + Echvi_0782 0.69 -1.6 883,237 + Echvi_0782 0.69 +0.9 883,237 + Echvi_0782 0.69 +0.4 883,237 + Echvi_0782 0.69 +0.4 883,238 - Echvi_0782 0.69 -0.5 883,238 - Echvi_0782 0.69 +2.4 883,238 - Echvi_0782 0.69 -0.0 883,238 - Echvi_0782 0.69 -0.4 883,238 - Echvi_0782 0.69 +0.9 883,238 - Echvi_0782 0.69 +0.6 883,239 + Echvi_0782 0.69 -0.1 883,239 + Echvi_0782 0.69 +0.6 883,239 + Echvi_0782 0.69 -1.4 883,239 + Echvi_0782 0.69 +0.6 883,239 + Echvi_0782 0.69 +0.4 883,240 - Echvi_0782 0.69 +1.0 883,240 - Echvi_0782 0.69 -0.5 883,365 + Echvi_0782 0.82 +0.4 883,366 - Echvi_0782 0.83 +0.4 883,366 - Echvi_0782 0.83 -1.1 883,520 + +0.3 883,521 - +0.6 883,521 - +0.3 883,524 + -1.0 883,524 + -1.2 883,524 + +1.5 883,525 - +1.0 883,528 - -0.1 883,528 - -0.3 883,530 + -0.2 883,530 + +0.4 883,530 + +1.0 883,530 + +0.6 883,534 + -0.2 883,542 - +0.8 883,542 - +1.1 883,542 - -0.1 883,545 + +0.1 883,545 + +0.5 883,545 + -0.6 883,545 + +0.3 883,545 + +0.3 883,546 - -0.3 883,546 - +0.0 883,546 - +0.6 883,549 - -2.7 883,647 - +0.2 883,647 - -0.4 883,687 + -0.1 883,707 - -0.0 883,707 - -0.5 883,820 + -0.8 883,822 + -1.0 883,836 + +1.5 883,901 + -0.2 883,901 + +1.5 883,901 + +1.0 883,901 + +2.0 883,938 + +0.8 883,960 - +1.3 883,975 + Echvi_0783 0.11 +0.2 883,976 - Echvi_0783 0.11 -0.9 884,084 - Echvi_0783 0.18 -0.4 884,090 - Echvi_0783 0.18 -1.2 884,093 + Echvi_0783 0.18 -0.1 884,093 + Echvi_0783 0.18 -0.5 884,094 - Echvi_0783 0.18 -1.3 884,094 - Echvi_0783 0.18 -0.7 884,163 + Echvi_0783 0.23 -0.9 884,163 + Echvi_0783 0.23 -0.7 884,163 + Echvi_0783 0.23 -1.3 884,164 - Echvi_0783 0.23 -1.5 884,164 - Echvi_0783 0.23 +0.2 884,164 - Echvi_0783 0.23 -0.8 884,200 - Echvi_0783 0.25 -1.3 884,200 - Echvi_0783 0.25 +0.0 884,200 - Echvi_0783 0.25 -1.1 884,214 + Echvi_0783 0.26 -0.4 884,214 + Echvi_0783 0.26 -0.5 884,215 - Echvi_0783 0.26 +1.2 884,282 + Echvi_0783 0.31 -0.1 884,283 - Echvi_0783 0.31 +0.4 884,283 - Echvi_0783 0.31 +0.6 884,301 + Echvi_0783 0.32 +0.4 884,301 + Echvi_0783 0.32 -1.0 884,302 - Echvi_0783 0.32 +0.2 884,418 + Echvi_0783 0.40 -0.8 884,419 - Echvi_0783 0.40 -0.4 884,433 - Echvi_0783 0.41 -0.7 884,443 + Echvi_0783 0.41 -1.6 884,558 - Echvi_0783 0.49 +0.7 884,558 - Echvi_0783 0.49 -2.3 884,567 + Echvi_0783 0.50 -1.5 884,567 + Echvi_0783 0.50 +0.9 884,568 - Echvi_0783 0.50 -0.4 884,568 - Echvi_0783 0.50 +0.5 884,568 - Echvi_0783 0.50 +1.3 884,568 - Echvi_0783 0.50 -0.4 884,570 + Echvi_0783 0.50 +0.4 884,576 - Echvi_0783 0.50 +0.0 884,623 + Echvi_0783 0.53 -0.5 884,624 - Echvi_0783 0.53 -0.8 884,675 + Echvi_0783 0.57 -0.8 884,675 + Echvi_0783 0.57 -1.2 884,675 + Echvi_0783 0.57 -0.4 884,675 + Echvi_0783 0.57 +0.9 884,675 + Echvi_0783 0.57 +0.4 884,676 - Echvi_0783 0.57 -0.7 884,676 - Echvi_0783 0.57 +1.2 884,677 + Echvi_0783 0.57 -2.4 884,677 + Echvi_0783 0.57 -0.4 884,684 + Echvi_0783 0.57 -0.8 884,685 - Echvi_0783 0.57 -0.7 884,707 + Echvi_0783 0.59 -2.0 884,807 + Echvi_0783 0.65 -1.3 884,807 + Echvi_0783 0.65 -0.9 884,807 + Echvi_0783 0.65 -1.3 884,965 - Echvi_0783 0.76 -0.3 884,965 - Echvi_0783 0.76 -0.1 884,988 + Echvi_0783 0.77 -0.2 884,988 + Echvi_0783 0.77 -2.8 884,989 - Echvi_0783 0.77 +1.0 884,990 + Echvi_0783 0.77 -2.2 884,990 + Echvi_0783 0.77 -2.2 884,994 - Echvi_0783 0.78 +0.3 885,058 - Echvi_0783 0.82 -0.2 885,174 - Echvi_0783 0.90 -0.7 885,185 - -2.1 885,185 - -0.8 885,207 + -4.4 885,207 + -2.0 885,207 + -2.2 885,237 + -1.9 885,241 + -3.4 885,241 + -0.5 885,241 + -1.0 885,242 - -0.2 885,242 - +0.0 885,242 - -0.2 885,242 - -0.5 885,242 - +0.0 885,242 - +1.7 885,242 - -0.1 885,242 - -0.9 885,247 - +0.0 885,350 + -3.9 885,351 - -0.5 885,392 + -2.4 885,471 - +0.3 885,471 - +0.4 885,477 - +1.0 885,525 - +1.5 885,529 - +0.2 885,529 - -0.5 885,539 - -0.8 885,545 - -0.7 885,549 + +1.3 885,550 - +0.1 885,590 + +0.9 885,641 + -0.7 885,687 + +1.3 885,687 + +0.1 885,757 + Echvi_0784 0.12 +0.1 885,835 + Echvi_0784 0.16 -2.0 885,835 + Echvi_0784 0.16 -0.4 885,836 - Echvi_0784 0.16 -0.4 885,917 + Echvi_0784 0.19 -0.4 885,917 + Echvi_0784 0.19 -1.0 885,917 + Echvi_0784 0.19 -0.5 885,918 - Echvi_0784 0.19 +0.0 885,968 - Echvi_0784 0.22 -0.6 885,968 - Echvi_0784 0.22 -0.9 885,968 - Echvi_0784 0.22 -0.9 886,007 + Echvi_0784 0.24 -0.2 886,007 + Echvi_0784 0.24 -2.0 886,017 - Echvi_0784 0.24 -0.0 886,123 - Echvi_0784 0.29 -0.0 886,123 - Echvi_0784 0.29 -1.9 886,123 - Echvi_0784 0.29 -0.4 886,126 + Echvi_0784 0.29 -0.2 886,126 + Echvi_0784 0.29 -1.2 886,181 - Echvi_0784 0.32 +0.4 886,230 - Echvi_0784 0.34 +1.1
Or see this region's nucleotide sequence