Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0612 and Echvi_0613 are separated by 19 nucleotides Echvi_0613 and Echvi_0614 are separated by 155 nucleotides Echvi_0614 and Echvi_0615 overlap by 41 nucleotides Echvi_0615 and Echvi_0616 are separated by 44 nucleotides
Echvi_0612: Echvi_0612 - F0F1-type ATP synthase, subunit a, at 687,067 to 688,095
_0612
Echvi_0613: Echvi_0613 - hypothetical protein, at 688,115 to 688,468
_0613
Echvi_0614: Echvi_0614 - hypothetical protein, at 688,624 to 688,851
_0614
Echvi_0615: Echvi_0615 - Integral membrane protein CcmA involved in cell shape determination, at 688,811 to 689,218
_0615
Echvi_0616: Echvi_0616 - Membrane proteins related to metalloendopeptidases, at 689,263 to 690,141
_0616
Position (kb) 688
689 Strain fitness (log2 ratio) -2
-1
0
1
2 at 688.143 kb on - strand at 688.155 kb on - strand, within Echvi_0613 at 688.155 kb on - strand, within Echvi_0613 at 688.171 kb on - strand, within Echvi_0613 at 688.180 kb on - strand, within Echvi_0613 at 688.241 kb on - strand, within Echvi_0613 at 688.252 kb on + strand, within Echvi_0613 at 688.293 kb on - strand, within Echvi_0613 at 688.424 kb on + strand, within Echvi_0613 at 688.442 kb on + strand at 688.547 kb on + strand at 688.582 kb on - strand at 688.592 kb on - strand at 688.592 kb on - strand at 688.625 kb on + strand at 688.650 kb on + strand, within Echvi_0614 at 688.662 kb on + strand, within Echvi_0614 at 688.684 kb on + strand, within Echvi_0614 at 688.685 kb on - strand, within Echvi_0614 at 688.786 kb on + strand, within Echvi_0614 at 688.786 kb on + strand, within Echvi_0614 at 688.787 kb on - strand, within Echvi_0614 at 688.787 kb on - strand, within Echvi_0614 at 688.790 kb on + strand, within Echvi_0614 at 688.790 kb on + strand, within Echvi_0614 at 688.790 kb on + strand, within Echvi_0614 at 688.791 kb on - strand, within Echvi_0614 at 688.791 kb on - strand, within Echvi_0614 at 688.795 kb on + strand, within Echvi_0614 at 688.857 kb on - strand, within Echvi_0615 at 688.882 kb on + strand, within Echvi_0615 at 689.030 kb on + strand, within Echvi_0615 at 689.030 kb on + strand, within Echvi_0615 at 689.031 kb on - strand, within Echvi_0615 at 689.031 kb on - strand, within Echvi_0615 at 689.031 kb on - strand, within Echvi_0615 at 689.031 kb on - strand, within Echvi_0615 at 689.118 kb on - strand, within Echvi_0615 at 689.118 kb on - strand, within Echvi_0615 at 689.142 kb on - strand, within Echvi_0615 at 689.154 kb on - strand, within Echvi_0615 at 689.167 kb on + strand, within Echvi_0615 at 689.180 kb on - strand at 689.204 kb on - strand at 689.252 kb on - strand at 689.252 kb on - strand at 689.257 kb on + strand at 689.258 kb on - strand at 689.258 kb on - strand at 689.278 kb on - strand at 689.309 kb on + strand at 689.309 kb on + strand at 689.310 kb on - strand at 689.310 kb on - strand at 689.314 kb on + strand at 689.315 kb on - strand at 689.315 kb on - strand at 689.315 kb on - strand at 689.355 kb on + strand, within Echvi_0616 at 689.356 kb on - strand, within Echvi_0616 at 689.356 kb on - strand, within Echvi_0616 at 689.414 kb on - strand, within Echvi_0616 at 689.416 kb on + strand, within Echvi_0616 at 689.417 kb on - strand, within Echvi_0616 at 689.424 kb on + strand, within Echvi_0616 at 689.467 kb on + strand, within Echvi_0616
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 688,143 - -1.4 688,155 - Echvi_0613 0.11 -0.3 688,155 - Echvi_0613 0.11 +0.8 688,171 - Echvi_0613 0.16 -0.6 688,180 - Echvi_0613 0.18 +0.1 688,241 - Echvi_0613 0.36 -1.1 688,252 + Echvi_0613 0.39 -0.4 688,293 - Echvi_0613 0.50 -0.1 688,424 + Echvi_0613 0.87 -1.5 688,442 + +0.1 688,547 + +0.3 688,582 - +0.6 688,592 - +0.1 688,592 - -1.0 688,625 + +0.4 688,650 + Echvi_0614 0.11 +0.2 688,662 + Echvi_0614 0.17 +0.7 688,684 + Echvi_0614 0.26 -0.6 688,685 - Echvi_0614 0.27 +0.5 688,786 + Echvi_0614 0.71 +0.0 688,786 + Echvi_0614 0.71 +1.0 688,787 - Echvi_0614 0.71 +0.3 688,787 - Echvi_0614 0.71 +0.9 688,790 + Echvi_0614 0.73 -2.2 688,790 + Echvi_0614 0.73 +0.8 688,790 + Echvi_0614 0.73 +0.4 688,791 - Echvi_0614 0.73 -0.1 688,791 - Echvi_0614 0.73 -0.2 688,795 + Echvi_0614 0.75 -0.1 688,857 - Echvi_0615 0.11 +0.7 688,882 + Echvi_0615 0.17 -0.1 689,030 + Echvi_0615 0.54 -0.7 689,030 + Echvi_0615 0.54 -0.0 689,031 - Echvi_0615 0.54 +0.2 689,031 - Echvi_0615 0.54 -0.1 689,031 - Echvi_0615 0.54 -0.4 689,031 - Echvi_0615 0.54 +0.5 689,118 - Echvi_0615 0.75 -0.9 689,118 - Echvi_0615 0.75 -0.8 689,142 - Echvi_0615 0.81 +0.9 689,154 - Echvi_0615 0.84 +0.4 689,167 + Echvi_0615 0.87 +0.1 689,180 - -0.4 689,204 - +1.4 689,252 - +0.3 689,252 - +0.5 689,257 + +0.4 689,258 - +0.2 689,258 - -0.3 689,278 - -0.4 689,309 + +1.1 689,309 + +0.0 689,310 - +0.3 689,310 - -0.4 689,314 + +0.9 689,315 - +0.2 689,315 - +0.3 689,315 - +2.0 689,355 + Echvi_0616 0.10 +0.2 689,356 - Echvi_0616 0.11 +1.3 689,356 - Echvi_0616 0.11 +0.9 689,414 - Echvi_0616 0.17 +1.3 689,416 + Echvi_0616 0.17 -0.5 689,417 - Echvi_0616 0.18 -0.1 689,424 + Echvi_0616 0.18 +0.4 689,467 + Echvi_0616 0.23 -0.5
Or see this region's nucleotide sequence