Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0457 and Echvi_0458 overlap by 4 nucleotides Echvi_0458 and Echvi_0459 are separated by 214 nucleotides Echvi_0459 and Echvi_0460 are separated by 94 nucleotides Echvi_0460 and Echvi_0461 are separated by 14 nucleotides
Echvi_0457: Echvi_0457 - Domain of unknown function (DUF1814)., at 500,842 to 501,897
_0457
Echvi_0458: Echvi_0458 - hypothetical protein, at 501,894 to 502,664
_0458
Echvi_0459: Echvi_0459 - Fic/DOC family., at 502,879 to 503,850
_0459
Echvi_0460: Echvi_0460 - hypothetical protein, at 503,945 to 504,829
_0460
Echvi_0461: Echvi_0461 - Site-specific recombinase XerD, at 504,844 to 505,023
_0461
Position (kb) 502
503
504 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 501.893 kb on - strand at 501.901 kb on - strand at 501.924 kb on - strand at 502.843 kb on - strand at 502.863 kb on + strand at 502.863 kb on + strand at 502.863 kb on + strand at 502.863 kb on + strand at 502.863 kb on + strand at 502.863 kb on + strand at 502.867 kb on + strand at 502.884 kb on + strand at 502.884 kb on + strand at 502.884 kb on + strand at 502.895 kb on - strand at 503.068 kb on - strand, within Echvi_0459 at 503.265 kb on - strand, within Echvi_0459 at 503.286 kb on + strand, within Echvi_0459 at 503.286 kb on + strand, within Echvi_0459 at 503.334 kb on - strand, within Echvi_0459 at 504.094 kb on + strand, within Echvi_0460 at 504.503 kb on + strand, within Echvi_0460 at 504.530 kb on + strand, within Echvi_0460 at 504.532 kb on + strand, within Echvi_0460 at 504.532 kb on + strand, within Echvi_0460 at 504.532 kb on + strand, within Echvi_0460 at 504.533 kb on - strand, within Echvi_0460 at 504.573 kb on - strand, within Echvi_0460 at 504.573 kb on - strand, within Echvi_0460 at 504.575 kb on - strand, within Echvi_0460
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 501,893 - -1.7 501,901 - -0.4 501,924 - -2.5 502,843 - +0.5 502,863 + -0.3 502,863 + -0.8 502,863 + -2.5 502,863 + +1.6 502,863 + +0.0 502,863 + +0.1 502,867 + -0.6 502,884 + -0.2 502,884 + -0.6 502,884 + -1.4 502,895 - -2.4 503,068 - Echvi_0459 0.19 -1.3 503,265 - Echvi_0459 0.40 -0.6 503,286 + Echvi_0459 0.42 -1.0 503,286 + Echvi_0459 0.42 -1.4 503,334 - Echvi_0459 0.47 -0.5 504,094 + Echvi_0460 0.17 -0.0 504,503 + Echvi_0460 0.63 +0.6 504,530 + Echvi_0460 0.66 -0.6 504,532 + Echvi_0460 0.66 +3.1 504,532 + Echvi_0460 0.66 -1.0 504,532 + Echvi_0460 0.66 -0.5 504,533 - Echvi_0460 0.66 -0.1 504,573 - Echvi_0460 0.71 -2.4 504,573 - Echvi_0460 0.71 -0.6 504,575 - Echvi_0460 0.71 -0.2
Or see this region's nucleotide sequence