Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0047 and Echvi_0048 are separated by 122 nucleotides Echvi_0048 and Echvi_0049 are separated by 202 nucleotides Echvi_0049 and Echvi_0050 are separated by 12 nucleotides
Echvi_0047: Echvi_0047 - His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 44,410 to 45,468
_0047
Echvi_0048: Echvi_0048 - Pseudouridylate synthases, 23S RNA-specific, at 45,591 to 46,298
_0048
Echvi_0049: Echvi_0049 - ribosomal protein L13, bacterial type, at 46,501 to 46,944
_0049
Echvi_0050: Echvi_0050 - Ribosomal protein S9, at 46,957 to 47,343
_0050
Position (kb) 45
46
47 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 44.601 kb on + strand, within Echvi_0047 at 44.602 kb on - strand, within Echvi_0047 at 44.602 kb on - strand, within Echvi_0047 at 44.606 kb on - strand, within Echvi_0047 at 44.714 kb on - strand, within Echvi_0047 at 44.831 kb on - strand, within Echvi_0047 at 44.873 kb on + strand, within Echvi_0047 at 44.949 kb on - strand, within Echvi_0047 at 44.983 kb on + strand, within Echvi_0047 at 44.984 kb on - strand, within Echvi_0047 at 44.984 kb on - strand, within Echvi_0047 at 45.057 kb on + strand at 45.058 kb on - strand, within Echvi_0047 at 45.076 kb on + strand, within Echvi_0047 at 45.077 kb on - strand, within Echvi_0047 at 45.094 kb on + strand, within Echvi_0047 at 45.095 kb on - strand, within Echvi_0047 at 45.118 kb on - strand, within Echvi_0047 at 45.163 kb on + strand, within Echvi_0047 at 45.164 kb on - strand, within Echvi_0047 at 45.164 kb on - strand, within Echvi_0047 at 45.204 kb on + strand, within Echvi_0047 at 45.362 kb on + strand, within Echvi_0047 at 45.362 kb on + strand, within Echvi_0047 at 45.363 kb on - strand at 45.363 kb on - strand at 45.512 kb on + strand at 45.601 kb on + strand at 45.617 kb on + strand at 45.639 kb on + strand at 45.641 kb on + strand at 45.641 kb on + strand at 45.663 kb on + strand, within Echvi_0048 at 45.663 kb on + strand, within Echvi_0048 at 45.723 kb on + strand, within Echvi_0048 at 45.723 kb on + strand, within Echvi_0048 at 45.883 kb on - strand, within Echvi_0048 at 46.127 kb on + strand, within Echvi_0048 at 46.197 kb on + strand, within Echvi_0048 at 46.328 kb on - strand at 46.333 kb on - strand at 46.392 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 44,601 + Echvi_0047 0.18 -0.9 44,602 - Echvi_0047 0.18 +0.4 44,602 - Echvi_0047 0.18 -1.0 44,606 - Echvi_0047 0.19 -0.0 44,714 - Echvi_0047 0.29 -0.2 44,831 - Echvi_0047 0.40 +0.6 44,873 + Echvi_0047 0.44 +0.7 44,949 - Echvi_0047 0.51 +1.2 44,983 + Echvi_0047 0.54 +0.3 44,984 - Echvi_0047 0.54 +0.9 44,984 - Echvi_0047 0.54 -0.8 45,057 + +0.5 45,058 - Echvi_0047 0.61 +0.4 45,076 + Echvi_0047 0.63 +1.5 45,077 - Echvi_0047 0.63 -0.7 45,094 + Echvi_0047 0.65 +0.5 45,095 - Echvi_0047 0.65 -1.9 45,118 - Echvi_0047 0.67 -0.3 45,163 + Echvi_0047 0.71 -1.0 45,164 - Echvi_0047 0.71 +1.8 45,164 - Echvi_0047 0.71 +1.0 45,204 + Echvi_0047 0.75 -0.5 45,362 + Echvi_0047 0.90 +0.9 45,362 + Echvi_0047 0.90 +1.6 45,363 - +0.3 45,363 - +0.2 45,512 + -0.1 45,601 + -0.9 45,617 + -2.9 45,639 + -1.5 45,641 + -1.9 45,641 + -0.5 45,663 + Echvi_0048 0.10 -1.2 45,663 + Echvi_0048 0.10 -0.9 45,723 + Echvi_0048 0.19 -1.4 45,723 + Echvi_0048 0.19 -1.6 45,883 - Echvi_0048 0.41 +0.1 46,127 + Echvi_0048 0.76 -1.0 46,197 + Echvi_0048 0.86 -3.2 46,328 - +0.1 46,333 - -0.0 46,392 - +0.3
Or see this region's nucleotide sequence