Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4494 and EX28DRAFT_4495 are separated by 85 nucleotides EX28DRAFT_4495 and EX28DRAFT_4496 are separated by 255 nucleotides
EX28DRAFT_4494: EX28DRAFT_4494 - methionine synthase (B12-independent) (EC 2.1.1.14), at 59,774 to 62,035
_4494
EX28DRAFT_4495: EX28DRAFT_4495 - Dienelactone hydrolase and related enzymes, at 62,121 to 62,927
_4495
EX28DRAFT_4496: EX28DRAFT_4496 - uridine phosphorylase, at 63,183 to 63,944
_4496
Position (kb)
62
63 Strain fitness (log2 ratio)
-2
-1
0
1 at 61.251 kb on - strand, within EX28DRAFT_4494 at 61.389 kb on - strand, within EX28DRAFT_4494 at 61.704 kb on - strand, within EX28DRAFT_4494 at 62.076 kb on + strand at 62.077 kb on - strand at 62.092 kb on - strand at 62.198 kb on - strand at 62.198 kb on - strand at 62.467 kb on + strand, within EX28DRAFT_4495 at 62.477 kb on + strand, within EX28DRAFT_4495 at 62.477 kb on + strand, within EX28DRAFT_4495 at 62.477 kb on + strand, within EX28DRAFT_4495 at 62.478 kb on - strand, within EX28DRAFT_4495 at 62.659 kb on + strand, within EX28DRAFT_4495 at 62.740 kb on - strand, within EX28DRAFT_4495 at 62.962 kb on - strand at 62.962 kb on - strand at 62.962 kb on - strand at 62.965 kb on + strand at 62.965 kb on + strand at 62.966 kb on - strand at 62.966 kb on - strand at 62.967 kb on + strand at 63.031 kb on - strand at 63.032 kb on + strand at 63.032 kb on + strand at 63.033 kb on - strand at 63.122 kb on - strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.188 kb on + strand at 63.300 kb on - strand, within EX28DRAFT_4496 at 63.443 kb on + strand, within EX28DRAFT_4496 at 63.712 kb on + strand, within EX28DRAFT_4496 at 63.713 kb on - strand, within EX28DRAFT_4496 at 63.713 kb on - strand, within EX28DRAFT_4496 at 63.765 kb on + strand, within EX28DRAFT_4496 at 63.852 kb on - strand, within EX28DRAFT_4496
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 61,251 - EX28DRAFT_4494 0.65 -0.5 61,389 - EX28DRAFT_4494 0.71 -1.8 61,704 - EX28DRAFT_4494 0.85 -0.5 62,076 + -0.6 62,077 - -0.4 62,092 - -0.0 62,198 - +0.5 62,198 - +1.5 62,467 + EX28DRAFT_4495 0.43 +0.4 62,477 + EX28DRAFT_4495 0.44 +0.3 62,477 + EX28DRAFT_4495 0.44 +0.4 62,477 + EX28DRAFT_4495 0.44 +0.4 62,478 - EX28DRAFT_4495 0.44 +0.6 62,659 + EX28DRAFT_4495 0.67 -0.3 62,740 - EX28DRAFT_4495 0.77 -0.6 62,962 - -0.1 62,962 - +0.1 62,962 - +1.6 62,965 + +0.3 62,965 + +0.1 62,966 - +0.4 62,966 - -0.1 62,967 + +0.1 63,031 - +0.3 63,032 + +0.5 63,032 + -0.3 63,033 - -0.6 63,122 - +0.1 63,182 + +0.1 63,182 + +0.3 63,182 + +0.3 63,182 + +0.0 63,182 + +0.2 63,183 - -0.5 63,183 - -0.1 63,183 - +0.2 63,183 - -0.1 63,183 - -0.1 63,188 + +0.8 63,300 - EX28DRAFT_4496 0.15 +0.3 63,443 + EX28DRAFT_4496 0.34 -0.1 63,712 + EX28DRAFT_4496 0.69 +0.3 63,713 - EX28DRAFT_4496 0.70 +0.7 63,713 - EX28DRAFT_4496 0.70 +0.7 63,765 + EX28DRAFT_4496 0.76 -0.0 63,852 - EX28DRAFT_4496 0.88 +0.4
Or see this region's nucleotide sequence