Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4355 and EX28DRAFT_4356 are separated by 43 nucleotides EX28DRAFT_4356 and EX28DRAFT_4357 are separated by 45 nucleotides
EX28DRAFT_4355: EX28DRAFT_4355 - sugar (Glycoside-Pentoside-Hexuronide) transporter, at 18,649 to 20,073
_4355
EX28DRAFT_4356: EX28DRAFT_4356 - sugar (Glycoside-Pentoside-Hexuronide) transporter, at 20,117 to 21,499
_4356
EX28DRAFT_4357: EX28DRAFT_4357 - Alpha-glucosidases, family 31 of glycosyl hydrolases, at 21,545 to 23,569
_4357
Position (kb) 20
21
22 Strain fitness (log2 ratio) -1
0
1
2 at 19.274 kb on + strand, within EX28DRAFT_4355 at 19.274 kb on + strand, within EX28DRAFT_4355 at 19.283 kb on + strand, within EX28DRAFT_4355 at 19.284 kb on - strand, within EX28DRAFT_4355 at 19.284 kb on - strand, within EX28DRAFT_4355 at 19.286 kb on + strand, within EX28DRAFT_4355 at 19.286 kb on + strand, within EX28DRAFT_4355 at 19.404 kb on + strand, within EX28DRAFT_4355 at 19.405 kb on - strand, within EX28DRAFT_4355 at 19.405 kb on - strand, within EX28DRAFT_4355 at 19.431 kb on - strand, within EX28DRAFT_4355 at 19.431 kb on - strand, within EX28DRAFT_4355 at 19.451 kb on + strand, within EX28DRAFT_4355 at 19.683 kb on - strand, within EX28DRAFT_4355 at 19.919 kb on + strand, within EX28DRAFT_4355 at 19.919 kb on + strand, within EX28DRAFT_4355 at 19.920 kb on - strand, within EX28DRAFT_4355 at 19.920 kb on - strand, within EX28DRAFT_4355 at 20.039 kb on - strand at 20.064 kb on + strand at 20.065 kb on - strand at 20.065 kb on - strand at 20.065 kb on - strand at 20.065 kb on - strand at 20.065 kb on - strand at 20.107 kb on - strand at 20.119 kb on - strand at 20.126 kb on - strand at 20.126 kb on - strand at 20.163 kb on + strand at 20.163 kb on + strand at 20.163 kb on + strand at 20.163 kb on + strand at 20.163 kb on + strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.164 kb on - strand at 20.185 kb on - strand at 20.237 kb on - strand at 20.237 kb on - strand at 20.237 kb on - strand at 20.240 kb on + strand at 20.241 kb on - strand at 20.241 kb on - strand at 20.349 kb on - strand, within EX28DRAFT_4356 at 20.529 kb on + strand, within EX28DRAFT_4356 at 20.574 kb on + strand, within EX28DRAFT_4356 at 20.575 kb on - strand, within EX28DRAFT_4356 at 20.661 kb on + strand, within EX28DRAFT_4356 at 20.661 kb on + strand, within EX28DRAFT_4356 at 20.662 kb on - strand, within EX28DRAFT_4356 at 20.662 kb on - strand, within EX28DRAFT_4356 at 20.662 kb on - strand, within EX28DRAFT_4356 at 20.691 kb on + strand, within EX28DRAFT_4356 at 20.692 kb on - strand, within EX28DRAFT_4356 at 20.700 kb on + strand, within EX28DRAFT_4356 at 20.703 kb on + strand, within EX28DRAFT_4356 at 20.768 kb on - strand, within EX28DRAFT_4356 at 20.853 kb on + strand, within EX28DRAFT_4356 at 20.875 kb on - strand, within EX28DRAFT_4356 at 20.887 kb on + strand, within EX28DRAFT_4356 at 20.887 kb on + strand, within EX28DRAFT_4356 at 20.888 kb on - strand, within EX28DRAFT_4356 at 20.888 kb on - strand, within EX28DRAFT_4356 at 20.932 kb on - strand, within EX28DRAFT_4356 at 20.932 kb on - strand, within EX28DRAFT_4356 at 20.987 kb on - strand, within EX28DRAFT_4356 at 21.118 kb on - strand, within EX28DRAFT_4356 at 21.220 kb on - strand, within EX28DRAFT_4356 at 21.342 kb on + strand, within EX28DRAFT_4356 at 21.373 kb on - strand at 21.416 kb on - strand at 21.455 kb on - strand at 21.467 kb on + strand at 21.468 kb on - strand at 21.487 kb on + strand at 21.488 kb on - strand at 21.488 kb on - strand at 21.488 kb on - strand at 21.500 kb on + strand at 21.501 kb on - strand at 21.503 kb on + strand at 21.504 kb on - strand at 21.504 kb on - strand at 21.550 kb on + strand at 21.551 kb on - strand at 21.557 kb on + strand at 21.557 kb on + strand at 21.558 kb on - strand at 21.558 kb on - strand at 21.558 kb on - strand at 21.696 kb on + strand at 21.762 kb on + strand, within EX28DRAFT_4357 at 21.769 kb on - strand, within EX28DRAFT_4357 at 21.802 kb on - strand, within EX28DRAFT_4357 at 21.870 kb on + strand, within EX28DRAFT_4357 at 21.871 kb on - strand, within EX28DRAFT_4357 at 22.057 kb on + strand, within EX28DRAFT_4357 at 22.274 kb on - strand, within EX28DRAFT_4357 at 22.274 kb on - strand, within EX28DRAFT_4357 at 22.357 kb on - strand, within EX28DRAFT_4357 at 22.470 kb on + strand, within EX28DRAFT_4357
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 19,274 + EX28DRAFT_4355 0.44 +0.4 19,274 + EX28DRAFT_4355 0.44 +0.3 19,283 + EX28DRAFT_4355 0.44 -0.1 19,284 - EX28DRAFT_4355 0.45 -0.1 19,284 - EX28DRAFT_4355 0.45 -0.3 19,286 + EX28DRAFT_4355 0.45 +0.2 19,286 + EX28DRAFT_4355 0.45 -0.3 19,404 + EX28DRAFT_4355 0.53 -0.8 19,405 - EX28DRAFT_4355 0.53 +0.5 19,405 - EX28DRAFT_4355 0.53 +0.1 19,431 - EX28DRAFT_4355 0.55 -0.9 19,431 - EX28DRAFT_4355 0.55 +0.3 19,451 + EX28DRAFT_4355 0.56 +0.0 19,683 - EX28DRAFT_4355 0.73 +0.4 19,919 + EX28DRAFT_4355 0.89 -0.1 19,919 + EX28DRAFT_4355 0.89 -0.6 19,920 - EX28DRAFT_4355 0.89 -0.3 19,920 - EX28DRAFT_4355 0.89 -0.2 20,039 - -0.1 20,064 + -0.7 20,065 - +0.2 20,065 - +0.4 20,065 - +0.2 20,065 - +0.0 20,065 - +0.3 20,107 - -0.4 20,119 - -0.0 20,126 - -0.4 20,126 - -0.1 20,163 + +1.1 20,163 + -0.3 20,163 + +0.1 20,163 + -0.2 20,163 + +0.1 20,164 - +0.2 20,164 - +0.0 20,164 - -1.4 20,164 - -0.4 20,164 - +0.1 20,164 - +1.3 20,185 - -0.3 20,237 - -0.1 20,237 - -0.9 20,237 - +0.6 20,240 + +0.0 20,241 - +2.2 20,241 - -0.1 20,349 - EX28DRAFT_4356 0.17 +0.8 20,529 + EX28DRAFT_4356 0.30 +0.4 20,574 + EX28DRAFT_4356 0.33 +0.8 20,575 - EX28DRAFT_4356 0.33 +0.1 20,661 + EX28DRAFT_4356 0.39 +0.6 20,661 + EX28DRAFT_4356 0.39 -0.1 20,662 - EX28DRAFT_4356 0.39 +0.2 20,662 - EX28DRAFT_4356 0.39 +0.2 20,662 - EX28DRAFT_4356 0.39 -0.2 20,691 + EX28DRAFT_4356 0.42 +0.1 20,692 - EX28DRAFT_4356 0.42 +0.3 20,700 + EX28DRAFT_4356 0.42 +0.6 20,703 + EX28DRAFT_4356 0.42 +0.4 20,768 - EX28DRAFT_4356 0.47 +0.7 20,853 + EX28DRAFT_4356 0.53 -0.1 20,875 - EX28DRAFT_4356 0.55 -0.0 20,887 + EX28DRAFT_4356 0.56 -0.1 20,887 + EX28DRAFT_4356 0.56 -0.4 20,888 - EX28DRAFT_4356 0.56 +0.1 20,888 - EX28DRAFT_4356 0.56 -1.5 20,932 - EX28DRAFT_4356 0.59 -0.2 20,932 - EX28DRAFT_4356 0.59 -0.1 20,987 - EX28DRAFT_4356 0.63 +0.0 21,118 - EX28DRAFT_4356 0.72 +0.9 21,220 - EX28DRAFT_4356 0.80 +0.2 21,342 + EX28DRAFT_4356 0.89 -0.4 21,373 - +0.4 21,416 - -0.1 21,455 - +0.5 21,467 + +0.6 21,468 - +0.3 21,487 + +0.4 21,488 - -0.0 21,488 - -0.2 21,488 - +0.4 21,500 + -0.1 21,501 - +0.1 21,503 + +0.3 21,504 - +0.6 21,504 - +0.3 21,550 + -0.5 21,551 - +0.3 21,557 + -0.3 21,557 + +0.6 21,558 - +0.1 21,558 - -0.4 21,558 - -1.2 21,696 + -0.2 21,762 + EX28DRAFT_4357 0.11 -0.3 21,769 - EX28DRAFT_4357 0.11 -0.0 21,802 - EX28DRAFT_4357 0.13 +0.1 21,870 + EX28DRAFT_4357 0.16 +0.4 21,871 - EX28DRAFT_4357 0.16 -0.0 22,057 + EX28DRAFT_4357 0.25 +0.0 22,274 - EX28DRAFT_4357 0.36 -0.0 22,274 - EX28DRAFT_4357 0.36 +0.7 22,357 - EX28DRAFT_4357 0.40 +0.3 22,470 + EX28DRAFT_4357 0.46 -0.3
Or see this region's nucleotide sequence